rpl32 (rpl32)


Basic Information

Item Value
gene id rpl32
gene name rpl32
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 17242880 ~ 17246203 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799285.1
AAAGAAATGTAAATTTCAGTGGATCAAAACCGTTTTCAAGTACTGTAGTTCTGATAAAATACAGTACCCATAAGCCTTTGCAACACTCACGGAAGTCCTTTTCTTTCCTTCCGCCGTCGCTGAGGTCCCTTTTTGGATTTACATCGGCGGTCACCATGGCAGCCCTCAGGCCCCTCACAAAGCCCAAGATTGTCAAAAAGAGAACCAAGAAGTTCATTCGCCATCAATCTGACCGATATGTCAAGATTGCGAAAAACTGGCGTAAACCCAGAGGTATTGACAACAGGGTCCGCAGGCGGTTCAAGGGTCAGATGCTGATGCCCAACATCGGTTATGGTAGCAACAAGAAGACCAAGTACATGCTGCCCACTGGCTTCAAGAAGTTCCTGGTGCACAATGTCAAGGAGCTCGAGGTCCTGATGATGAGTAACAAGACTCACTGTGCTGAGATCGCCCACAACGTCTCATCTAAGAACAGGAAGGTGATCGTGGAGAGGGCAGCTCAGCTGGCCATCAAGATTACCAACCCCAACGCCAGGCTCAGAAGCGAGGAGAACGAATAAACTGGTTATTACccaataaatgtttaaaaattgAAA

Function

symbol description
rpl32 Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Orthologous to human RPL32 (ribosomal protein L32).

NR:

description
PREDICTED: 60S ribosomal protein L32

GO:

id name namespace
GO:0006412 translation biological_process
GO:0005840 ribosome cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K02912 RP-L32e, RPL32; large subunit ribosomal protein L32e

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799285.1 True 599 mRNA 0.47 4 17242880 17246203

Neighbor

gene id symbol gene type direction distance location
LOC120558336 LOC103354442 coding downstream 2137 17209216 ~ 17240743 (-)
LOC120559621 LOC104935447 coding downstream 80832 17158804 ~ 17162048 (-)
si:ch73-233m11.2 NA coding downstream 85330 17153488 ~ 17157550 (-)
slmapb LOC103354436,LOC104935421 coding downstream 100936 17130282 ~ 17141944 (-)
abhd6b abhd6,LOC103354432 coding downstream 118593 17119666 ~ 17124287 (-)
LOC120559574 LOC104961988,LOC104935553,LOC102207720,LOC101165305 coding upstream 79004 17325207 ~ 17358698 (-)
LOC120559199 grm7,LOC104935569,LOC103354449,LOC101484945 coding upstream 158899 17405102 ~ 17520570 (-)
tasorb LOC103354451 coding upstream 275725 17521928 ~ 17542122 (-)
asb14b LOC100700796,LOC102307994,LOC103354452,LOC102775635,LOC102205832,LOC101483549 coding upstream 296396 17542599 ~ 17546306 (-)
dnah12 dnah12 coding upstream 301000 17547203 ~ 17572201 (-)
G50561 NA non-coding downstream 37251 17203747 ~ 17205629 (-)
G50567 slc6a6,LOC106905582,LOC103145023,LOC101165803 non-coding downstream 49245 17190077 ~ 17193635 (-)
G50553 NA non-coding downstream 89453 17152200 ~ 17153427 (-)
G50549 NA non-coding downstream 90942 17151317 ~ 17151938 (-)
G50548 NA non-coding downstream 92829 17148206 ~ 17150051 (-)
G50574 NA non-coding upstream 4447 17250650 ~ 17251274 (-)
G50647 NA non-coding upstream 224004 17470207 ~ 17470675 (-)
G50709 NA non-coding upstream 436845 17683048 ~ 17683519 (-)
G50779 LOC102310871,LOC107096010,LOC102797073 non-coding upstream 536485 17782688 ~ 17786360 (-)
G50803 prpf6,LOC107673318,LOC102793577 non-coding upstream 794206 18040409 ~ 18041404 (-)
LOC120559328 smim4 other downstream 127833 17106834 ~ 17115047 (-)
G50217 fgd3,LOC104966710 other downstream 959024 16281044 ~ 16283856 (-)
G49845 naca,LOC107737655,LOC106571941 other downstream 2389063 14845338 ~ 14853817 (-)
map3k12 LOC104930685,LOC103358642 other downstream 2691322 14539788 ~ 14551558 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other downstream 2708275 14532124 ~ 14534605 (-)
G50712 birc7 other upstream 441912 17688115 ~ 17689760 (-)
zbtb46 zbtb46,LOC102795869 other upstream 588877 17835080 ~ 17895082 (-)
samd10b samd10,LOC107570869 other upstream 728090 17974293 ~ 18101572 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other upstream 1628552 18874755 ~ 18886895 (-)
kcnd3 kcnd3,LOC102776651,LOC102303593,LOC100697611,LOC101470631 other upstream 1699765 18945968 ~ 19077781 (-)

Expression


Co-expression Network