G54000


Basic Information

Item Value
gene id G54000
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 29375019 ~ 29375422 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU72159
aaaacacacacacacacacacacacacacacacacacacgtcgctCATTAGTGTTTCTACTCACCGCTTGAAGTGCTCAATGATTTTCTCTTCTCGCACATTTTCGGGTAAATTTCCCACCCATAAATGTCTGGTTTCCCGGACCATACTGTGTGCTCCTGCTCCCGTATCATACAGATGAGTTTGCTATGTCAGTTTCTTCCCGTGCAAAATAGAAAAGGTTTGCAAAATAAACCccggacaaaaaaaagaaaaaaaaaaaaaaacacttggcGCAAATCATTGACTGGTCGTTGTGACCCAATATAAACCATTAGGTTGGATCCCCGCACGCTGTTTGATACTCTTCACTGTTAAAGCGCGATCTTGAACCTCATGAACGCGCTCCGGACTGTTCCCGTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72159 True 404 lncRNA 0.44 1 29375019 29375422

Neighbor

gene id symbol gene type direction distance location
LOC120559893 LOC104921444,LOC103367276,LOC104966657,LOC106952640,LOC103151253,LOC106934176 coding downstream 37421 29323865 ~ 29337598 (-)
gabrd gabrd,LOC102778860 coding downstream 194328 29158029 ~ 29180691 (-)
LOC120559029 LOC102787320,LOC102195592,LOC100705795,LOC102314501 coding downstream 220794 29150403 ~ 29154225 (-)
dffb dffb coding downstream 857057 28510901 ~ 28517962 (-)
b3gnt7l LOC103356136,LOC104946517,LOC101486029 coding downstream 872114 28500573 ~ 28502905 (-)
LOC120559132 LOC102197101,LOC101463906,LOC102310392,LOC100702039 coding upstream 217626 29593048 ~ 29609420 (-)
ttll10 NA coding upstream 234487 29609909 ~ 29650365 (-)
mib2 mib2 coding upstream 307367 29682789 ~ 29731910 (-)
ubiad1 ubiad1 coding upstream 359519 29734941 ~ 29739193 (-)
atp13a2 NA coding upstream 407984 29783406 ~ 29804982 (-)
LOC120558378 NA non-coding downstream 1771 29363028 ~ 29373248 (-)
G53997 NA non-coding downstream 2195 29371347 ~ 29372824 (-)
G53994 NA non-coding downstream 25809 29348358 ~ 29349210 (-)
G53972 gnb1,gnb1b,LOC107385217,LOC103044197,LOC106516123,LOC107666091 non-coding downstream 80858 29250963 ~ 29294161 (-)
LOC120559849 NA non-coding downstream 307120 29050512 ~ 29067899 (-)
G54001 spen,LOC102775881 non-coding upstream 2526 29377948 ~ 29380326 (-)
G54005 spen non-coding upstream 9701 29385123 ~ 29385852 (-)
G54006 NA non-coding upstream 13129 29388551 ~ 29389563 (-)
G54038 ddost,LOC107687429 non-coding upstream 146368 29521790 ~ 29523462 (-)
LOC120559594 NA non-coding upstream 300949 29676371 ~ 29678804 (-)
LOC120559896 slc25a45 other downstream 19135 29350078 ~ 29355884 (-)
ajap1 ajap1 other downstream 345698 28971286 ~ 29029321 (-)
LOC120559779 LOC104918355,LOC103374204,LOC103385013 other downstream 1188492 28153182 ~ 28186527 (-)
LOC120558759 NA other downstream 1444504 27845264 ~ 27930515 (-)
xpc xpc other downstream 1714373 27644783 ~ 27660646 (-)
clcnk clcnka,LOC104952128,LOC102786725 other upstream 99081 29474503 ~ 29492975 (-)
cdk11b LOC103366252,LOC101466870,LOC100697195 other upstream 377239 29752661 ~ 29765873 (-)
tafa5l LOC102786421,LOC104919510,LOC100700110,LOC103384901,LOC106518908,LOC107086703 other upstream 595774 29971196 ~ 30072699 (-)
LOC120558955 LOC104919264,LOC102777709,LOC100695043,LOC102209489,LOC103373809,LOC103152775,LOC101470785,LOC106963186 other upstream 2917520 32292942 ~ 32323275 (-)
LOC120559593 plxnb1,LOC103373813,LOC107100289 other upstream 3215561 32590983 ~ 32666459 (-)

Expression


Co-expression Network