spata2 (spata2)


Basic Information

Item Value
gene id spata2
gene name spata2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 18335401 ~ 18340591 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799288.1
GAACTGTGCGCATGCGTGTTATGATGATGGGAATTTCCAACAGCTGAGTCTATGCTGAGGAGGCGTAGCTAGCCATGGCTAGCACTTGTTAAAGCTTGGAGACGGCTCAGAAGAATCACATAATCGTGAATGTGTCTTCATGATGAGTGACCTTGAACTCTGCACATGTTGAAACCAAGGAATGGGATAGATACAACTCTGCATTAACAGAGCATGAAGCAAACGCTCCTCCTGTTCGTCTGAAAACAAGTCAGGCTTTGAGCCAGTACCAAAGATGCCCATAAGAAGGCATCCCTACAGGCTGCAGCCTAGCTACGCCAACTGAAAGCTCCATGCAACTGCATATAATGTTTAAAGGATGCACTGCTGATTGGATGCAGAATCTCATTCTTCTTCCACCTCTCCAAAACATTAACGTTGAGTCTGTGCCAGCGTTTACAGTGAATTATGGTGACCAAAAATGGTGCTTGAATGTGGCATCCTGGTGCAGAGTATGCTAAAAGGGGTGAGGCTCTTTCAGAAAAGTGTAACAGCCGACTGATAGTCTGCTGCCGATAATGGATGCCAAGTTGAAAGAGGACCTGTTTCGAAGGTATGTGACAGCACTGGAGAGGCGTCTGGAGGATGGAGGGGAATACACAGGGACAGGAACAACAccagaggaggacagagggagacacaAGGACAGTGAGGCACTACTCTCCACAGCTACAGCTCTGCTAGGGGCCTACCAGCCTGATCCGGGACAACGTTTCCGGATGGTGCGTTTTTATGAAGTGGTGGAAAATGCTCTCCGCTGCCAGAGAGGCGGCAACATCAAGAGCCTGGAGAGAGCCTTCCACACATTGGAAACCATCTGCACCAACCTCTTGCTCTATCCCTGGAAGAAGGAGTTCAGATGTATAAAGACCTTCACTGGCCCATATGTGTACCATCTGCAGTCTGCCATTTGTGATGCTGAACTCCGAACTCTTATGCGCACCATTGGCTATGCCTGTGACCATGATTCGCAGTTCCATTTGCAGGAGCACCCAGGAGGCACAAATCATCTCCGGCAGTTGGCGTTTGAGCTCTTCCTGGCCCAGGCAGAGTGTCGTCTTCTGAGAGAAGTAGTGGCTCTGGCCCGTGGTTCGGCTTCAGAGCTGGAGGCCCTGGAACTCCGAAGAGGCTGCAGGGATGATGCAGCTGGCTGTGCTGAGGCGCTCCGCAGACGCGACAGCCTTGGGGCAGATATGGCTCGGCTGTCTGTGCGGCCGTTAGATATAGAGAGGCCTCATGCCCACCACCTGAGGCGAGGTAGCCGACCGTCTAAGTCTGTGGATGTTACAGATGGGGCTGGTCACTGGCACGCAGCAGTTAGCAAGCCTGTCTTGAAGGCCTCATTGAGTCTGAGGAAGGAGCCTCTGTTTGTGGATGCGGAGGAGGATATGAAGGATGAGATCATCAGGCCCAGTACCTCAGCATCTCTGTTCTCTGTGGCAGCTCCGCCTTCCTATAGCCCTATTGCGGATTTCTTTCCAATTCAGTCGCCTCCCCTGGCCGATGCTTACACATCCTACCACCTGTCTTCTTTGGATGAGATTGACTTGTACACAGAGAGGGGTGTTGGGACAGGAGGAAGGCAGACCCCCTCGCGACCTCCATCCAGAGAGCCTCGGGATGTAAGGGATGGGTGGCTACTCAAACCTCATGGTAGTGTGAAGTGTCAGGGCTGTGGGCTTGGCTGCTCCTCTATGGCCTCCTGCCAGAGATGTGACATGATCCTCTGTTCTGCCTGTCATGATGTGGACCCCTCCCCTTGTTGCGGCCTCCAGGACTACCACCCAAAATCCCCACGACCCCTCGATGGATACATTCCTGTTAAGGAAAAGCTCTCAGTCTACTCTAACACTCACTCCCACTCCCATCTCCATCCGCACCCCCTCACACTGACCCACTCACACtctcacccccacccccacccccagatGGTGGAGAAACCCCTCATGTCCACAAAGCTGTTTGCAAGCAAGTCTATTGCCTTGACCACCCCAAAGGGAGGCAGCACTGAGCGAATAAGCATGGGGGGATCGCGATGCGGGTTTTGCAACAAGCCAGGGGCATCCCACACCTGTGTGAACTGCTCTAAGGTGTCATGTGACTCATGCATGGGCTTGTATGCAAAAGATATTTGCACGCGAAAAAATCCCCAACACAGCTTTGTGCCCAACCATCAGCTCAACTTCAAATCTGGCACCATATCTCACCTGGTGTACCGATGAATCAGGCATGGATCAAAATATTTGTTTCTCCCTTCTATTCCCCTCCCTTAACCTGCTGCATAGTCTTGCACTATTGCTTTAGCTCTGTTCCGGTTTAAATAACTCATTCACTATCTTCCCCTTAACTGATGGTCTTTTGGCCCTATGGAACCCTCTCTTGAACTTTGTACATTTTCTCTTACAGTCAGTAGGGCCCTGGAATGCACTTGCCACAGAGAGCAATATCGTCTGTCCATCTCTCTGCCTTGTACAAGTTCAGGCCTTTTatctatttcttcttctttttacctTGCTACCTGCTCTTGAGTAGTCATGTGATGTTGTAGCGCTTCCCCAATTCCTTAAATTTTGTCCTCCTCAAAAGGGAAACTGAAGAAGATAGTTTAATTCCTTCTCATTTTGAATGAATTATGTCCAAATGAACATATATACTTTGCCTAACTTCTCAGCTAAAAATTCctctaatatataaatatatatatatatatatatatacagtatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagtgagtgagtgtgtgtatgtatgtagaaAAGACCTCTGAGCTTGCATACTGACACAGGAGATCTTTTTAAACTTGAAAAATAGTAGGAGAAAACATAACACTGGAAGTCAATTAGTCAATAGTATATATTTTTAATCTCTATTCTCTAGAACAATGTGAGACTGTTAAATGGGCATGAGGTCTGGCATTGGGAGTTTTGGGGTATAAACTTATGTCCGCGGGCTCGGGTGGATGATATCTCAAAGGGACATATTGAGACAATGGTTAGATGCCATATATTCTATTTAAAAGATTATGCCTTGTAAATTAACCCTCAATTGTTTCTGGTGATATGACTGAGGTTTAAATGCTGCTGTTGACTTGAAGATGTGTGGCGTTGACTTCTTTCTGGTAAATAGCCTGTTGAGTTGTGTCAGTTCCAAGCACCCCATTCCCTTTCATTACACTC
>XM_039799289.1
CTCTAAGCTGAATCAGAATTAGACTTGGTCGTTCAAGAGTCATGCCACTATGACGGTATAACGTTATGTTTACAAAATTTGCCAAAGATGTCTATCTAGCGATGGACCGCCCTGCTAGCCAAAGCAATTGTTAGCTAGCCAGCTGCGCTGAAATGGGCGTTCACTGCTTAGCCGATACTCAGGTGTGGGCCCGTGACAGGATCGGGTTCTGTGGGTTTGAGATTAATGAAGACTTAATGTATACGCTGTCCTACGGGCGTCTATCATATTATTAACATCGGTCATGAGGGAGCGATTCTGTTGCAGTTAATGCGCAATATTAATGCACGGTGATgttgttagctaacgttaaggcATGTTGCTCGCTAGCTCGCTAAACGGATGCTCACTCGGTTGGTGTGTGAGGTAACTGGAATAGCTGGTCAACTTGCCTGGGAACGAGGAGCAGAAACACTCAGCTGATGTGGTTCAAGCTTCAAGCTTACAACCATCCATATTCTCACATCCGTATAAATATTGCGTTCTTAATTTGAGCTAACTAAAGCTAAAGCTAAGTGCAGGCTACCATGGTTTACACGCATGTTGTACCCATAGGTTTTACTGCTGGCTCACATATTCACTTGCGCAAGAATAAGGGATATGTCTGTCAACCGTGAGTCCCAATCCTGGTTATGTACACTGTTATTCCTCTAGTGTTTTTCTTGGTTGCGTATATCTTGATAATCAGTCAAACCTATTAGCTGTACGAGCGACCTAAAAATAGCCCACACGATGAACCCATCAGAGAACACACTGTTTTTCAAAATAGTGATGTCTACACACCCTCTTTCTTGTTTGAGTCATTGCAGATTTAAAGAATACTCTTGTTAATGATCGTTGcaaatgcattttcttttggACTGAATTAACACTACTGACTTGGAGACGGCTCAGAAGAATCACATAATCGTGAATGTGTCTTCATGATGAGTGACCTTGAACTCTGCACATGTTGAAACCAAGGAATGGGATAGATACAACTCTGCATTAACAGAGCATGAAGCAAACGCTCCTCCTGTTCGTCTGAAAACAAGTCAGGCTTTGAGCCAGTACCAAAGATGCCCATAAGAAGGCATCCCTACAGGCTGCAGCCTAGCTACGCCAACTGAAAGCTCCATGCAACTGCATATAATGTTTAAAGGATGCACTGCTGATTGGATGCAGAATCTCATTCTTCTTCCACCTCTCCAAAACATTAACGTTGAGTCTGTGCCAGCGTTTACAGTGAATTATGGTGACCAAAAATGGTGCTTGAATGTGGCATCCTGGTGCAGAGTATGCTAAAAGGGGTGAGGCTCTTTCAGAAAAGTGTAACAGCCGACTGATAGTCTGCTGCCGATAATGGATGCCAAGTTGAAAGAGGACCTGTTTCGAAGGTATGTGACAGCACTGGAGAGGCGTCTGGAGGATGGAGGGGAATACACAGGGACAGGAACAACAccagaggaggacagagggagacacaAGGACAGTGAGGCACTACTCTCCACAGCTACAGCTCTGCTAGGGGCCTACCAGCCTGATCCGGGACAACGTTTCCGGATGGTGCGTTTTTATGAAGTGGTGGAAAATGCTCTCCGCTGCCAGAGAGGCGGCAACATCAAGAGCCTGGAGAGAGCCTTCCACACATTGGAAACCATCTGCACCAACCTCTTGCTCTATCCCTGGAAGAAGGAGTTCAGATGTATAAAGACCTTCACTGGCCCATATGTGTACCATCTGCAGTCTGCCATTTGTGATGCTGAACTCCGAACTCTTATGCGCACCATTGGCTATGCCTGTGACCATGATTCGCAGTTCCATTTGCAGGAGCACCCAGGAGGCACAAATCATCTCCGGCAGTTGGCGTTTGAGCTCTTCCTGGCCCAGGCAGAGTGTCGTCTTCTGAGAGAAGTAGTGGCTCTGGCCCGTGGTTCGGCTTCAGAGCTGGAGGCCCTGGAACTCCGAAGAGGCTGCAGGGATGATGCAGCTGGCTGTGCTGAGGCGCTCCGCAGACGCGACAGCCTTGGGGCAGATATGGCTCGGCTGTCTGTGCGGCCGTTAGATATAGAGAGGCCTCATGCCCACCACCTGAGGCGAGGTAGCCGACCGTCTAAGTCTGTGGATGTTACAGATGGGGCTGGTCACTGGCACGCAGCAGTTAGCAAGCCTGTCTTGAAGGCCTCATTGAGTCTGAGGAAGGAGCCTCTGTTTGTGGATGCGGAGGAGGATATGAAGGATGAGATCATCAGGCCCAGTACCTCAGCATCTCTGTTCTCTGTGGCAGCTCCGCCTTCCTATAGCCCTATTGCGGATTTCTTTCCAATTCAGTCGCCTCCCCTGGCCGATGCTTACACATCCTACCACCTGTCTTCTTTGGATGAGATTGACTTGTACACAGAGAGGGGTGTTGGGACAGGAGGAAGGCAGACCCCCTCGCGACCTCCATCCAGAGAGCCTCGGGATGTAAGGGATGGGTGGCTACTCAAACCTCATGGTAGTGTGAAGTGTCAGGGCTGTGGGCTTGGCTGCTCCTCTATGGCCTCCTGCCAGAGATGTGACATGATCCTCTGTTCTGCCTGTCATGATGTGGACCCCTCCCCTTGTTGCGGCCTCCAGGACTACCACCCAAAATCCCCACGACCCCTCGATGGATACATTCCTGTTAAGGAAAAGCTCTCAGTCTACTCTAACACTCACTCCCACTCCCATCTCCATCCGCACCCCCTCACACTGACCCACTCACACtctcacccccacccccacccccagatGGTGGAGAAACCCCTCATGTCCACAAAGCTGTTTGCAAGCAAGTCTATTGCCTTGACCACCCCAAAGGGAGGCAGCACTGAGCGAATAAGCATGGGGGGATCGCGATGCGGGTTTTGCAACAAGCCAGGGGCATCCCACACCTGTGTGAACTGCTCTAAGGTGTCATGTGACTCATGCATGGGCTTGTATGCAAAAGATATTTGCACGCGAAAAAATCCCCAACACAGCTTTGTGCCCAACCATCAGCTCAACTTCAAATCTGGCACCATATCTCACCTGGTGTACCGATGAATCAGGCATGGATCAAAATATTTGTTTCTCCCTTCTATTCCCCTCCCTTAACCTGCTGCATAGTCTTGCACTATTGCTTTAGCTCTGTTCCGGTTTAAATAACTCATTCACTATCTTCCCCTTAACTGATGGTCTTTTGGCCCTATGGAACCCTCTCTTGAACTTTGTACATTTTCTCTTACAGTCAGTAGGGCCCTGGAATGCACTTGCCACAGAGAGCAATATCGTCTGTCCATCTCTCTGCCTTGTACAAGTTCAGGCCTTTTatctatttcttcttctttttacctTGCTACCTGCTCTTGAGTAGTCATGTGATGTTGTAGCGCTTCCCCAATTCCTTAAATTTTGTCCTCCTCAAAAGGGAAACTGAAGAAGATAGTTTAATTCCTTCTCATTTTGAATGAATTATGTCCAAATGAACATATATACTTTGCCTAACTTCTCAGCTAAAAATTCctctaatatataaatatatatatatatatatatatacagtatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagtgagtgagtgtgtgtatgtatgtagaaAAGACCTCTGAGCTTGCATACTGACACAGGAGATCTTTTTAAACTTGAAAAATAGTAGGAGAAAACATAACACTGGAAGTCAATTAGTCAATAGTATATATTTTTAATCTCTATTCTCTAGAACAATGTGAGACTGTTAAATGGGCATGAGGTCTGGCATTGGGAGTTTTGGGGTATAAACTTATGTCCGCGGGCTCGGGTGGATGATATCTCAAAGGGACATATTGAGACAATGGTTAGATGCCATATATTCTATTTAAAAGATTATGCCTTGTAAATTAACCCTCAATTGTTTCTGGTGATATGACTGAGGTTTAAATGCTGCTGTTGACTTGAAGATGTGTGGCGTTGACTTCTTTCTGGTAAATAGCCTGTTGAGTTGTGTCAGTTCCAAGCACCCCATTCCCTTTCATTACACTC

