G50912


Basic Information

Item Value
gene id G50912
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 18315592 ~ 18315853 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU68049
agtgtctcccctgtgttttctgaccacggtgggaaatctttagcaggaaacgcttcggcattttgtgtgcaatgctgctccgctgtctgctctggtccctgtgtatgtgcgcgtcgcagagccacccacaaggcagcctctcgggaattaggtcacacaacaaagtagcCTACCATAGTATTGTGTGCAAAGtgccagtcaatttaagtacacgcttaatggtcccatgaaaaacagtgaaaaccggacattttcaaGAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68049 True 262 lncRNA 0.48 1 18315592 18315853

Neighbor

gene id symbol gene type direction distance location
b4galt5 b4galt5,LOC104935810,LOC102792691,LOC100696774 coding downstream 125377 18160174 ~ 18190215 (-)
znf512b znf512b coding downstream 344679 17936494 ~ 17970913 (-)
uckl1b uckl1,LOC102795005,LOC103372048 coding downstream 379921 17915256 ~ 17935671 (-)
nkain4 nkain4,LOC106924573 coding downstream 578764 17689955 ~ 17736828 (-)
LOC120558364 ythdf1,LOC107096006,LOC105906423 coding downstream 633235 17671661 ~ 17682357 (-)
spata2 spata2 coding upstream 19548 18335401 ~ 18340591 (-)
dhx35 dhx35,LOC102790768 coding upstream 287791 18603644 ~ 18611600 (-)
rab5if c10h20orf24,LOC104925093,LOC102790476,LOC103366025,LOC101470883 coding upstream 297476 18613329 ~ 18618762 (-)
plcg1 plcg1 coding upstream 320722 18636575 ~ 18668749 (-)
top1 LOC103366028 coding upstream 354821 18670674 ~ 18686422 (-)
G50879 NA non-coding downstream 9693 18305072 ~ 18305899 (-)
G50877 NA non-coding downstream 10955 18304315 ~ 18304637 (-)
G50872 LOC103364157,LOC108235200,LOC103467481 non-coding downstream 16238 18298976 ~ 18299354 (-)
G50869 NA non-coding downstream 24956 18289882 ~ 18290636 (-)
G50867 NA non-coding downstream 31082 18284176 ~ 18284510 (-)
G50915 NA non-coding upstream 3460 18319313 ~ 18319605 (-)
G50932 NA non-coding upstream 52174 18368027 ~ 18368370 (-)
G50941 NA non-coding upstream 159056 18474909 ~ 18475712 (-)
G50945 NA non-coding upstream 188616 18504469 ~ 18505016 (-)
G50991 NA non-coding upstream 318612 18634465 ~ 18635235 (-)
samd10b samd10,LOC107570869 other downstream 214020 17974293 ~ 18101572 (-)
zbtb46 zbtb46,LOC102795869 other downstream 420510 17835080 ~ 17895082 (-)
G50712 birc7 other downstream 625832 17688115 ~ 17689760 (-)
LOC120559328 smim4 other downstream 1200545 17106834 ~ 17115047 (-)
G50217 fgd3,LOC104966710 other downstream 2031736 16281044 ~ 16283856 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other upstream 558902 18874755 ~ 18886895 (-)
kcnd3 kcnd3,LOC102776651,LOC102303593,LOC100697611,LOC101470631 other upstream 630115 18945968 ~ 19077781 (-)
LOC120558911 LOC103362803,LOC100693258 other upstream 1483352 19799205 ~ 19815318 (-)
LOC120558386 hoxc10,LOC100690382 other upstream 2504318 20820171 ~ 20952518 (-)
fmnl3 fmnl3 other upstream 2852051 21167904 ~ 21199043 (-)

Expression


Co-expression Network