G51885


Basic Information

Item Value
gene id G51885
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 21717042 ~ 21719133 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU69295
gttccaactagcctactgctccgaataagtgataaaataacgccaacgtgttcctatttacatgttgtgatttgtatagtcacagggtgtacaaataaggTCATGAgtcagccgtcttctaaccgtatacaaactggaagctatattctcagaaaggcgaagcactgctactacgatttgcttgcagcacctgaagccctgtggtgaggagcagagcaTTCGCCTGGAGTttgctcagagttggagtaagAGTCAACAATTTCTAGATAGTATAAGCATAGtcaccttgttatttgtacaccctctgactatacaaatcacaacatgtaaataggaacatgttggcgtcgttttgtcacttattcggagcagtaggctagttggaaccggttacctccaggatctgtgctaggcttagctagcggTGGGAGTGTCAGACAGTTACaacacgcatggagatgagaagggtatgtatcaacttgtcaaactctgggggttacggtgaataagctaaagtcccaataagtcagcgtgttcctttaaggtagGTTAGTAAGGAAGTTGGAAGTTGACATGCTTTATTTACCAGGGATCATCATCTGGCTCCCAGCCCTCAAGCTCGATCAGACAgaagaaacagctagcaacatCAGGCTCATTCTCACTGGGGCAGTGGACAAACCCAGCCGTGGCCATCTTTCAGGTGTGCAGTTACATTCCTCTCTAAATGGCCAGTCTGAAAAGCTTTGCTCGCGTAAATCATGACTGTACATTTTGTCATATGAGTAAAACCTGGTTGCCAATACATCCATGCTGACCATATCTTAAGCAAAAACAGGcttaacttaattttatacacgGTGTGGTTGTCGATGTGAACATGTGCTtccacaggtgttttcagttcgACTGATTAAACTCTGCGCAGGTTTAAGGTGGGCGGGGCTCTGATGGCTACGTAAGGTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69295 True 968 lncRNA 0.45 2 21717042 21719133

Neighbor

gene id symbol gene type direction distance location
znf385a znf385a,LOC103368464,LOC102205706,LOC101482250,LOC102294796,LOC108244609 coding downstream 1640 21650403 ~ 21715402 (-)
LOC120559010 NA coding downstream 76093 21640338 ~ 21640949 (-)
tac3a tac3,LOC103368465 coding downstream 93580 21620971 ~ 21623462 (-)
b4galnt1a LOC104956934 coding downstream 110745 21580204 ~ 21606297 (-)
sp5l LOC102777623,LOC102204397,LOC102293226,LOC100709614,LOC104932563,LOC103356902,LOC104956872 coding downstream 239934 21474380 ~ 21477108 (-)
neurod4 LOC103368461,LOC104956862,LOC101062304 coding upstream 6957 21726090 ~ 21728978 (-)
c1ql4a LOC104932633,LOC102775687,LOC104956857,LOC103385087,LOC103368460 coding upstream 29952 21749085 ~ 21759441 (-)
smc1a smc1a coding upstream 89163 21808296 ~ 21823419 (-)
l1cama l1cam coding upstream 109796 21828929 ~ 21878880 (-)
huwe1 NA coding upstream 179024 21898157 ~ 21957314 (-)
G51871 NA non-coding downstream 91163 21619719 ~ 21625879 (-)
G51864 NA non-coding downstream 138791 21577361 ~ 21578251 (-)
G51857 NA non-coding downstream 150142 21566659 ~ 21566900 (-)
G51848 NA non-coding downstream 168304 21548513 ~ 21548738 (-)
LOC120559690 NA non-coding downstream 184078 21532400 ~ 21532964 (-)
G51886 NA non-coding upstream 59 21719192 ~ 21720123 (-)
G51964 tmem9 non-coding upstream 59999 21779132 ~ 21781064 (-)
LOC120559723 NA non-coding upstream 177195 21896328 ~ 21897591 (-)
G51978 NA non-coding upstream 238328 21957461 ~ 21957711 (-)
G52009 NA non-coding upstream 327635 22046768 ~ 22047729 (-)
esyt1a LOC104932417,LOC104956886,LOC103356920 other downstream 500323 21199340 ~ 21216719 (-)
fmnl3 fmnl3 other downstream 517999 21167904 ~ 21199043 (-)
LOC120558386 hoxc10,LOC100690382 other downstream 764524 20820171 ~ 20952518 (-)
LOC120558911 LOC103362803,LOC100693258 other downstream 1901724 19799205 ~ 19815318 (-)
kcnd3 kcnd3,LOC102776651,LOC102303593,LOC100697611,LOC101470631 other downstream 2639261 18945968 ~ 19077781 (-)
si:dkey-151g10.3 wnk3 other upstream 250919 21970052 ~ 22015043 (-)
LOC120559880 LOC104932903,LOC103358260,LOC104967532,LOC107390844 other upstream 504016 22223149 ~ 22229421 (-)
G52226 NA other upstream 810473 22529606 ~ 22530708 (-)
si:ch211-150o23.3 LOC103367744,LOC101075068 other upstream 1494965 23214098 ~ 23218900 (-)
G52501 eno1,LOC104965722,LOC103151087 other upstream 1589367 23308500 ~ 23319684 (-)

Expression


Co-expression Network