LOC120558319 (wnt7a,LOC103361999,LOC103145089,LOC103385523)


Basic Information

Item Value
gene id LOC120558319
gene name wnt7a,LOC103361999,LOC103145089,LOC103385523
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 16154061 ~ 16162013 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799246.1
GTGAGAAAGAGATAATCGCACTTGCTCACCTCACCAAGAGTTACCTGTGACACCCTCGCAATGACAAGAGGGCCCAGCGAAAGGGGGCCACATAAAGGGAATTTGGATGATACACTAGCCGTCAATTTGTAAAAAGTTTTTCCCGACCgtctactgtttttttaaatgcttttcgTCATTTTGGAGTTCCTTTGGAGTTACCTGGGCTGTGATCGATCGGAGAATAAGCGAACCGAGTTATTCATCAGCTCTTCGGATCGTTGCATGAAACTGAGTGCGGGGCCGCAATGAGTCGGAGAACAAGACGCTGGATTTTAAGAGTTTTACTTTGTCTGggaattgtttatttaaaaattggTGGCTTCTCGTCGGTGGTGGCCCTAGGTGCGAGCATAATCTGTAACAAGATCCCCGGTTTGGCCCCCAGACAACGGATTATCTGCCAGAGTCGCCCCGATGCCATTATCGTCATCGGAGAGGGAGCCCAAATGGGCATCAACGAGTGTCAGTTTCAGTTCAAAAACGGGCGCTGGAACTGCTCTGCGCTTGGAGAGAGGACAGTCTTCGGAAAAGAGTTGAAAGTGGGCAGTAAAGAGGCTGCGTTCACCTACGCCATCATTGCAGCAGGGGTGGCCCACGCCATTACAGCCGCCTGTACACAGGGTAACCTGAGTGACTGTAGCTGTGATAAGGAGAAGCAGGGCTTCTACAGTAAAGACCAGGGCTGGAAGTGGGGAGGCTGCTCGGCAGACATCAGCTACGGCCTGGGCTTCTCCAAAGTATTTATCGATGCTCGGGAAGTCAAACAGAATGCAAGGACACTAATGAACCTCCATAATAACGAGGTGGGACGCAAGGTCCTGGAGAAGAGCATGCGACTGGAATGCAAGTGTCATGGTGTCTCAGGCTCCTGCACCACCAAAACCTGCTGGACTACGCTTCCCAAGTTCCGCGAGCTCGGCTACATTCTCAAGGAGAAGTATGCCCTTGCTGTGCACGTGGAGCCAATCAAAGCCAGCCGCAACAAGCGCCCTAAATTCCTCAAGATCAAGAAGCCTTACTCTTACCGGAAGCCTATGGATACAGACTTGGTGTACATAGACAAGTCGCCTAACTACTGTGAGGCGGACCTTGTGACGGGGAGCTTGGGGACACAGGGCAGGGTGTGTAACAAGACTATGATGCAGCACATCAGCGGCTGTGACTTGATGTGCTGCGGCCGGGGATACAACACACACCAGTACTCCCGCGTCTGGCAGTGCAACTGCAAGTTCCTGTGGTGCTGCTATGTTAAATGCAACACCTGCAGTGAGAGGACAGAGGTGTACACATGCAAATGAGAATATTTATTGgatggtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgatgatGTTTGTGAGCGTGTGGATTCgtgtctttgtgttttcatGGACAAACTGGAACGGTTAAACTTTACAAGAAGGCTGGTATTGCAGTCTTTTCATACATAATGAGGAACTACTGTACTGTGTATACAGTAAGATGAAGATGGGGAGTCCTGATTCTTTTGCACGCAAAGCTCTTCACCCCTCTTCTTGGACTGTTGTGTTCATTGTGTACCCTGGCATGTGGGAGCGGGTGCCCACAGTGTGAGCCAGTGAAACAACAATTTTAAGACTTTTATGCTATATGGACATTTAGCAAATGGACTTTGCCAATGCAAATGCATTATGGTGGATATGATTGCTGGGCAGGACACACTGCTGTAGTTCTCACTCTGTGCGCAGATGAAATGACACAGCCATTTGGAATatttaacatactgtatttagagaatgaaaataattaatattaatttattctATAAAGAAAAAACTACTGATTTTGTCCATTATGGATCAAAAATAACTACATGTTGGGTTTTAGTTTATTAAGGCAATCAAAACTTATCCACACACTTGTTAAAACACTGGATTTGAATCTGCCTGGAATAATGTGTTTTAGAATGTTTTTCCAGATGAAACTGGATGTAGGCTACTCACATTGACCTTCTGACCCTCTCATGAGTTTGTCTTCCCTCTGTTTGCTGCTAGTCTAGAGAATCCCACTTGTTGAGGTCGAAGGCTGTGCGCTCTACTTACTGTCTTCAATGGCATTGCTTACTTCAAGCCAATTTAGCTTAACAGGACTTATTCACTGATCAAAAACACAGGCACATTTTCCACTTTTGGTAAATATTGGTTCATAGagtatattttgtaaaagcctatttttatatgaatgtcttatttatatattttgcaTATTCAATGTCAAGTTCTGACTCTGACACCTGTGTTAAAATCCCTGTGAAAAAAGCTGATATATGTAAGTTGGCCCCTGCTGTCTGTCACTGCCATAGTTGCATATTGTAAGTGATAGAAACTgtttatatgtgtctgtgtttactgCGTTTCATGACTACTACTGATGAAATACAGGAACAGAATAAcactaaaaataaatgattttcaTTA

