G51088


Basic Information

Item Value
gene id G51088
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 18922863 ~ 18928835 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU68268
tacacacacacagacacacacacagacacacacacacacacacacacacacacacacacacacacacacagagtgagggATCATCTATGTACATGCTACATACTGTCACACTCTGGGTAAATAAGTAGTCCTTCTGACAGGACAAGACGTGGGATCACTTCACCCTTTGTGAATCCATTTTAGAAAAAGATGCAGAAGTGACCCAAGGTTGGTGCCTGAGGAAAATGAAACTCCAATCTACACTCATCTCGTAAGATACAGTACATGTTGACTGATTGGTGTGTGAAACAGTTGTGCGCTTGAACACCTGGTGCTTGGAGGATTGACCTTGGTCCTGTTGTTTCTGGCAGCTTGTGACAATATCAGCAGGAAACAACAGCTGTGTGTCTGAGTACTTCCAAGTCTTGCTAAATACTCAGAGATGTTAGCGCCCCGTTATACAGGCTAACGTAACAGttatatactgtactatacaCATTGAAGTTGAGTCAGATTTCTCAAACACACCTTCTGGTCCCAATGCTGGCAGCACATGCCATTGTTGCTGAATACTGTGTTGTCATTGTCTTCATCTTATTTAAGAGTACAGTCTCCAGACTCATTGAGTAGCCATTACAGGTAATGGGGTgtttggtgtaaaaaaaaaaaaatggaggtattccttttccagcagcagccattTCACATACCAACTGAGTGTTTTTAATACACAAACATGCTTGAAGTAGATGACAAGTAAAGACATGGGTAAAATAGTCACAGAACAGCTATATTATGGTCAAATTAACAGAGTACGAATGACACAGAAGACTGACAGGTTGATGCTGAGAAATGACTCTTCTCCTTCACGTACAGTTTTAATTAGCTTTGCAAAAGGGTTTCAAGTCATGTAAGACATACTCTGCTCTACTGGGGAGACGAGACCAGTTGTACCTCAAAGCATCCACGAAAACAACACTAGCAATAAGTCCTGAGCTCAAGGAATGTGCAACACGTCCCCAGCCAGTCACCACACTGTTCCCCTGGGAACACAGGAAAGACTGAGAACAGCATCCTAAAAGTATCATTGCTTCTGACAGGTAAAAAGTATGGTCATATATAcagatttaagaaaaaaaaaaagaaatgagtaAAAAGAAATGCAAGTAAAGTTGAGCGGGAGAGGTTTGGGGTTGTTCAATTGTCTATGATCTAAAGAGGTAAAATCAGGTGCAAAGAGAAcgtttcaacatcaacacctgTACATCACACAACAAATCAAGACAACTTCTGAGTCAATGCAAAAAAGGAAAGGTGGTGTCTAAGAGTAAGCAGGCGAGAATTTGTACATTTTCCTAAACTCTGTGTCCATACAGGTTGTCCTTCTTGGGTACTGAGACAGCAGCGTCTTGCAGCATAGTGTTCTTTACAGCGTGTGAGCATGTGACAAATGCAAATATTGCTACTACTGGTttgagagtgtttttttttttttagtgtagCATAGTGTCCAATTCCATCGGTGAATCCATACATCTGTCCTATATGGTTAGGGAgttgttgtttctgttttttggtttgttatttTGATTCTTCTTCATTCTAATATCTAGCATGTACTTTACATCCTACTCTGCTTGAGTGACTGATGAGGTAACGTAATGACAGCCAACATGATCTCTACTGGACAATAAGGTGCTAAAGTTTATCTCTGTAAACGCCATTGATCTACACACTTAACTTTCAAGtgaatcatgtgtgtgtgtgtgtgtgtgtgtatttaagagagatagagacatagaatgagagaaaaagagagagagagattgagtctgtgtgttgttttaaaGATCATGTAATAAAGGGCCAAGAGGTTAGGCGAGGTTGGGTGCAATATTCAGTGTTTGGATTCAGGCTGAGGCGTGTTATGAAAAAGCAGAGTTCTATAGCTCAGTCTCTTTATGTACAGCAacagtctgaaaaaaaaaaaaagagaaagtgaccggtttcctctctttctttgccTTTGAACCACGTCCACTTCTCACTCCTCCTTCCTCACAGCTCACTGATGCAGCAAGTTCTGTTCAAAAACCGAGTCAGCCCTCCTCCCAAACGCTGCCCTCTTCTGGACAGCAGCGGTAGTAGCAGCAAGGAGAATCTTGTACTCTCCCACTTTTCTTCCAGCATCTGTGCACTtctctcattttttttattttttttctgtctttaggATTGGGCTAagtcttatttattatttttgtcaaGTAGAAATTCTTCTTCTCTAAATTCTGTGTGGTTTTGTTTCCATGTTGCTGTACGtatgtgtgttttcttcttcaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtttatgtggcAGGATGTGTGTCtctccttcagtgtgtgtgtggcagggtCAGTGAATGTATGTCTGACAGGACAGCTCCACGTGTCACTGTCCTCCTCACCTCAGCGCCCCCGCCAGCACTAAAACAACACACTCTGCCTCCTGCTCTTCCCCtgggTTGACTCTGGGTGGACTGAGGATCTCTTCCCTGGATCTTTCTGGAGTTGAATGCCTTTTACAGAGAAGATGGATGCAGCTGAAAACAACAGAGATGGTTGGTGAGACAGTGTTTGTACAGTACAGTTTAATGTGTCAGATTGTGTGTACTCACTGTCAGCCAGTGTTTGAACCTGCTCcccaaaacatttgaaatacGAGTGTCTGAGAGCATCCTCAGCTGATACCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68268 True 2786 lncRNA 0.42 2 18922863 18928835

