G51467


Basic Information

Item Value
gene id G51467
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 20065862 ~ 20073593 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU68775
TGGCAGCAGTGCCAAAGTGGGCAGGCGGACTGAGGCAAACACAGCACAGGGCAGAGCAGAGGGCGAACCAAAGGCTGGCGAATTGattatgtGGCTGTGTGAGAGCAGACGTCCCTCTGTCACCCAGTGTACGGACAGACGCACTCACGCCAGTAGGAGGGGATTGTGGGAAGGGGGTGTAGCTCTCAGAGGGTGTGCTCTACTCCTCTCTTTTCCCTTCTTCCCGCCATCACGGCCCTCTTCTCCTCCAGTCCTCTGGCCCAGCCCGGCGCTCACATACAGGCTCcagGACAGTTACCTTTGTGGATCTTTGAAGTGGAACCAACGTGGATGCTGTCCTTGGGGCTGAGGTAGTAGATTGAATAGTTGTGGGGTTATGTAACCTCTTTTTGAGATAACTATACAATCTACTGTCTTTCCCAAGGAGACAGCTGAGTCAGCCACTCGCCGACTGTCATTTCCAGATGGAAAATCATGTCGTCCAATTAAAATGTCCGCTTGCAGCAATCAACATAATGCACTGTGTCAACCATTGTTTAGCTAGAGCAGGTAAATTAGGTTTCATCTTCCCTAACAGGACGTGAACGTGTGGTGTGTTTGATTTCAGCTCTGTCAGGGTGAGGTAGTAGGTTGTATAGTTTGGTGGGTGGGATTGCACCCTGCTCAGGTGATAACTATACAGTCTATTGCCTTCCCTGAGGAGCTCGCTGAACACTCATGAATGCTCAACACACTCTCGTAATAGtatcacatttatttatagATTATTTAGAAAAGAGCAAGTAGATATGTGCAGCAAAAGGTTAGTGATAAATTAATTGAAGCTGTCAAATTACAATAATATGTACGTCTTAATAAAGTCA
>TU68777
TGGCAGCAGTGCCAAAGTGGGCAGGCGGACTGAGGCAAACACAGCACAGGGCAGAGCAGAGGGCGAACCAAAGGCTGGCGAATTGattatgtGGCTGTGTGAGAGCAGACGTCCCTCTGTCACCCAGTGTACGGACAGACGCACTCACGCCAGTAGGAGGGGATTGTGGGAAGGGGGTGTAGCTCTCAGAGGGTGTGCTCTACTCCTCTCTTTTCCCTTCTTCCCGCCATCACGGCCCTCTTCTCCTCCAGTCCTCTGGCCCAGCCCGGCGCTCACATACAGGCTCcagGAATCAGGCATTCTTTAGGGAGTGGGGAAGGTGATAAAGCAGGTATGATAAAATCACCATAGCGCTCCATTGAGGATCAGCCCTCTTATATCTGCCAGATGCCTGCACAAAGTTTTTCTCCAGACTAAGACTGGACAAAGCTTCCCCACCgctcctccttctctttgccCACCATCACCACCTCCTTCTTCCCTCATTGAAATTCTGCCTGGCACACACTGCCCATTCTTGGCACAaagctcagagagagagagaaacacacaagaACCTGTACCAATCGTGTGGTGCCCCCTCCGTTGTGTCTGCCAAGCATTCATCCCATCTTGCGGACCAAGGGACCAGGCAAACCAATAGGACAGTTACCTTTGTGGATCTTTGAAGTGGAACCAACGTGGATGCTGTCCTTGGGGCTGAGGTAGTAGATTGAATAGTTGTGGGGTTATGTAACCTCTTTTTGAGATAACTATACAATCTACTGTCTTTCCCAAGGAGACAGCTGAGTCAGCCACTCGCCGACTGTCATTTCCAGATGGAAAATCATGTCGTCCAATTAAAATGTCCGCTTGCAGCAATCAACATAATGCACTGTGTCAACCATTGTTTAGCTAGAGCAGGTAAATTAGGTTTCATCTTCCCTAACAGGACGTGAACGTGTGGTGTGTTTGATTTCAGCTCTGTCAGGGTGAGGTAGTAGGTTGTATAGTTTGGTGGGTGGGATTGCACCCTGCTCAGGTGATAACTATACAGTCTATTGCCTTCCCTGAGGAGCTCGCTGAACACTCATGAATGCTCAACACACTCTCGTAATAGtatcacatttatttatagATTATTTAGAAAAGAGCAAGTAGATATGTGCAGCAAAAGGTTAGTGATAAATTAATTGAAGCTGTCAAATTACAATAATATGTACGTCTTAATAAAGTCA
>TU68779
CGGCCATTTATGAACAGATGGATTTATGTTTTCTCTCCTAATGATTGGGGTCATCTAGAGGCGACAGCTCGCTGATCCAAGATCTGCATTGGTGTTCAACTCTCTTGCTGGTGTGAGAAAGCAAAGGGAGACCTGGGAAAGATGCCAACGGCTAacgagagaaaaaaagtgacattctCTGAAATATCCACCCTCCTCGCTCATTGATTCATTTAGCTAAACTCCCTCAAAcccctcccaccgaggagggCAGATATTATCCCCGATGGAGGGAGAGGACAAATTTgcagaaggatggagggagacaCGGAGAAAAGCCGACGAAActgtgtcgaaaaaagagacTCCTCTTTGAGGGCTGTGTGAGAGCAGACGTCCCTCTGTCACCCAGTGTACGGACAGACGCACTCACGCCAGTAGGAGGGGATTGTGGGAAGGGGGTGTAGCTCTCAGAGGGTGTGCTCTACTCCTCTCTTTTCCCTTCTTCCCGCCATCACGGCCCTCTTCTCCTCCAGTCCTCTGGCCCAGCCCGGCGCTCACATACAGGCTCcagGACAGTTACCTTTGTGGATCTTTGAAGTGGAACCAACGTGGATGCTGTCCTTGGGGCTGAGGTAGTAGATTGAATAGTTGTGGGGTTATGTAACCTCTTTTTGAGATAACTATACAATCTACTGTCTTTCCCAAGGAGACAGCTGAGTCAGCCACTCGCCGACTGTCATTTCCAGATGGAAAATCATGTCGTCCAATTAAAATGTCCGCTTGCAGCAATCAACATAATGCACTGTGTCAACCATTGTTTAGCTAGAGCAGGTAAATTAGGTTTCATCTTCCCTAACAGGACGTGAACGTGTGGTGTGTTTGATTTCAGCTCTGTCAGGGTGAGGTAGTAGGTTGTATAGTTTGGTGGGTGGGATTGCACCCTGCTCAGGTGATAACTATACAGTCTATTGCCTTCCCTGAGGAGCTCGCTGAACACTCATGAATGCTCAACACACTCTCGTAATAGtatcacatttatttatagATTATTTAGAAAAGAGCAAGTAGATATGTGCAGCAAAAGGTTAGTGATAAATTAATTGAAGCTGTCAAATTACAATAATATGTACGTCTTAATAAAGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68775 False 863 lncRNA 0.47 3 20065862 20072831
TU68777 True 1217 lncRNA 0.48 5 20065862 20072831
TU68779 False 1127 lncRNA 0.47 3 20065862 20073593

