G56030


Basic Information

Item Value
gene id G56030
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 38826593 ~ 38828139 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU74940
ctcacttttactcacaacatgctaaccggcaacataggattccattcactacgctaagctaactagcggtgctgccggtgttgcaccggactaaaacgatgcatgcacaaaaactgcgttggcccacctatctacagctagaggagaccccacctatctacaactaggggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctaggggagaccccacctatctacagctaggggagaccccacctatctacagctagaggagaccccacctatctacagctagaggataccccacctatctacagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctaggggagacctcacctatctacagctagaggagacctcacctatctacagctaggggagacctcacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctagagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74940 True 768 lncRNA 0.52 4 38826593 38828139

Neighbor

gene id symbol gene type direction distance location
LOC120559063 LOC106516718,LOC103372410 coding upstream 22265 38787321 ~ 38804328 (+)
hcfc1b NA coding upstream 153949 38628960 ~ 38672644 (+)
LOC120559889 LOC101079871,LOC107557552,LOC101066234,LOC106676044 coding upstream 202654 38614203 ~ 38623939 (+)
lhfpl4b LOC107099607,LOC103460219,LOC106530513 coding upstream 329134 38488509 ~ 38497459 (+)
hdac6 NA coding upstream 352676 38441402 ~ 38473917 (+)
otud5a otud5 coding downstream 304281 39132420 ~ 39186033 (+)
pim2 pim2,LOC107397278 coding downstream 361944 39190083 ~ 39200407 (+)
slc35a2 NA coding downstream 379591 39207730 ~ 39246036 (+)
bcap31 bcap31,LOC102784580 coding downstream 453870 39282009 ~ 39313729 (+)
kcnd1 kcnd1 coding downstream 589193 39417332 ~ 40418704 (+)
G56029 NA non-coding upstream 4623 38821259 ~ 38821970 (+)
G56014 NA non-coding upstream 9045 38816636 ~ 38817548 (+)
G56018 NA non-coding upstream 132689 38692088 ~ 38693904 (+)
G56017 NA non-coding upstream 133023 38691230 ~ 38693570 (+)
G56016 NA non-coding upstream 135031 38690816 ~ 38691562 (+)
G56036 NA non-coding downstream 80716 38908855 ~ 38909200 (+)
G56037 NA non-coding downstream 81796 38909935 ~ 38910294 (+)
G56038 NA non-coding downstream 82173 38910312 ~ 38957054 (+)
G56058 NA non-coding downstream 219565 39047704 ~ 39048855 (+)
G56059 NA non-coding downstream 221728 39049867 ~ 39110796 (+)
LOC120559555 NA other upstream 11392 38693125 ~ 38815201 (+)
irak1 NA other upstream 222865 38571156 ~ 38603728 (+)
cxxc1a LOC106910851,LOC103130742,LOC106940064,LOC107099357,LOC101080107,LOC106536805 other upstream 387180 38412062 ~ 38439413 (+)
G55956 NA other upstream 389370 38436080 ~ 38437223 (+)
LOC120558454 LOC104955491 other upstream 434015 38380594 ~ 38392578 (+)
G56032 NA other downstream 31634 38859773 ~ 38895663 (+)
G56033 NA other downstream 46688 38874827 ~ 38899283 (+)
G56035 NA other downstream 50877 38879016 ~ 38880382 (+)
LOC120559065 LOC107695300,LOC103365588,LOC101480057,LOC102306209,LOC102203592,LOC103460216,LOC101079199 other downstream 144271 38972410 ~ 39083496 (+)
si:ch211-180f4.1 LOC103365591,LOC102308931 other downstream 268992 39097131 ~ 39156172 (+)

Expression


Co-expression Network