G56964


Basic Information

Item Value
gene id G56964
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 41030599 ~ 41076095 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU76456
aaaaaaaacggcactggaggctttcctcggaggaaaagatgtttgatctgattggttgatttggcccgtctatcaccaactataggtggtgatagtcagatggtttatccaatcagctaaccaggattttcacccccttcccaaaagttcgccaacggtaagttcccagatggatatgccgagcagaTGCAAATCAATCCATCTGGCGAAGTCAGGTTACTAACtttagaaaaagtgattttttttcataatatgggcactttaactaaaagctctatctctgtagggatccatcccataatgttgtcagacactctGGAGCCGTACAGGTTTACAGGTTGTGTTTCCGTGGAGAATGTGCAGCTTTGTGAATGTTTCTGAGAGGGATAAAGAGAGGGATGAAGAGAGGGATGAAGAGAGGGATGAAgagagggatgaagagagaTCTGAACCGGACCCCGGCGCTCTCTCTGTACAGAAGGTTAAACTGTTAGACCAGCGCTTCTCAAACGGTTCTCTCAAAGGTCCACATCTGGTTTCTATTCCAGCTCAGAACTCTGACACAAAACAACATGACACCAGTCCTCCTTTTCTTAATAAATACTATGGAATATgctctatatgatatttatgcaattttatgcaatgaaattgtgggaacttgcaaaacctgcggtttgatgaaacagaaaaaaaaagtctcccccaccaacaccctgcttttcgatgatgttcacgtcgcgtaattacatcacttcataacgttcccatggcaacaggggagaatggctgctcttgtgtgaagtaaacgcaacatttttctactttctgttgagatatattacgggactttttttgcaacgaaaatgcgggggaTTATGACATCATGCAAGACCCGCATAtagtgtccccccccccccatatatatgcagactttggttgattatgcgttgaattgtgcgatcgcataatcacgtttttctgtaGGGACTGTATTACATTAACTCTTCCCTGTTAACTCTTCACTGTTAACTCTTCCCTGTTAACTCTTCACTGTTAACTCTTCCCTGTTAACTCTTCCCTGTTAACTCTTCCCTGTTAATTCTTCCCTGTTAACTCTTCCCTGTTAACTCTTCAGCAACATTTATTCACGTTGACTTCTCTATTCTGTAAAATGGGATTTGGAACCCAATGTCACCGTTTTCTAGCCGTTTTCTTGGTACTTTTCTTCAGCGTACtcgccgttttttttttttagcattttcgttttttttctttttcaattttttttaaacttctttaGTCGCATTTGTCAGattttttgttgacatttttgcttcttttcaacatatttgtttactttttcagcatttttatctttttttttttcaattttcttttagcATTTTTCAACAAAACAAATTTATTTTTGATGCTTATCTTCTAACAACGTTCCCCCCCCTCCAGGAccgtcctcacccagaaaacagCCCTATAAGTCAACGGTGCTTCCAGCGCTACTTAGTTAAGGCTAGAttaagatggtggtttgggttaCTATTCATTTTAAAGAAGTCAGAAATTCCCGTTACGACTAAAGTGGTAAATTTATAAGAACAAAAGTAAAATATTCTCAGACATTAAAGTCACACATCATACAAGGATTCAGtcattatttttacattattgcAGCCAAGTCTTCACATGGTCACAAAGAAAGAGTTGTAACTCTTCACTGTTAACTCTTCACTGTTAACTCTTCACTGTTAACTCTTCCCTGTTAACTCTTCACTGTTAACTCTTCCCTGTTAACTCTTCACTGTTAACTCTTCACTGTTAACTCTTCACTGTTAACTCTTCACTGTTAACTCTTCACTGTTAACTCTTCCCTGTTAACTCTTCACTGTTAACTCTTCACTGTTAACTCTTCAGCAACATTTATTCATGTTGACTTCTGTACTTTTCTTCAGTGTACTTGCCGTTTTTTTCTGATGGTATTGTcgatttttgacactttttaccacgtttttgacctttttgccattttcagctattTGTCGATgttttcccctctttttttGTACGTTTTAGgagctttaaaaaataagtttttgtctcttttttcaatcgtttttttttacttgtttcaGCATATTTGTTTTTCCAACGTTACTGTTTTCTGATGGTTTTAATCTTTTCCCGCTTCTTTCGACATTTGTGTAACTTTTTCCCGCCAtgtttcatcatgtttttttgtttatttttttctgatgttgttttttgACACCTTTTTCTGCGGTTTAAgacctttttgtcattttaggtGCTTTCTTAAAcaatgttgtcatttttttccgaCTTATTTTAGTCCCTTTTCCCGCTTGTTTTGGTCTCCTTTTGTCCCCCGTGTATATTCAACATCACTACCAATTTAATGATTATTAATAAATCTATTTCAAAAGACAAAAACGTGACACTTGATTAGGTTTTTGGACGGTGATGCGGACCTTTGGTCAGGACTTTGAGAAGCGCTGCTTTAGGaggtttttacagtgtattaaTATTCACTCAGACTCAAACTACTAGAAACACGAGAGAAGAAACGTAGCTGATATTAAAGCTAGATGGATCACTAATTACATCTTCATATGAAGGGAAGTCTTTTTACATGTCACAACTATGTCTATGTCTCTGTAATGTTTGCTGTCACcattcataaaaatataaatgtgtgtcAGAGCCGA
>TU76462
