G52818


Basic Information

Item Value
gene id G52818
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 24705517 ~ 24706004 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU70571
GTTCTTTCACAGACAAGCTTAAAAGGGAGCAAACTCCTTCATTCACACTGAATGAAACAGCTACTCACCTCTCATTAGATCTGTATCCTGTTCGTGACGGCAATTGATATCTGGGAAATATCTGGAAATGAGATGGAGACTGAACAAATGCTGAGTACAATGAATTCAGactaatgcagctttattcacacaacaaacaaacatactttcATGAAAGAGAGAACAGTTGACATGCACCAAATGTATATGCCAAGGTTTCTCCTAGAAAGGAAGATAATCATGTGTACACCCTCCTAAGAGCATGTACCCATAGTGTCTCTACGAACATCAGAATAACTCCTCCTTTATACTTTTTGTCCTCACACGCTTCAAGCTATCTATTTCAATGcaacagtttactcttaaactacaccttttatggcacgtgctcctaatagattcccacattcctggctccaattcctctgcgtgaaagttgtacccaaact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU70571 True 488 lncRNA 0.40 1 24705517 24706004

Neighbor

gene id symbol gene type direction distance location
edn3b NA coding downstream 7535 24688599 ~ 24697982 (-)
si:dkey-178k16.1 epb41l1,LOC103363988,LOC102294250,LOC102199659 coding downstream 33719 24634771 ~ 24671798 (-)
cntn3a.2 LOC103363983,LOC100703160,LOC104954126,LOC102301181,LOC102197109 coding downstream 278449 24390197 ~ 24427068 (-)
exosc10 exosc10,LOC102796841 coding downstream 320909 24370418 ~ 24384608 (-)
srm srm coding downstream 340006 24360952 ~ 24365511 (-)
fam217ba fam217b,LOC102078452 coding upstream 9718 24715722 ~ 24719674 (-)
wfdc2 LOC104919425,LOC106572146 coding upstream 88865 24794869 ~ 24796108 (-)
LOC120559637 LOC103353002 coding upstream 241757 24947761 ~ 24958164 (-)
LOC120559745 LOC103353003,LOC104920211,LOC100699381,LOC101479901 coding upstream 263940 24969944 ~ 24990360 (-)
ttc34 ttc34 coding upstream 293874 24999878 ~ 25006135 (-)
G52776 chl1,LOC101079354 non-coding downstream 237498 24466034 ~ 24468019 (-)
G52765 NA non-coding downstream 318896 24385903 ~ 24386621 (-)
G52746 NA non-coding downstream 338048 24367149 ~ 24367469 (-)
G52732 NA non-coding downstream 378541 24325020 ~ 24326976 (-)
G52706 NA non-coding downstream 596803 24108484 ~ 24108714 (-)
G52883 NA non-coding upstream 214712 24920716 ~ 24945315 (-)
LOC120559116 LOC103353002,LOC102301713,LOC102203634,LOC101480204,LOC104956590 non-coding upstream 219753 24925757 ~ 24928651 (-)
G52893 NA non-coding upstream 253787 24959791 ~ 24960183 (-)
G52935 alas2,LOC108236847,LOC106524166 non-coding upstream 284979 24990983 ~ 24996820 (-)
G52936 alas2,LOC106524166 non-coding upstream 292114 24998118 ~ 24999647 (-)
masp2 masp2,LOC106536928,LOC103357864,LOC107086886 other downstream 366061 24335149 ~ 24339456 (-)
G52501 eno1,LOC104965722,LOC103151087 other downstream 1385833 23308500 ~ 23319684 (-)
si:ch211-150o23.3 LOC103367744,LOC101075068 other downstream 1486617 23214098 ~ 23218900 (-)
G52226 NA other downstream 2174809 22529606 ~ 22530708 (-)
LOC120559880 LOC104932903,LOC103358260,LOC104967532,LOC107390844 other downstream 2476096 22223149 ~ 22229421 (-)
phactr3a LOC100701276,LOC107550338,LOC107551495,LOC104947949,LOC103365918,LOC106955159 other upstream 44427 24750431 ~ 24785005 (-)
acot7 acot7,LOC102782704 other upstream 1204751 25910755 ~ 25972322 (-)
emc1 NA other upstream 1430994 26136998 ~ 26147245 (-)
G53196 NA other upstream 1506989 26212993 ~ 26214882 (-)
LOC120559114 LOC101164642,LOC104966947,LOC100690915,LOC104926428,LOC102195969,LOC101062277 other upstream 1686008 26392012 ~ 26402310 (-)

Expression


Co-expression Network