G51236


Basic Information

Item Value
gene id G51236
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 19595594 ~ 19597508 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU68468
acacatccaagtTTTAGCCAATTTAGCCAGTTGATGAGCTTGTATGGAAATTGCAGCATAGTACCTCCCTGCTGATCATTTACTCGTTCACATTCTACAGACATCTGTTTAACTGGACTGAAGCttaatttaatttgaatttGATTTATTGAGAAAAGAAACATCCATACTCTCAAGCTGTGTAATAGGTGATCTGAAACAAAGTCAATGGCATCGAAAAGAGTAGCCTGCATCTACATGTTGCATACCATGAGCTTGTCTTACTGCAGAATTTGATCCTGTGTATGAATCTGTTTTCTCATTCTCACTCTGCTTTACCCATTCAATTGAGAACATTGAGTATTTCATGGAAAAGACAATATTagcaacattgttttattacaaaaagtaGGTTGACATTGTTCCTCATAGATCACTCAACTACAGTATTGGGGCAGCTCCAAAAATGTCTGGttcagagaaacaaagtgtaaaCAGTCCTTATCACAGCTATTGGGATGTATTAGCTTTTGTGTGTTTAATAAACATCCAGGTCATCCTCAGTCTATCTTGTGTATCTACTAAAAAGGCCTTCCCTACAAGATCTAAACTAAAGATAACAAAGATAATATCAATCACTGATATAGGTCTTTACAGACATTGCTTTTGTTGTGCTGCAATTCATAAAATGATTTGAAATACTTAAGACCAAAGCTGATAAACAGACAGACTGAAGGAGTGCCAAGGGACgtgacacaaaaagacacaagcTAGTTGTCATGTCCACTCCCACAGGTTTTAGG

Function

NR:

description
hypothetical protein cypCar_00036760, partial

GO: NA

KEGG:

id description
ko04721 Synaptic vesicle cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU68468 True 782 lncRNA 0.37 2 19595594 19597508

Neighbor

gene id symbol gene type direction distance location
cacna2d3a LOC103362818,LOC101467919 coding downstream 20020 19438628 ~ 19575574 (-)
capza1b capza1,LOC104955722,LOC103367229 coding downstream 369763 19221020 ~ 19225831 (-)
parapinopsina LOC103370869,LOC104963629 coding downstream 662100 18930975 ~ 18933494 (-)
si:ch211-117c9.5 slc6a8,LOC101473935,LOC102296397,LOC106523826,LOC103370863,LOC102778284 coding downstream 722425 18855940 ~ 18873169 (-)
LOC120559674 LOC103370862 coding downstream 768822 18818842 ~ 18826772 (-)
b4galt3 LOC103362816,LOC104933217,LOC104966142 coding upstream 7248 19604756 ~ 19614597 (-)
bgnb bgn coding upstream 18138 19615646 ~ 19632023 (-)
si:dkey-32e6.6 LOC104956310 coding upstream 39506 19637014 ~ 19649377 (-)
tktb LOC104956237,LOC103362814,LOC108235280,LOC101069588 coding upstream 53730 19651238 ~ 19662853 (-)
lrrc23 lrrc23 coding upstream 65864 19663372 ~ 19667912 (-)
G51228 lrtm1,LOC102799284 non-coding downstream 136189 19456652 ~ 19459405 (-)
G51147 NA non-coding downstream 180399 19327652 ~ 19415195 (-)
G51122 apeh,LOC103467450 non-coding downstream 367689 19227321 ~ 19227905 (-)
G51088 NA non-coding downstream 666759 18922863 ~ 18928835 (-)
G51069 NA non-coding downstream 837093 18758042 ~ 18758501 (-)
G51266 NA non-coding upstream 227903 19825411 ~ 19850660 (-)
G51468 NA non-coding upstream 465600 20063108 ~ 20063536 (-)
G51467 NA non-coding upstream 468354 20065862 ~ 20073593 (-)
G51518 NA non-coding upstream 701543 20299051 ~ 20300666 (-)
LOC120558923 NA non-coding upstream 770478 20367986 ~ 20382875 (-)
kcnd3 kcnd3,LOC102776651,LOC102303593,LOC100697611,LOC101470631 other downstream 517813 18945968 ~ 19077781 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other downstream 708699 18874755 ~ 18886895 (-)
samd10b samd10,LOC107570869 other downstream 1494022 17974293 ~ 18101572 (-)
zbtb46 zbtb46,LOC102795869 other downstream 1700512 17835080 ~ 17895082 (-)
G50712 birc7 other downstream 1905834 17688115 ~ 17689760 (-)
LOC120558911 LOC103362803,LOC100693258 other upstream 201697 19799205 ~ 19815318 (-)
LOC120558386 hoxc10,LOC100690382 other upstream 1222663 20820171 ~ 20952518 (-)
fmnl3 fmnl3 other upstream 1570396 21167904 ~ 21199043 (-)
esyt1a LOC104932417,LOC104956886,LOC103356920 other upstream 1601832 21199340 ~ 21216719 (-)
si:dkey-151g10.3 wnk3 other upstream 2372544 21970052 ~ 22015043 (-)

Expression


Co-expression Network