TGGGTgttaatttaaagccctggttAACTCttcactctcctctctccataATTTCTTTCCCAGAACACTTGTGGATCAACGATCATCTTTTCCTTTCCATCTTTTccatcctctcttcctctcccagAGTTCCCTTTTGTATGATACCCCTTTATGGACACAATGTCACCCTcccctgcagcttcctgtctGTGCAGGAAGTGATGTTTAATCCATAGTGAGATTAGAGAAGTTGCTGTACTTGCACAATAAGCTGTTGTAAAAGCCGGAGCCTGTTTCAGGACTCTCCAAACGGACTCATCCCTCCAGCTTCCTGCTGTAATAAGGTGTGACAAGAAAAcaatgaatgaagtgtgttttacgctgctagaagtcctgattatttacatggagtatggtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtatggtggagatatgctggctctatacatgctaaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtggagtttggtgatggtgattttggggctgttttatgttaaactaaaaggatcttactctttaaagcgcccatattatgactattatgatattattttcaggttcataatagtttttaaggttgtaccagaataggtttacatggtttaattatcaaaaaccaccatatttttgttgtactgcacattgctgcagctcctcttttcatcctatgttcaggtctctgttttagctacagagtgagacatctcactgctgttacatctttgttgtcagtcgcacatgttcagtagctaggtaagactacatgctcagtagctaggtaaggactacatactcagtagctaggtaaggactacatactcagtagctaggtaagactacatgttcagtagctaggtaaggactactgctcatagctaggtaaggactacatgctcagtagctaggtaaggactacatactcagtagctaggtaaggactacatgctcagtagctaggtaaggactacatgctcagtagctagctaggtaaggactacatgctcagtagctagctaggtaaggactacatgctcagtagctaggtaaggactacatgctcagtagctagctaggtaaggactacatgctcagtagctaggtaaggactacatgctttctttgtagaaagccgtgcagatgttgaccagctcccccggagactgaaggcaggacacattcagaaaccggatctcactcagaacaccatcgaTGGGTTTTATCAAAGTTTGTACCAGAGACACAAATTACTAGCcttgtgagaccgtcctgatctggtgagctccagttttccactctcagatcagtctggcatcttcagatagagaaaatttggagccgttcgccaaacgaccgaccaatcagcgttggttttgaggcgggtttaggtgtgacgcaatgAGAAGCGTTTGTTCAGTCTAaacagcttccacggatgagatgagcgtagctattgcagcaagttttatctgaattagaaagtattccttcattgaaagaagagcaaaaaaaaaacggcactggaggcttttctcggaggaaaagatttttgatctgattggttgatttggcccgtcagatggtttatccaatcagctaaccaggattttcacccccttcccaaaagttcgccaacggtaagttcccagatggatatgccgagcagaTGCAAATCAATCCATCTGGCGAAGTCAGGTTACTAACtttagaaaaagtgattttttttcataatatgggcactttaactaaaagctctatctctgtagggatccatcccataatgttgtcagacactctGGAGCCGTACAGGTTTACAGGTTGTGTTTCCGTGGAGAATGTGCAGCTTTGTGAATGTTTCTGAGAGGGATAAAGAGAGGGATGAAGAGAGGGATGAAGAGAGGGATGAAgagagggatgaagagagaTCTGAACCGGACCCCGGCGCTCTCTCTGTACAGAAGGTTAAACTGTTAGACCAGCGCTTCTCAAACGGTTCTCTCAAAGGTCCACATCTGGTTTCTATTCCAGCTCAGAACTCTGACACAAAACAACATGACACCAGTCCTCCTTTTCTTAATAAATACTATGGAATATgctctatatgatatttatgcaattttatgcaatgaaattgtgggaacttgcaaaacctgcggtttgatgaaacagaaaaaaaaagtctcccccaccaacaccctgcttttcgatgatgttcacgtcgcgtaattacatcacttcataacgttcccatggcaacaggggagaatggctgctcttgtgtgaagtaaacgcaacatttttctactttctgttgagatatattacgggactttttttgcaacgaaaatgcgggggaTTATGACATCATGCAAGACCCGCATAtagtgtccccccccccccatatatatgcagactttggttgattatgcgttgaattgtgcgatcgcataatcacgtttttctgtaGGGACTGTATTACATTAACTCTTCCCTGTTAACTCTTCCCTGTTAACTCTTCACTGTTAACTCTTCCCTGTTAACTCTTCACTGTTAACTCTTCACTGTTAACTCTTCACTGTTAACTCTTCACTGTTAACTCTTCACTGTTAACTCTTCCCTGTTAACTCTTCACTGTTAACTCTTCACTGTTAACTCTTCAGCAACATTTATTCATGTTGACTTCTGTACTTTTCTTCAGTGTACTTGCCGTTTTTTTCTGATGGTATTGTcgatttttgacactttttaccacgtttttgacctttttgccattttcagctattTGTCGATgttttcccctctttttttGTACGTTTTAGgagctttaaaaaataagtttttgtctcttttttcaatcgtttttttttacttgtttcaGCATATTTGTTTTTCCAACGTTACTGTTTTCTGATGGTTTTAATCTTTTCCCGCTTCTTTCGACATTTGTGTAACTTTTTCCCGCCAtgtttcatcatgtttttttgtttatttttttctgatgttgttttttgACACCTTTTTCTGCGGTTTAAgacctttttgtcattttaggtGCTTTCTTAAAcaatgttgtcatttttttccgaCTTATTTTAGTCCCTTTTCCCGCTTGTTTTGGTCTCCTTTTGTCCCCCGTGTATATTCAACATCACTACCAATTTAATGATTATTAATAAATCTATTTCAAAAGACAAAAACGTGACACTTGATTAGGTTTTTGGACGGTGATGCGGACCTTTGGTCAGGACTTTGAGAAGCGCTGCTTTAGGaggtttttacagtgtattaaTATTCACTCAGACTCAAACTACTAGAAACACGAGAGAAGAAACGTAGCTGATATTAAAGCTAGATGGATCACTAATTACATCTTCATATGAAGGGAAGTCTTTTTACATGTCACAACTATGTCTATGTCTCTGTAATGTTTGCTGTCACcattcataaaaatataaatgtgtgtcAGAGCCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76456 False 2744 lncRNA 0.38 2 41030599 41076095
TU76462 True 3582 lncRNA 0.40 5 41071391 41076095

