G52126


Basic Information

Item Value
gene id G52126
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 22242523 ~ 22243328 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU69595
CACTGTTTTACCTGGTAAATTTCACTTGATTACATTTCTCCAAACAAAACACATATTTCTGTATTAAAGGATATAAAGCATATAAAAAAAGCACTATATGTACTAAAAAAAATACCTCTTCTTCTGCACCATCTAAATCAGGTATATCATCCCCTCCCATTGTGTTCATCATCTCTGAGAATTTATCAAAACTTGACAAGTCCTCTTCTGAGTCATCCTCCCAGTCTTTCCAATTATTGAAGTCCACACTCAGCCAGTTGCACTAACAGAAGATAGTTTTAGCTATATTTAACATGTaatccagactgatctcaataagtggcgtatgtatgacacgccaattcgtatgtcATTTTGgctttttagtgtgtttatcaacgccgtttggcctccatttaCTTACATTGCGATTGCGTGTCAATTTACggcgtagcgagtagtatgaaagcccgaaaatccgcatagggaggttggttggggtggttgatgggtcaaacaacacaggactttcacccaggagactggggttcgtgtcccgcgtgtcacgtttcctaaacccaaccgccccgttcttcttttcctaaacccaaccccctTATTGtgttcctaaacccaaccgtccgaaaagcaattatgcgtcttgataacatgccaaaatggcatacgaattggtgtgtcatacatacaccacttattgagatcagtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69595 True 706 lncRNA 0.41 2 22242523 22243328

Neighbor

gene id symbol gene type direction distance location
dtx3 LOC103368342,LOC104967533 coding downstream 5315 22231147 ~ 22237208 (-)
LOC120559233 LOC104967529,LOC103363729,LOC103384589 coding downstream 69515 22135324 ~ 22173008 (-)
galnt6 LOC100705948,LOC102305018,LOC103363730 coding downstream 107880 22125413 ~ 22134643 (-)
LOC120558646 LOC104967526,LOC103363731 coding downstream 117549 22120600 ~ 22124974 (-)
naa10 naa10,LOC106572706 coding downstream 133463 22105623 ~ 22109060 (-)
stat6 LOC104967536 coding upstream 7926 22251254 ~ 22274480 (-)
fignl2 fignl2,LOC104932960,LOC104962574 coding upstream 36074 22279402 ~ 22295441 (-)
scn8aa LOC103368290,LOC104932970 coding upstream 98097 22341425 ~ 22388204 (-)
dip2ba LOC103368268,LOC103384622 coding upstream 154542 22397870 ~ 22441829 (-)
atf7a atf7,LOC107095163 coding upstream 200174 22443502 ~ 22461484 (-)
LOC120559667 NA non-coding downstream 162067 22079899 ~ 22080456 (-)
G52013 NA non-coding downstream 181599 22060712 ~ 22060924 (-)
G52010 avpr2,LOC107591070,LOC107673055 non-coding downstream 187424 22053714 ~ 22055099 (-)
G52009 NA non-coding downstream 194794 22046768 ~ 22047729 (-)
G51978 NA non-coding downstream 284812 21957461 ~ 21957711 (-)
G52124 NA non-coding upstream 483 22243811 ~ 22266053 (-)
G52127 LOC106567007,LOC105928945,LOC103368323 non-coding upstream 3782 22247110 ~ 22248083 (-)
G52128 LOC101065051,LOC100704616 non-coding upstream 4809 22248137 ~ 22248720 (-)
G52135 NA non-coding upstream 59837 22303165 ~ 22303794 (-)
G52137 NA non-coding upstream 84327 22327655 ~ 22327878 (-)
LOC120559880 LOC104932903,LOC103358260,LOC104967532,LOC107390844 other downstream 13102 22223149 ~ 22229421 (-)
si:dkey-151g10.3 wnk3 other downstream 227480 21970052 ~ 22015043 (-)
esyt1a LOC104932417,LOC104956886,LOC103356920 other downstream 1025804 21199340 ~ 21216719 (-)
fmnl3 fmnl3 other downstream 1043480 21167904 ~ 21199043 (-)
LOC120558386 hoxc10,LOC100690382 other downstream 1290005 20820171 ~ 20952518 (-)
G52226 NA other upstream 286278 22529606 ~ 22530708 (-)
si:ch211-150o23.3 LOC103367744,LOC101075068 other upstream 970770 23214098 ~ 23218900 (-)
G52501 eno1,LOC104965722,LOC103151087 other upstream 1065172 23308500 ~ 23319684 (-)
masp2 masp2,LOC106536928,LOC103357864,LOC107086886 other upstream 2091821 24335149 ~ 24339456 (-)
phactr3a LOC100701276,LOC107550338,LOC107551495,LOC104947949,LOC103365918,LOC106955159 other upstream 2507103 24750431 ~ 24785005 (-)

Expression


Co-expression Network