G51673


Basic Information

Item Value
gene id G51673
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 21166722 ~ 21167748 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU69031
aaaggtgaggtGAGGACTGGCGGACCAAAAAAGCAGGAAGAACTTTGCTTTCAGTAACAAGCGCCTGCCAGCATGTGGATCTTATTCCCCAAGACCGTTATTTTCCTCAGATTATGCAGTCGTAGCAGGACTTAGACTGGGAGCCAGCCAGGGGAAGATGCCTTCTCTGCTGCTGGGATGTTTGCCTTGAAGAGACTTGCAAAACCTTCCTCCAAATAACAGAGAAGCTTCAATATTATTATGAGACATTTGGGGACGGTTTCCTAACTTTAAGCCAAGTGAACACATTCAATCAAGACTTAATATTGATAATTTAGATTTCAGTCGCATGTATCTGGGAGGAAAGACCATAGATTCTTTTGGACAGCTAGCCAAACCAAAATTTCTCCAATGTCTCTTGTTTTGCTTAAAAAGTGCCTTTTTATGTGTAAACAGTGTTATTTGTCACGAGTCAGCCATAATTTGTTTTACATCTTTCATTtgtaaaatattgtattttgtattgccTTGTTCTATAACATCAGTCTTATAATACTGACAATATGCAGAGGTTGAAATTTCAAGCTTTAAAATCTTACAGCTAGAAGGCCAGGGGAATAATGATTTTAAGATTACTCTTTTTATTTACCTCTCTAGTACATCAGTGTCTTTGAGCTCACGATTGACATTTCTTTGTGCCTTGTCCAAGTAGTTCTTAAAAACTGAATGTTATACGCCTTGACAACACTTCCCGCACATTTTAAGTGACATTTTGGAAGTGACAAATGTATGAAGAAGATTCCACATGGACTGCTGTTTAAGGGCCCAAATTACGTTAACCTGCTATAGAAGTGGTGATGGATTGAAGGATGTTTCCATTCCTATGAGGTCTTATGGTTTAAGCTTTTTTATCTTCTCTGTTTAAATAGAGACAATGTGTTTCCTCCTAACAGCTATTGAAACTTACATGACATTGGCACAAAAGGGGCTGATACATCTTTACACTACTTAATTTGGCTCAACATTGTATGAGACACTATTCTTTCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69031 True 1027 lncRNA 0.38 1 21166722 21167748

Neighbor

gene id symbol gene type direction distance location
LOC120559628 LOC108235222,LOC103385139,LOC106524753,LOC103362054 coding downstream 25660 21139903 ~ 21141062 (-)
rbms2b LOC104956888,LOC103362050,LOC102783848,LOC102303282 coding downstream 100696 21048844 ~ 21066026 (-)
rarga rarg coding downstream 160454 20963746 ~ 21006268 (-)
hoxc13a hoxc13 coding downstream 256305 20906056 ~ 20910417 (-)
hoxc12a hoxc12,LOC108235205,LOC107390914 coding downstream 267587 20895268 ~ 20899135 (-)
pa2g4b LOC104932430,LOC103356918,LOC101170587,LOC101465390 coding upstream 56331 21224079 ~ 21233429 (-)
erbb3b LOC103356917 coding upstream 66518 21234266 ~ 21248157 (-)
arf3a arf3,ARF3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 coding upstream 82953 21250701 ~ 21255464 (-)
wnt10b wnt10b,LOC102780570 coding upstream 90513 21258261 ~ 21277735 (-)
ikzf4 LOC103356912,LOC106096427,LOC104956881 coding upstream 114209 21281957 ~ 21291146 (-)
G51606 NA non-coding downstream 117936 21046049 ~ 21048786 (-)
G51620 NA non-coding downstream 124778 21037082 ~ 21041944 (-)
G51614 NA non-coding downstream 135023 21025133 ~ 21031699 (-)
G51589 hoxc10,hoxc8,hoxc11,LOC102193660,LOC100690382,LOC101470732,LOC103467376,LOC102786831,LOC106947643,LOC106565461,LOC105016991,LOC103385114 non-coding downstream 213940 20862226 ~ 20952782 (-)
G51577 NA non-coding downstream 440821 20725627 ~ 20725901 (-)
LOC120559347 NA non-coding upstream 52219 21219967 ~ 21222632 (-)
G51721 NA non-coding upstream 123398 21291146 ~ 21293845 (-)
G51767 NA non-coding upstream 226694 21394442 ~ 21395700 (-)
G51834 NA non-coding upstream 330396 21498144 ~ 21503262 (-)
LOC120559689 NA non-coding upstream 345255 21513003 ~ 21515984 (-)
LOC120558386 hoxc10,LOC100690382 other downstream 214204 20820171 ~ 20952518 (-)
LOC120558911 LOC103362803,LOC100693258 other downstream 1351404 19799205 ~ 19815318 (-)
kcnd3 kcnd3,LOC102776651,LOC102303593,LOC100697611,LOC101470631 other downstream 2088941 18945968 ~ 19077781 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other downstream 2279827 18874755 ~ 18886895 (-)
samd10b samd10,LOC107570869 other downstream 3065150 17974293 ~ 18101572 (-)
fmnl3 fmnl3 other upstream 156 21167904 ~ 21199043 (-)
esyt1a LOC104932417,LOC104956886,LOC103356920 other upstream 31592 21199340 ~ 21216719 (-)
si:dkey-151g10.3 wnk3 other upstream 802304 21970052 ~ 22015043 (-)
LOC120559880 LOC104932903,LOC103358260,LOC104967532,LOC107390844 other upstream 1055401 22223149 ~ 22229421 (-)
G52226 NA other upstream 1361858 22529606 ~ 22530708 (-)

Expression


Co-expression Network