Neighbor

gene id symbol gene type direction distance location
LOC120558575 cirbp coding upstream 140720 40888410 ~ 40889879 (+)
LOC120558500 NA coding upstream 286125 40735917 ~ 40744474 (+)
LOC120559071 NA coding upstream 304805 40722652 ~ 40725794 (+)
LOC120559372 NA coding upstream 320522 40705318 ~ 40710077 (+)
LOC120559371 NA coding upstream 338977 40673031 ~ 40691622 (+)
LOC120559075 NA coding downstream 201397 41277492 ~ 41278695 (+)
LOC120559076 NA coding downstream 260636 41336731 ~ 41339744 (+)
LOC120558616 NA coding downstream 306992 41383087 ~ 41385076 (+)
LOC120559077 NA coding downstream 325984 41402079 ~ 41423921 (+)
LOC120558621 NA coding downstream 495593 41571688 ~ 41579065 (+)
G56946 NA non-coding upstream 45793 40956420 ~ 40984806 (+)
G56951 NA non-coding upstream 73876 40924330 ~ 40956723 (+)
G56942 NA non-coding upstream 74885 40897055 ~ 40955714 (+)
G56919 NA non-coding upstream 147120 40809094 ~ 40883479 (+)
G56897 NA non-coding upstream 152192 40834219 ~ 40878407 (+)
G56950 NA non-coding downstream 4055 41080150 ~ 41081850 (+)
G56972 NA non-coding downstream 12764 41088859 ~ 41091208 (+)
G56952 NA non-coding downstream 44400 41120495 ~ 41198064 (+)
G56976 NA non-coding downstream 56419 41132514 ~ 41137709 (+)
G56988 NA non-coding downstream 89737 41165832 ~ 41168151 (+)
G56847 NA other upstream 542479 40386328 ~ 40488120 (+)
G56818 NA other upstream 881979 40102385 ~ 40148620 (+)
G56819 NA other upstream 919311 40110458 ~ 40111288 (+)
G56807 NA other upstream 1013284 40016985 ~ 40017315 (+)
G56127 LOC101484296,LOC102207998 other upstream 1018782 39656659 ~ 40011817 (+)
LOC120559073 NA other downstream 23812 41099907 ~ 41103714 (+)
G56947 NA other downstream 43453 41119548 ~ 41136563 (+)
LOC120558563 NA other downstream 1363907 42440002 ~ 42440899 (+)
LOC120558567 NA other downstream 1395801 42471896 ~ 42473941 (+)
zgc:113363 LOC103367255 other downstream 2302251 43378346 ~ 43385991 (+)

Expression


Co-expression Network