G50869


Basic Information

Item Value
gene id G50869
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 18289882 ~ 18290636 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU68004
cttggaatcggttaaaaaattatgattccattggaatcgtttctttattggaatcgtttggaggatttggtttcaaatctgatcatgggttccaaatttaacatgcgcaagttttggtttccgtagcgaccaggtgcttgttgtgttgcagccatggagcacagtaagcggtgcaataagcatgtgacccgtttcaactccacccctcaaagaatcggaattgagaatcgataagaaccggaatcgcaacatggcatcatgactttgcgtaaacatacacgccactttcctaaatggcgtgttattgtacgcattttcagctatccacatgtatgtctacgctgtatacagcagatgtaaacacgcccaccacgtggcctcgccacgttgcgtgttatcgcgagaacgcgatGTACTATGGCGAGAAGAACGTCACACAAAaaggttgggttcaggaaaagaacacaggaaaaggctttagtaactaaacagtgacaaaaacatggaaaataacgacaaaaacatgcttaggaaaacaataaacggttgggtgtaggaaagaaacattgggtaaggcttgaaaaaaaacaaataaaaaaataaaaaaacttgccACACGCGGTACGCAAAcccagctctcctgggtgaaagtcctgtgttttacccatctgcCACCATTTCTTTATACTACTCACTACGgaagaatcgttaaaatccaaacgatgtcCAACCCTAATTAAGAGGACGACTGCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68004 True 755 lncRNA 0.42 1 18289882 18290636

Neighbor

gene id symbol gene type direction distance location
b4galt5 b4galt5,LOC104935810,LOC102792691,LOC100696774 coding downstream 99667 18160174 ~ 18190215 (-)
znf512b znf512b coding downstream 318969 17936494 ~ 17970913 (-)
uckl1b uckl1,LOC102795005,LOC103372048 coding downstream 354211 17915256 ~ 17935671 (-)
nkain4 nkain4,LOC106924573 coding downstream 553054 17689955 ~ 17736828 (-)
LOC120558364 ythdf1,LOC107096006,LOC105906423 coding downstream 607525 17671661 ~ 17682357 (-)
spata2 spata2 coding upstream 44765 18335401 ~ 18340591 (-)
dhx35 dhx35,LOC102790768 coding upstream 313008 18603644 ~ 18611600 (-)
rab5if c10h20orf24,LOC104925093,LOC102790476,LOC103366025,LOC101470883 coding upstream 322693 18613329 ~ 18618762 (-)
plcg1 plcg1 coding upstream 345939 18636575 ~ 18668749 (-)
top1 LOC103366028 coding upstream 380038 18670674 ~ 18686422 (-)
G50867 NA non-coding downstream 5372 18284176 ~ 18284510 (-)
G50848 NA non-coding downstream 49812 18239859 ~ 18240070 (-)
G50808 NA non-coding downstream 232533 18054019 ~ 18057349 (-)
G50803 prpf6,LOC107673318,LOC102793577 non-coding downstream 248478 18040409 ~ 18041404 (-)
G50779 LOC102310871,LOC107096010,LOC102797073 non-coding downstream 503522 17782688 ~ 17786360 (-)
G50872 LOC103364157,LOC108235200,LOC103467481 non-coding upstream 8340 18298976 ~ 18299354 (-)
G50877 NA non-coding upstream 13679 18304315 ~ 18304637 (-)
G50879 NA non-coding upstream 14436 18305072 ~ 18305899 (-)
G50912 NA non-coding upstream 24956 18315592 ~ 18315853 (-)
G50915 NA non-coding upstream 28677 18319313 ~ 18319605 (-)
samd10b samd10,LOC107570869 other downstream 188310 17974293 ~ 18101572 (-)
zbtb46 zbtb46,LOC102795869 other downstream 394800 17835080 ~ 17895082 (-)
G50712 birc7 other downstream 600122 17688115 ~ 17689760 (-)
LOC120559328 smim4 other downstream 1174835 17106834 ~ 17115047 (-)
G50217 fgd3,LOC104966710 other downstream 2006026 16281044 ~ 16283856 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other upstream 584119 18874755 ~ 18886895 (-)
kcnd3 kcnd3,LOC102776651,LOC102303593,LOC100697611,LOC101470631 other upstream 655332 18945968 ~ 19077781 (-)
LOC120558911 LOC103362803,LOC100693258 other upstream 1508569 19799205 ~ 19815318 (-)
LOC120558386 hoxc10,LOC100690382 other upstream 2529535 20820171 ~ 20952518 (-)
fmnl3 fmnl3 other upstream 2877268 21167904 ~ 21199043 (-)

Expression


Co-expression Network