G51620


Basic Information

Item Value
gene id G51620
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 21037082 ~ 21041944 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU68973
gggtgtagaaatatattgggtttagaataagaatgtcctgtagcctgggatggcctcgctgtctcctcctgtctggcatgtgtaagataagatttagtggagcaaaagtgctcctcatttgtttaataaacaattggaacagaatgcacctaatgaaatctcttaaaggaacagacaatctctagcgcgcaacttctctatcttctcggagacagaaagtcggagtgatatccaaccaattggcggCGCACACGCAATGGCggaaggaggaacctgaagatgaataaaagaatagggaaaaggaaggtccggtgtcagacccggaaagactttgttggtggttagggagagaaagtctcgaaggagcggctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68973 True 372 lncRNA 0.46 2 21037082 21041944

Neighbor

gene id symbol gene type direction distance location
rarga rarg coding downstream 30814 20963746 ~ 21006268 (-)
hoxc13a hoxc13 coding downstream 126665 20906056 ~ 20910417 (-)
hoxc12a hoxc12,LOC108235205,LOC107390914 coding downstream 137947 20895268 ~ 20899135 (-)
hoxc11a hoxc11 coding downstream 150830 20882028 ~ 20886252 (-)
hoxc9a hoxc9 coding downstream 172759 20861762 ~ 20864323 (-)
rbms2b LOC104956888,LOC103362050,LOC102783848,LOC102303282 coding upstream 6900 21048844 ~ 21066026 (-)
LOC120559628 LOC108235222,LOC103385139,LOC106524753,LOC103362054 coding upstream 97959 21139903 ~ 21141062 (-)
pa2g4b LOC104932430,LOC103356918,LOC101170587,LOC101465390 coding upstream 182135 21224079 ~ 21233429 (-)
erbb3b LOC103356917 coding upstream 192322 21234266 ~ 21248157 (-)
arf3a arf3,ARF3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 coding upstream 208757 21250701 ~ 21255464 (-)
G51614 NA non-coding downstream 5383 21025133 ~ 21031699 (-)
G51589 hoxc10,hoxc8,hoxc11,LOC102193660,LOC100690382,LOC101470732,LOC103467376,LOC102786831,LOC106947643,LOC106565461,LOC105016991,LOC103385114 non-coding downstream 84300 20862226 ~ 20952782 (-)
G51577 NA non-coding downstream 311181 20725627 ~ 20725901 (-)
G51574 NA non-coding downstream 314084 20722650 ~ 20722998 (-)
LOC120558476 NA non-coding downstream 373505 20662353 ~ 20663577 (-)
G51606 NA non-coding upstream 4105 21046049 ~ 21048786 (-)
G51673 NA non-coding upstream 124778 21166722 ~ 21167748 (-)
LOC120559347 NA non-coding upstream 178023 21219967 ~ 21222632 (-)
G51721 NA non-coding upstream 249202 21291146 ~ 21293845 (-)
G51767 NA non-coding upstream 352498 21394442 ~ 21395700 (-)
LOC120558386 hoxc10,LOC100690382 other downstream 84564 20820171 ~ 20952518 (-)
LOC120558911 LOC103362803,LOC100693258 other downstream 1221764 19799205 ~ 19815318 (-)
kcnd3 kcnd3,LOC102776651,LOC102303593,LOC100697611,LOC101470631 other downstream 1959301 18945968 ~ 19077781 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other downstream 2150187 18874755 ~ 18886895 (-)
samd10b samd10,LOC107570869 other downstream 2935510 17974293 ~ 18101572 (-)
fmnl3 fmnl3 other upstream 125960 21167904 ~ 21199043 (-)
esyt1a LOC104932417,LOC104956886,LOC103356920 other upstream 157396 21199340 ~ 21216719 (-)
si:dkey-151g10.3 wnk3 other upstream 928108 21970052 ~ 22015043 (-)
LOC120559880 LOC104932903,LOC103358260,LOC104967532,LOC107390844 other upstream 1181205 22223149 ~ 22229421 (-)
G52226 NA other upstream 1487662 22529606 ~ 22530708 (-)

Expression


Co-expression Network