G50932


Basic Information

Item Value
gene id G50932
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 18368027 ~ 18368370 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU68072
gtttttttccagttgctaacaaactaaaatgacatgcatagcacaattatttaaactgacacacagagagcaaaacctcttctcaagtctccaaaactctaaacacattttctgctttacacacattttgcaattcgaaatggcactttttaaatgcactgaacacggttctctgcataagacacaacaatctgacataaagtcacatgtttgccatttcaaaacactgccattcaaaatgacactacatgagcttATTGGCCAACATATGCGCCACCAGGCCAAACACCTCAATGCTtaattgttaccacttcaatcaggaagtaagcactataAAAAGACCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68072 True 344 lncRNA 0.37 1 18368027 18368370

Neighbor

gene id symbol gene type direction distance location
spata2 spata2 coding downstream 27436 18335401 ~ 18340591 (-)
b4galt5 b4galt5,LOC104935810,LOC102792691,LOC100696774 coding downstream 177812 18160174 ~ 18190215 (-)
znf512b znf512b coding downstream 397114 17936494 ~ 17970913 (-)
uckl1b uckl1,LOC102795005,LOC103372048 coding downstream 432356 17915256 ~ 17935671 (-)
nkain4 nkain4,LOC106924573 coding downstream 631199 17689955 ~ 17736828 (-)
dhx35 dhx35,LOC102790768 coding upstream 235274 18603644 ~ 18611600 (-)
rab5if c10h20orf24,LOC104925093,LOC102790476,LOC103366025,LOC101470883 coding upstream 244959 18613329 ~ 18618762 (-)
plcg1 plcg1 coding upstream 268205 18636575 ~ 18668749 (-)
top1 LOC103366028 coding upstream 302304 18670674 ~ 18686422 (-)
ncoa6 ncoa6 coding upstream 318403 18686773 ~ 18700011 (-)
G50915 NA non-coding downstream 48422 18319313 ~ 18319605 (-)
G50912 NA non-coding downstream 52174 18315592 ~ 18315853 (-)
G50879 NA non-coding downstream 62128 18305072 ~ 18305899 (-)
G50877 NA non-coding downstream 63390 18304315 ~ 18304637 (-)
G50872 LOC103364157,LOC108235200,LOC103467481 non-coding downstream 68673 18298976 ~ 18299354 (-)
G50941 NA non-coding upstream 106539 18474909 ~ 18475712 (-)
G50945 NA non-coding upstream 136099 18504469 ~ 18505016 (-)
G50991 NA non-coding upstream 266095 18634465 ~ 18635235 (-)
G51064 NA non-coding upstream 344305 18712675 ~ 18713213 (-)
G51068 sna2 non-coding upstream 370113 18738483 ~ 18740343 (-)
samd10b samd10,LOC107570869 other downstream 266455 17974293 ~ 18101572 (-)
zbtb46 zbtb46,LOC102795869 other downstream 472945 17835080 ~ 17895082 (-)
G50712 birc7 other downstream 678267 17688115 ~ 17689760 (-)
LOC120559328 smim4 other downstream 1252980 17106834 ~ 17115047 (-)
G50217 fgd3,LOC104966710 other downstream 2084171 16281044 ~ 16283856 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other upstream 506385 18874755 ~ 18886895 (-)
kcnd3 kcnd3,LOC102776651,LOC102303593,LOC100697611,LOC101470631 other upstream 577598 18945968 ~ 19077781 (-)
LOC120558911 LOC103362803,LOC100693258 other upstream 1430835 19799205 ~ 19815318 (-)
LOC120558386 hoxc10,LOC100690382 other upstream 2451801 20820171 ~ 20952518 (-)
fmnl3 fmnl3 other upstream 2799534 21167904 ~ 21199043 (-)

Expression


Co-expression Network