Gene
RNA
| Item | Value |
|---|---|
| gene id | G56138 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053116.1 |
| NCBI id | CM020913.1 |
| chromosome length | 44101041 |
| location | 39746452 ~ 39764933 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU75169 | True | 573 | lncRNA | 0.50 | 2 | 39764305 | 39764933 |
| TU75170 | False | 354 | lncRNA | 0.49 | 3 | 39746452 | 39764933 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| bcap31 | bcap31,LOC102784580 | coding | upstream | 432723 | 39282009 ~ 39313729 (+) |
| slc35a2 | NA | coding | upstream | 500416 | 39207730 ~ 39246036 (+) |
| pim2 | pim2,LOC107397278 | coding | upstream | 546045 | 39190083 ~ 39200407 (+) |
| otud5a | otud5 | coding | upstream | 560419 | 39132420 ~ 39186033 (+) |
| LOC120559063 | LOC106516718,LOC103372410 | coding | upstream | 942124 | 38787321 ~ 38804328 (+) |
| LOC120558738 | LOC101484296,LOC106675709 | coding | downstream | 43930 | 39808863 ~ 39811404 (+) |
| LOC120558740 | NA | coding | downstream | 131032 | 39895965 ~ 39897486 (+) |
| LOC120558439 | LOC102207434,LOC101484296,LOC102207724,LOC106675709 | coding | downstream | 140757 | 39905690 ~ 39918513 (+) |
| ptpn18 | NA | coding | downstream | 395074 | 40160007 ~ 40186156 (+) |
| hm13 | hm13,LOC102793025 | coding | downstream | 665182 | 40430115 ~ 40451414 (+) |
| LOC120558745 | NA | non-coding | upstream | 2282 | 39656666 ~ 39744170 (+) |
| G56133 | NA | non-coding | upstream | 3888 | 39690778 ~ 39742564 (+) |
| LOC120558746 | NA | non-coding | upstream | 82273 | 39658758 ~ 39664179 (+) |
| G56098 | NA | non-coding | upstream | 132218 | 39559928 ~ 39614234 (+) |
| G56808 | NA | non-coding | downstream | 261376 | 40026309 ~ 40026733 (+) |
| G56811 | NA | non-coding | downstream | 268688 | 40033621 ~ 40038323 (+) |
| G56810 | gripap1 | non-coding | downstream | 273714 | 40038647 ~ 40044842 (+) |
| G56812 | NA | non-coding | downstream | 278991 | 40043924 ~ 40044615 (+) |
| G56827 | NA | non-coding | downstream | 365507 | 40130440 ~ 40285378 (+) |
| G56112 | NA | other | upstream | 182184 | 39523146 ~ 39564268 (+) |
| G56072 | NA | other | upstream | 476024 | 39182501 ~ 39270428 (+) |
| si:ch211-180f4.1 | LOC103365591,LOC102308931 | other | upstream | 590280 | 39097131 ~ 39156172 (+) |
| LOC120559065 | LOC107695300,LOC103365588,LOC101480057,LOC102306209,LOC102203592,LOC103460216,LOC101079199 | other | upstream | 662956 | 38972410 ~ 39083496 (+) |
| G56035 | NA | other | upstream | 866070 | 38879016 ~ 38880382 (+) |
| G56807 | NA | other | downstream | 252052 | 40016985 ~ 40017315 (+) |
| G56818 | NA | other | downstream | 337452 | 40102385 ~ 40148620 (+) |
| G56819 | NA | other | downstream | 345525 | 40110458 ~ 40111288 (+) |
| G56847 | NA | other | downstream | 621395 | 40386328 ~ 40488120 (+) |
| LOC120559073 | NA | other | downstream | 1334974 | 41099907 ~ 41103714 (+) |
