G51978


Basic Information

Item Value
gene id G51978
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 21957461 ~ 21957711 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU69412
GTACAATTGAATGTTCATAAACCTAAAAAACGAAGCCTTTAAAATACTTTTGAATGGTTAGTGGTGACTACAGTTGCCCacggtgtttttttgttgtacaAATTATTGTACAATCATTTTCTCATCTAAACATTTCCATTGCtcaatttaaaatacaatgttcCCCGTCCAAATAGGGGTTAAATGCATTTGTTATAAAATTGTCCATTCTTTATTCCCACAGGGAGtttgaatacattttcatattaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69412 True 251 lncRNA 0.31 1 21957461 21957711

Neighbor

gene id symbol gene type direction distance location
huwe1 NA coding downstream 147 21898157 ~ 21957314 (-)
l1cama l1cam coding downstream 78581 21828929 ~ 21878880 (-)
smc1a smc1a coding downstream 134042 21808296 ~ 21823419 (-)
c1ql4a LOC104932633,LOC102775687,LOC104956857,LOC103385087,LOC103368460 coding downstream 198020 21749085 ~ 21759441 (-)
neurod4 LOC103368461,LOC104956862,LOC101062304 coding downstream 228483 21726090 ~ 21728978 (-)
phf8 phf8,LOC102799568 coding upstream 241 21957952 ~ 21969199 (-)
fam3a fam3a,LOC102798212 coding upstream 58623 22016334 ~ 22022646 (-)
ssr4 ssr4 coding upstream 107364 22065075 ~ 22076836 (-)
LOC120558639 NA coding upstream 123808 22081519 ~ 22090163 (-)
LOC120558638 LOC104967523 coding upstream 134795 22092506 ~ 22103785 (-)
LOC120559723 NA non-coding downstream 59870 21896328 ~ 21897591 (-)
G51964 tmem9 non-coding downstream 176397 21779132 ~ 21781064 (-)
G51886 NA non-coding downstream 237338 21719192 ~ 21720123 (-)
G51885 NA non-coding downstream 238328 21717042 ~ 21719133 (-)
G51871 NA non-coding downstream 331582 21619719 ~ 21625879 (-)
G52009 NA non-coding upstream 89057 22046768 ~ 22047729 (-)
G52010 avpr2,LOC107591070,LOC107673055 non-coding upstream 96003 22053714 ~ 22055099 (-)
G52013 NA non-coding upstream 103001 22060712 ~ 22060924 (-)
LOC120559667 NA non-coding upstream 122188 22079899 ~ 22080456 (-)
G52126 NA non-coding upstream 284812 22242523 ~ 22243328 (-)
esyt1a LOC104932417,LOC104956886,LOC103356920 other downstream 740742 21199340 ~ 21216719 (-)
fmnl3 fmnl3 other downstream 758418 21167904 ~ 21199043 (-)
LOC120558386 hoxc10,LOC100690382 other downstream 1004943 20820171 ~ 20952518 (-)
LOC120558911 LOC103362803,LOC100693258 other downstream 2142143 19799205 ~ 19815318 (-)
kcnd3 kcnd3,LOC102776651,LOC102303593,LOC100697611,LOC101470631 other downstream 2879680 18945968 ~ 19077781 (-)
si:dkey-151g10.3 wnk3 other upstream 12341 21970052 ~ 22015043 (-)
LOC120559880 LOC104932903,LOC103358260,LOC104967532,LOC107390844 other upstream 265438 22223149 ~ 22229421 (-)
G52226 NA other upstream 571895 22529606 ~ 22530708 (-)
si:ch211-150o23.3 LOC103367744,LOC101075068 other upstream 1256387 23214098 ~ 23218900 (-)
G52501 eno1,LOC104965722,LOC103151087 other upstream 1350789 23308500 ~ 23319684 (-)

Expression


Co-expression Network