G56016


Basic Information

Item Value
gene id G56016
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 38690816 ~ 38691562 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU74924
cccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagacacagacacacacacacacagacacagagacacacacagagacacacacacacacacacacacacacagagacacacacagagacacacacacagacacagagacacacacagagacacacacacacacacacacacacacagagacacagacacagagacacacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74924 True 244 lncRNA 0.50 2 38690816 38691562

Neighbor

gene id symbol gene type direction distance location
hcfc1b NA coding upstream 18172 38628960 ~ 38672644 (+)
LOC120559889 LOC101079871,LOC107557552,LOC101066234,LOC106676044 coding upstream 66877 38614203 ~ 38623939 (+)
lhfpl4b LOC107099607,LOC103460219,LOC106530513 coding upstream 193357 38488509 ~ 38497459 (+)
hdac6 NA coding upstream 216899 38441402 ~ 38473917 (+)
rtca rtca,LOC102794842 coding upstream 313162 38362482 ~ 38377654 (+)
LOC120559063 LOC106516718,LOC103372410 coding downstream 95759 38787321 ~ 38804328 (+)
otud5a otud5 coding downstream 440858 39132420 ~ 39186033 (+)
pim2 pim2,LOC107397278 coding downstream 498521 39190083 ~ 39200407 (+)
slc35a2 NA coding downstream 516168 39207730 ~ 39246036 (+)
bcap31 bcap31,LOC102784580 coding downstream 590447 39282009 ~ 39313729 (+)
G56020 NA non-coding upstream 10199 38679405 ~ 38680617 (+)
G56009 NA non-coding upstream 13101 38677325 ~ 38677715 (+)
G56008 NA non-coding upstream 31544 38644859 ~ 38659272 (+)
G56007 NA non-coding upstream 49710 38640675 ~ 38641106 (+)
G55996 LOC103367257,LOC102314167,LOC107391471,LOC102203308 non-coding upstream 147309 38538763 ~ 38543507 (+)
G56018 NA non-coding downstream 526 38692088 ~ 38693904 (+)
G56015 NA non-coding downstream 111275 38802837 ~ 38901910 (+)
G56014 NA non-coding downstream 125074 38816636 ~ 38817548 (+)
G56019 NA non-coding downstream 125644 38817206 ~ 38856871 (+)
G56029 NA non-coding downstream 129697 38821259 ~ 38821970 (+)
irak1 NA other upstream 87088 38571156 ~ 38603728 (+)
cxxc1a LOC106910851,LOC103130742,LOC106940064,LOC107099357,LOC101080107,LOC106536805 other upstream 251403 38412062 ~ 38439413 (+)
G55956 NA other upstream 253593 38436080 ~ 38437223 (+)
LOC120558454 LOC104955491 other upstream 298238 38380594 ~ 38392578 (+)
G55919 NA other upstream 453961 38111171 ~ 38236855 (+)
LOC120559555 NA other downstream 1563 38693125 ~ 38815201 (+)
LOC120559064 magix,LOC103365596,LOC102076977,LOC102203881 other downstream 113850 38805412 ~ 38937843 (+)
G56032 NA other downstream 168211 38859773 ~ 38895663 (+)
G56033 NA other downstream 183265 38874827 ~ 38899283 (+)
G56035 NA other downstream 187454 38879016 ~ 38880382 (+)

Expression


Co-expression Network