Neighbor

gene id symbol gene type direction distance location
LOC120558880 lgr6 coding downstream 24424 20004202 ~ 20041438 (-)
etv7 LOC102788405 coding downstream 69522 19990916 ~ 19996340 (-)
LOC120558903 NA coding downstream 76867 19984434 ~ 19988995 (-)
ngfa ngf,LOC107390964,LOC103362802,LOC104931860 coding downstream 242209 19822643 ~ 19823653 (-)
camkvl LOC104956158 coding downstream 312423 19716768 ~ 19753439 (-)
tnnt2a tnnt2 coding upstream 47252 20120845 ~ 20134632 (-)
lad1 NA coding upstream 61344 20134937 ~ 20142081 (-)
tnni1a tnni1,LOC108235179,LOC101156408,LOC103384557 coding upstream 70329 20143922 ~ 20149234 (-)
phlda3 phlda3,LOC101480121 coding upstream 81800 20155393 ~ 20157359 (-)
csrp1a csrp1,LOC102794587 coding upstream 85061 20158654 ~ 20168891 (-)
G51468 NA non-coding downstream 2326 20063108 ~ 20063536 (-)
G51266 NA non-coding downstream 215202 19825411 ~ 19850660 (-)
G51236 NA non-coding downstream 468354 19595594 ~ 19597508 (-)
G51228 lrtm1,LOC102799284 non-coding downstream 606457 19456652 ~ 19459405 (-)
G51147 NA non-coding downstream 650667 19327652 ~ 19415195 (-)
G51518 NA non-coding upstream 225458 20299051 ~ 20300666 (-)
LOC120558923 NA non-coding upstream 294393 20367986 ~ 20382875 (-)
G51544 NA non-coding upstream 367903 20441496 ~ 20441807 (-)
LOC120558476 NA non-coding upstream 588760 20662353 ~ 20663577 (-)
G51574 NA non-coding upstream 649057 20722650 ~ 20722998 (-)
LOC120558911 LOC103362803,LOC100693258 other downstream 250544 19799205 ~ 19815318 (-)
kcnd3 kcnd3,LOC102776651,LOC102303593,LOC100697611,LOC101470631 other downstream 988081 18945968 ~ 19077781 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other downstream 1178967 18874755 ~ 18886895 (-)
samd10b samd10,LOC107570869 other downstream 1964290 17974293 ~ 18101572 (-)
zbtb46 zbtb46,LOC102795869 other downstream 2170780 17835080 ~ 17895082 (-)
LOC120558386 hoxc10,LOC100690382 other upstream 746578 20820171 ~ 20952518 (-)
fmnl3 fmnl3 other upstream 1094311 21167904 ~ 21199043 (-)
esyt1a LOC104932417,LOC104956886,LOC103356920 other upstream 1125747 21199340 ~ 21216719 (-)
si:dkey-151g10.3 wnk3 other upstream 1896459 21970052 ~ 22015043 (-)
LOC120559880 LOC104932903,LOC103358260,LOC104967532,LOC107390844 other upstream 2149556 22223149 ~ 22229421 (-)

Expression


Co-expression Network