Neighbor

gene id symbol gene type direction distance location
si:ch211-117c9.5 slc6a8,LOC101473935,LOC102296397,LOC106523826,LOC103370863,LOC102778284 coding downstream 49694 18855940 ~ 18873169 (-)
LOC120559674 LOC103370862 coding downstream 96091 18818842 ~ 18826772 (-)
LOC120559673 LOC104946588,LOC103370859 coding downstream 105033 18801947 ~ 18817830 (-)
samhd1 samhd1 coding downstream 135580 18775750 ~ 18787283 (-)
LOC120558486 tp53inp2 coding downstream 199654 18713626 ~ 18723209 (-)
parapinopsina LOC103370869,LOC104963629 coding upstream 2140 18930975 ~ 18933494 (-)
capza1b capza1,LOC104955722,LOC103367229 coding upstream 292185 19221020 ~ 19225831 (-)
cacna2d3a LOC103362818,LOC101467919 coding upstream 509793 19438628 ~ 19575574 (-)
atp6ap1lb LOC104933206,LOC103362820,LOC100695140,LOC101467308 coding upstream 659449 19588284 ~ 19602069 (-)
b4galt3 LOC103362816,LOC104933217,LOC104966142 coding upstream 675921 19604756 ~ 19614597 (-)
G51069 NA non-coding downstream 164362 18758042 ~ 18758501 (-)
G51068 sna2 non-coding downstream 182520 18738483 ~ 18740343 (-)
G51064 NA non-coding downstream 209650 18712675 ~ 18713213 (-)
G50991 NA non-coding downstream 287628 18634465 ~ 18635235 (-)
G50945 NA non-coding downstream 417847 18504469 ~ 18505016 (-)
G51122 apeh,LOC103467450 non-coding upstream 298486 19227321 ~ 19227905 (-)
G51147 NA non-coding upstream 398817 19327652 ~ 19415195 (-)
G51228 lrtm1,LOC102799284 non-coding upstream 527817 19456652 ~ 19459405 (-)
G51236 NA non-coding upstream 666759 19595594 ~ 19597508 (-)
G51266 NA non-coding upstream 896576 19825411 ~ 19850660 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other downstream 35968 18874755 ~ 18886895 (-)
samd10b samd10,LOC107570869 other downstream 821291 17974293 ~ 18101572 (-)
zbtb46 zbtb46,LOC102795869 other downstream 1027781 17835080 ~ 17895082 (-)
G50712 birc7 other downstream 1233103 17688115 ~ 17689760 (-)
LOC120559328 smim4 other downstream 1807816 17106834 ~ 17115047 (-)
kcnd3 kcnd3,LOC102776651,LOC102303593,LOC100697611,LOC101470631 other upstream 17133 18945968 ~ 19077781 (-)
LOC120558911 LOC103362803,LOC100693258 other upstream 870370 19799205 ~ 19815318 (-)
LOC120558386 hoxc10,LOC100690382 other upstream 1891336 20820171 ~ 20952518 (-)
fmnl3 fmnl3 other upstream 2239069 21167904 ~ 21199043 (-)
esyt1a LOC104932417,LOC104956886,LOC103356920 other upstream 2270505 21199340 ~ 21216719 (-)

Expression


Co-expression Network