G57738


Basic Information

Item Value
gene id G57738
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 43386061 ~ 43391036 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU77621
gctctgttaaaataacaatgaaatgctgcgttattgactttagaccaggtttttgttggtcaatggcgccatcacctcctgctgcctcaagagagtaatactcccagaatgcacctgaacacacctccctgtaagaccagcacgcccagaatgcacctgaacacacctccctgtaagaccagcacgcccagaatgcacctgaacacacctccctgtaagaccagcacgcccagaatgcacctgaacacacctccctgtaagaccagcacgcccatgggccacagatgggcgcaggtgcatttgttatttaaacaacgcgggcgctggacgggaaactgacaactgggtcggtcttaaactagcaaagacacttgcatcgGGCTTTGCACtacgctgggtgcaagataggacccgAAGACTGAATTCAGATGAGCTGAGGCAAAGcatggctgcaactaacgattatttctgttgttgattaatctgttgattattttctggatgaatggatgagttgtttggtctcttaaatgtcagaaaatggtgaaaaatgtggatcagtgtttcccaaaaagccccaagatgacgtcctcaaatgtctggtcttgtccacaactcaaagatcttcagtttcctgtcccagaggagagaagaaactagaacaatattcacatttaacaagctgacatcacacaagttttacttcagttggcgattaatttaatagttgacaactaatcgattcatctttgcagatGATCATCTCTGACTTTGCATCTTCACAGCGTAGAATGTTTTCTGTAATATTCACTATCTCATCTTATTGTTCAGATATCTGTCTCTTTGTTGGGCCGACATTTGGTGCCAACACCGGGAGCAGTGTTTCCTGTATGAGAGCTGACTTCCTGTCGCAGAGCTGCGTTTTTTTCTAAACATATTTTAGACCCctaaaaaagcaaaaggtggctCTGAATTCTAAATTAGTAAAGCACCAGGATAACGTTACACAACGACGATTGTTTTGTGACAGAACATTCACACTTTTGTTCATAAATTCACCCCGTCTGTGTTGCGAGACACCTAGGACAACACAGTTGCTTGGTGGTCACTTCCCTGTGcaaattttaaatgaactaatGTGAGATGATGAGATGATGAAATGATGAAATGAAAGCAAATGTAGACTACACTCCTGCTCCTGAAGCTATCCTGTTGCTTCGAGTGACTCTGCAGCAGATGTTAAAGGGatacaacaacaatatttattaatttaacttattttttaaaagtgctgtagtactGTAGTAATGTAGTACTAGCCtagtgagaccgtcctgatctcgcgagctccagtttcaGCCCgttctcacggcagttcgtgatacggtcacgttattgaatctattgagtcgtggacaggacacgatgATGTCGGTTTTTTTTCGTGCGgcgattacgaattttaaagcaatgtatttctccAATCTGTTTATTAGATTTTCTGACAATAATGATgatgaaacaaaaaacagtgCAAAGGTGGTCCAAGCAGGGTATCATGCATATGTTACAACAAAGAGTACtattaaagcccatgttgcaagtttaattttccaacgaattggtaataaacatttaaaatacatattcatgtatttgatgttgttaggtatcacaaaacagaatataacACGAAAAAGTAgatactattttacagcggtttgtctttcccccacaatgcattgcatgacgtcacgttggggagacgacaGGCGAAAGCCCCGTCTCGGTTCACTGTCCCGGTCACGGTTTCTGCCGCTGGTCTGGCAACGTATGGCTtctggtctcgaccgagtccatgtgtctttattatgtgaataataatattgggggggaagtgaaaggcagcttggacggggatactattcggcttttcacaagtttaaacagctagctaacgatacgccgacgtttgctaacgttagcgcaacagcgttagcttAGACTGCTAGCTAGTTAAATAccggtattacaactgccttcggagctgcgtccacgttgtcaacacaagacatgtggcgttagtgctccttttgtgccatacttttattgaatgaaatattaagcttcgctcctacgaaataggtgttttttttgtaacattacacacaaagctaactggctatagttagcctgtacgtatgctagcgggattagctaacgttgcgtagccagccagcaacttTGGCAATCGGCAGTAGTTTCGGCGAGCTAGCTAACCGCGACAGTATGttgcccacaatcaacctctgctgttaaaagcagtcaatctgcagcgatgttttgaaatggagacacatggatgtgttagctgtcgaggttagctcgccgaagctgcttgctggctatgcaacgttagctaatgtccgctagcatacgtacaggctaactatagccagttagctttgtgtgtaactaactaactaacaaaaaccATCTTGTAGGAGCGAAGTTTaacgtttcattcaataaagttatggtataaaaggagcactaacgccacaagtcttatgttgacaacgtggacgcagatataggaaactccgaaggcagttgtaatatttacctagccggCTAGGCTAatgctgttgcgctaacgttagcgaagcgtcggcgtagcgttagctagctgtctaaacttgtgaaaagctgaacagcatccccgtccaagtaataaataaacaccaggcaaatatgttgttactggagctagtagcctaccatcaaaacgtgagatatcTAATCACGATATCAATCATATCTATGTGTTTACAACCATCGGGGGATTTCACAAgtgggactggcaagttagcacatagctagcatgatgccttgtattttctagatctagataagtttaccggtacttatctgaactaatgacatgatcactgtcactagatataaataaatgttgactttcacttggtgctattcacggacagtaaaaaacccctcttcctcatcccagtcagtcaccatagttacagtaccaggctgatacacgtctccccaacgtgacgtcatcacCGAATTGCGGGAAAAAACCCACTAAtaccaaaaacgacaaaaaacggacaaaaactggcctttaacactatttggagacatttttaacaatgatatacatatattgagtgctatatgtacctattaatcaacagtggtggttaacttgcaacatgggctttaagaCAGTACAAGCACTTAGAAATAAGAcagggaaataaaaaataaatcaggaaaaaaataaaataaaaataaaaagaggggGTCTGTGGGCCAGTCTGTTGCTCCTCATATCATTTCAGTAGTTACATCACTCAGGGATATTTGGAAAATGCACGTCTCGGATGTATTGAAAGAAGGGGTCccatattttattaaattttctCAGTGAGCCCCTTAGTATACACCTAATTCTTTCCAATTTGACAAACCCAAGGacttaaagcaatgtatttcaatgggaagcatatttcgtgatcacagaacgatggcggtagcgagtagtattgatgcGGATTGgtccgcgcagggaggttggtcgggggggggggggatgatggGACCAAACAACACGAGACATTCACCCAGGAGGCCAGGAGATGGCGTCCCGCGTGTTGCCGTTCCTTTCCTCGTTAATCATTTCACCGTTGTCGCGtccccccagagcaggttcgaaaatcgtgacctgtacacgttcaaaattcgGGGCGTGTACACGAAATGAACGTCAAAACCGTGACctgtaaacacaaattaataaatctaaataacgtgactatttcacgacctggcgtgagatcCAGAtgtcccaccgtggtcagaaagaacaggagagacatacacacactataATAATGAAGCTTCACcctgaagctaacgttagcctccAAATAAATGTAGCAAGCTAGGCTACAGAAAAACAAGCTAACATGTTCTAGGTtgtccagtcagtgcccttcaTCAGTAGCCTGGTGggaccgtcctgatctggcgagctccagttttctcctctcagatcagtctggcatcttgagatgagagaaaatttggagccgttcgccaaacgaccgaccaatcagcgttgagttttgaggcgggtttaggcgTGACGCagcgagaagcgactgttcggtctaaacaacgtggcggcttccacggaggagatgagcgtagctatcgcagcaacttttatctgaattagaaagtattccttcattgaaagaagagctaaaaaaaacagcactggaggcttttctcggaggaaaagatgtttcagctcttctcccgactggtttcggcaagaagtttgatctgattggttgatttggccccgtctatcaccaactataggtggtgatagacagatggtttatccaatcagctaaccaggattttcgccccctTCCCAAACGTTCTCCAacagaaagttcccagatggatatgccgagctaatgcgaagcgatccaatctggtggagtcaggttactgtagtacaactaggaggagacaagttatagtggaggtaagtttggagacacttccttatttaatcattaaattaataaatattttagttgtatctcttttcggtgttgtagcttgcagacggtccctaagcactcgtcttactgccgttGTTCATAGCAGCAGAGAGTAGAAgccatcaggcaagtgttatttaaataaactcctggtgtagtttcaaactttccaatccatcgttttatgagtgcataacctatttgtactagtgtagaagtttggtaccattctgggcattattagtggggtcatttacgagtcAAACTTAACGTTTCTATGAAATAAATGCAGTTCTGTGTCGTGTGACAGAGAGGatgatggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77621 True 4933 lncRNA 0.43 2 43386061 43391036