Function

symbol description
wnt7a Enables cytokine activity. Involved in several processes, including cartilage development; embryonic limb morphogenesis; and regulation of synapse assembly. Is active in glutamatergic synapse. Implicated in Fuhrmann syndrome and Schinzel type phocomelia. Biomarker of leiomyoma.

NR:

description
PREDICTED: protein Wnt-7a

GO: NA

KEGG:

id description
K00572 WNT7; wingless-type MMTV integration site family, member 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799246.1 True 2536 mRNA 0.45 4 16154061 16162013

Neighbor

gene id symbol gene type direction distance location
nup210 NA coding downstream 58258 16066540 ~ 16095803 (-)
LOC120558787 iqsec1,LOC101467973,LOC100710993,LOC102777856,LOC106948087,LOC103145094,LOC102305730 coding downstream 92165 15968560 ~ 16061896 (-)
gp9 NA coding downstream 189156 15963557 ~ 15964905 (-)
raf1a raf1 coding downstream 203031 15937829 ~ 15951030 (-)
vgll4a LOC104958739,LOC104940214,LOC103368777 coding downstream 233518 15910598 ~ 15920543 (-)
ptpdc1b LOC103361997,LOC104940250,LOC102303597,LOC101466018,LOC102203312 coding upstream 4292 16166305 ~ 16173032 (-)
LOC120558718 LOC104966685,LOC103361981,LOC102294611,LOC102076950,LOC102210297 coding upstream 262207 16424220 ~ 16425947 (-)
mbd4 mbd4 coding upstream 264057 16426070 ~ 16429565 (-)
plxnd1 plxnd1 coding upstream 298237 16460250 ~ 16526652 (-)
tmcc1a tmcc1,LOC102793771 coding upstream 366505 16528518 ~ 16577086 (-)
G50143 NA non-coding downstream 197389 15952530 ~ 15956672 (-)
G50153 LOC101174347 non-coding downstream 220763 15930121 ~ 15933298 (-)
G50136 NA non-coding downstream 258061 15879334 ~ 15896000 (-)
G50138 LOC104940213,LOC103368778,LOC102235665 non-coding downstream 263944 15886890 ~ 15890117 (-)
G50104 NA non-coding downstream 465634 15685011 ~ 15688427 (-)
G50230 NA non-coding upstream 124308 16286321 ~ 16379623 (-)
G50278 NA non-coding upstream 254908 16416921 ~ 16418613 (-)
G50371 NA non-coding upstream 418063 16580076 ~ 16580982 (-)
G50378 NA non-coding upstream 498985 16660998 ~ 16663045 (-)
G50382 NA non-coding upstream 504037 16666050 ~ 16679676 (-)
G49845 naca,LOC107737655,LOC106571941 other downstream 1300244 14845338 ~ 14853817 (-)
map3k12 LOC104930685,LOC103358642 other downstream 1602503 14539788 ~ 14551558 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other downstream 1619456 14532124 ~ 14534605 (-)
LOC120558545 LOC104942567,LOC103358644 other downstream 1721067 14416336 ~ 14432994 (-)
LOC120558710 NA other downstream 2008839 14140380 ~ 14145222 (-)
G50217 fgd3,LOC104966710 other upstream 119031 16281044 ~ 16283856 (-)
LOC120559328 smim4 other upstream 944821 17106834 ~ 17115047 (-)
G50712 birc7 other upstream 1526102 17688115 ~ 17689760 (-)
zbtb46 zbtb46,LOC102795869 other upstream 1673067 17835080 ~ 17895082 (-)
samd10b samd10,LOC107570869 other upstream 1812280 17974293 ~ 18101572 (-)

Expression


Co-expression Network