Function

symbol description
spata2 Predicted to be involved in several processes, including protein deubiquitination; regulation of necroptotic process; and regulation of tumor necrosis factor-mediated signaling pathway. Predicted to act upstream of or within programmed cell death. Predicted to be located in nucleus. Predicted to be active in cytoplasm. Is expressed in several structures, including brain; digestive system; head; otic vesicle; and pleuroperitoneal region. Orthologous to human SPATA2 (spermatogenesis associated 2).

NR:

description
PREDICTED: spermatogenesis-associated protein 2

GO: NA

KEGG:

id description
K17595 SPATA2; spermatogenesis-associated protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799288.1 False 3254 mRNA 0.48 3 18335401 18340591
XM_039799289.1 True 4077 mRNA 0.47 3 18335401 18340457

Neighbor

gene id symbol gene type direction distance location
b4galt5 b4galt5,LOC104935810,LOC102792691,LOC100696774 coding downstream 145186 18160174 ~ 18190215 (-)
znf512b znf512b coding downstream 364488 17936494 ~ 17970913 (-)
uckl1b uckl1,LOC102795005,LOC103372048 coding downstream 399730 17915256 ~ 17935671 (-)
nkain4 nkain4,LOC106924573 coding downstream 598573 17689955 ~ 17736828 (-)
LOC120558364 ythdf1,LOC107096006,LOC105906423 coding downstream 653044 17671661 ~ 17682357 (-)
dhx35 dhx35,LOC102790768 coding upstream 263053 18603644 ~ 18611600 (-)
rab5if c10h20orf24,LOC104925093,LOC102790476,LOC103366025,LOC101470883 coding upstream 272738 18613329 ~ 18618762 (-)
plcg1 plcg1 coding upstream 295984 18636575 ~ 18668749 (-)
top1 LOC103366028 coding upstream 330083 18670674 ~ 18686422 (-)
ncoa6 ncoa6 coding upstream 346182 18686773 ~ 18700011 (-)
G50915 NA non-coding downstream 15796 18319313 ~ 18319605 (-)
G50912 NA non-coding downstream 19548 18315592 ~ 18315853 (-)
G50879 NA non-coding downstream 29502 18305072 ~ 18305899 (-)
G50877 NA non-coding downstream 30764 18304315 ~ 18304637 (-)
G50872 LOC103364157,LOC108235200,LOC103467481 non-coding downstream 36047 18298976 ~ 18299354 (-)
G50932 NA non-coding upstream 27436 18368027 ~ 18368370 (-)
G50941 NA non-coding upstream 134318 18474909 ~ 18475712 (-)
G50945 NA non-coding upstream 163878 18504469 ~ 18505016 (-)
G50991 NA non-coding upstream 293874 18634465 ~ 18635235 (-)
G51064 NA non-coding upstream 372084 18712675 ~ 18713213 (-)
samd10b samd10,LOC107570869 other downstream 233829 17974293 ~ 18101572 (-)
zbtb46 zbtb46,LOC102795869 other downstream 440319 17835080 ~ 17895082 (-)
G50712 birc7 other downstream 645641 17688115 ~ 17689760 (-)
LOC120559328 smim4 other downstream 1220354 17106834 ~ 17115047 (-)
G50217 fgd3,LOC104966710 other downstream 2051545 16281044 ~ 16283856 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other upstream 534164 18874755 ~ 18886895 (-)
kcnd3 kcnd3,LOC102776651,LOC102303593,LOC100697611,LOC101470631 other upstream 605377 18945968 ~ 19077781 (-)
LOC120558911 LOC103362803,LOC100693258 other upstream 1458614 19799205 ~ 19815318 (-)
LOC120558386 hoxc10,LOC100690382 other upstream 2479580 20820171 ~ 20952518 (-)
fmnl3 fmnl3 other upstream 2827313 21167904 ~ 21199043 (-)

Expression


Co-expression Network