G56009


Basic Information

Item Value
gene id G56009
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 38677325 ~ 38677715 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU74888
GAGCGCGCCTCGCGGTGCTGATGGAGCGGAGCGCCATTCAGCCTAAACACaggcactgctgctgctgtatcgatgaggaagaggaggaggagaaggaggatgatgatgatgatgatgatgatgaagaagaagagcgGGGATCTTTCATCTGATCACACCATCGATCCGCGATGATCGATCGGCGCCTGCAGCCGCGCTGATCGGCCCGTTTGATCCCGCTGCATGCACGAGGCGACATCAATCCATCCATCGATCGCACACCTGATGTGAGGACACGGCGCGCGAGCCGCAGCGGGAGACAATCAGCTGACCGGAGGATTCTACGGGACTGTTGATGAGGTCCATGTGACCCACGAGCTGCAGATCGATCCCCGCCGGAAATGAGGacgtg

Function

GO: NA

KEGG:

id description
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU74888 True 391 lncRNA 0.59 1 38677325 38677715

Neighbor

gene id symbol gene type direction distance location
hcfc1b NA coding upstream 4681 38628960 ~ 38672644 (+)
LOC120559889 LOC101079871,LOC107557552,LOC101066234,LOC106676044 coding upstream 53386 38614203 ~ 38623939 (+)
lhfpl4b LOC107099607,LOC103460219,LOC106530513 coding upstream 179866 38488509 ~ 38497459 (+)
hdac6 NA coding upstream 203408 38441402 ~ 38473917 (+)
rtca rtca,LOC102794842 coding upstream 299671 38362482 ~ 38377654 (+)
LOC120559063 LOC106516718,LOC103372410 coding downstream 109606 38787321 ~ 38804328 (+)
otud5a otud5 coding downstream 454705 39132420 ~ 39186033 (+)
pim2 pim2,LOC107397278 coding downstream 512368 39190083 ~ 39200407 (+)
slc35a2 NA coding downstream 530015 39207730 ~ 39246036 (+)
bcap31 bcap31,LOC102784580 coding downstream 604294 39282009 ~ 39313729 (+)
G56008 NA non-coding upstream 18053 38644859 ~ 38659272 (+)
G56007 NA non-coding upstream 36219 38640675 ~ 38641106 (+)
G55953 NA non-coding upstream 99494 38498753 ~ 38577831 (+)
G56020 NA non-coding downstream 1690 38679405 ~ 38680617 (+)
G56016 NA non-coding downstream 13101 38690816 ~ 38691562 (+)
G56017 NA non-coding downstream 13515 38691230 ~ 38693570 (+)
G56018 NA non-coding downstream 14373 38692088 ~ 38693904 (+)
G56015 NA non-coding downstream 125122 38802837 ~ 38901910 (+)
irak1 NA other upstream 73597 38571156 ~ 38603728 (+)
cxxc1a LOC106910851,LOC103130742,LOC106940064,LOC107099357,LOC101080107,LOC106536805 other upstream 237912 38412062 ~ 38439413 (+)
G55956 NA other upstream 240102 38436080 ~ 38437223 (+)
LOC120558454 LOC104955491 other upstream 284747 38380594 ~ 38392578 (+)
G55919 NA other upstream 440470 38111171 ~ 38236855 (+)
LOC120559555 NA other downstream 15410 38693125 ~ 38815201 (+)
LOC120559064 magix,LOC103365596,LOC102076977,LOC102203881 other downstream 127697 38805412 ~ 38937843 (+)
G56032 NA other downstream 182058 38859773 ~ 38895663 (+)
G56033 NA other downstream 197112 38874827 ~ 38899283 (+)
G56035 NA other downstream 201301 38879016 ~ 38880382 (+)

Expression


Co-expression Network