Neighbor

gene id symbol gene type direction distance location
LOC120558444 LOC106456028 coding upstream 32439 43346629 ~ 43353622 (+)
LOC120559837 LOC102799837 coding upstream 183932 43183960 ~ 43202129 (+)
snx21 NA coding upstream 772720 42606040 ~ 42613341 (+)
LOC120558555 NA coding upstream 810651 42562646 ~ 42575410 (+)
LOC120558561 NA coding upstream 972415 42412119 ~ 42413646 (+)
ndnl2 LOC104951562 coding downstream 91886 43482922 ~ 43520837 (+)
LOC120559932 NA coding downstream 126914 43517950 ~ 43518074 (+)
LOC120559090 NA coding downstream 573437 43964473 ~ 43972153 (+)
LOC120559495 LOC103384526,LOC103358296,LOC101487991,LOC102794006 coding downstream 582988 43974024 ~ 43989203 (+)
LOC120559476 LOC102210967,LOC103358300,LOC108245790,LOC107391506,LOC101163152 coding downstream 627968 44019004 ~ 44023950 (+)
LOC120559613 NA non-coding upstream 86277 43298847 ~ 43299784 (+)
G57722 NA non-coding upstream 97460 43287841 ~ 43288601 (+)
LOC120559611 NA non-coding upstream 99613 43282839 ~ 43286448 (+)
G57720 NA non-coding upstream 105058 43280794 ~ 43281003 (+)
G57489 NA non-coding upstream 364115 43008678 ~ 43021946 (+)
G57741 NA non-coding downstream 5148 43396184 ~ 43420499 (+)
G57744 NA non-coding downstream 18031 43409067 ~ 43411504 (+)
G57776 NA non-coding downstream 88181 43479217 ~ 43480285 (+)
G57780 NA non-coding downstream 161164 43552200 ~ 43627435 (+)
G57859 NA non-coding downstream 403853 43794889 ~ 43870023 (+)
zgc:113363 LOC103367255 other upstream 70 43378346 ~ 43385991 (+)
LOC120558567 NA other upstream 912120 42471896 ~ 42473941 (+)
LOC120558563 NA other upstream 945162 42440002 ~ 42440899 (+)
G56947 NA other upstream 2249498 41119548 ~ 41136563 (+)
LOC120559073 NA other upstream 2282347 41099907 ~ 41103714 (+)
LOC120559089 LOC102209886,LOC102308207,LOC103153489 other downstream 449811 43840847 ~ 43953510 (+)
LOC120559493 NA other downstream 590966 43982002 ~ 43984512 (+)
G57886 LOC102210967,LOC101485965,LOC101163152 other downstream 627163 44018199 ~ 44027129 (+)
LOC120559729 usp11 other downstream 659707 44050743 ~ 44098847 (+)

Expression


Co-expression Network