LOC120558369


Basic Information

Item Value
gene id LOC120558369
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 3952301 ~ 3954770 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799344.1
ATCCCCCTTCCGCCATTTTGAGCTGCTCatgttcattgtttgtgttggttGCCTAGGTCTTGGTGTTTCGCTGTTCTAGAGAATTCAACTATTTTAGAATGCCCGGAACACACTGCTGTGTAAGAAACTGCTTCAGTTCCACACACGATTACCGTGGAAAGCGTAGGGACCACGTGTTACGGTTTTTTCGTATCCCTACGTGGAAAAAGCACGAAGGCGAGCATGTGTCCGACGTGACAAGGAGACGTCGGATGTCTTGGGTGGCTGCAATTAGGAGAAAGGACATTACTTTCGACCGCATCTCCCAGTCGATGAGAGTGTGTTCTCTGCATTTTCATTCGGGTAAACCATCATATGAGATGTTGGAGAACCACCCTGACTGGAAACCATCTTTGCGGTTAGGCCACAGTGATGTTAAGGAAACCGATGAAGCGAGATTTCAGCGGCTAGTAAAGCGCAGGACCCAGCACCAGGAGCAGCTGTTGCTGCCGCCACCGCAGCACCAGGAGCAGCCGCCATCCCCAGCGCAGCACCCTGAACAAGCGCCACCgttggcgcagcatcgggagcaGCCGCCATGCCCAGCGCAGCACCAGGAGCAAGCGCCGCCGTCGGCACAGCATCGGGAGCAGCCGCCATGCCCAGCGCAGGTGCAAGCGCCGCTATCGGCACAGCAGGAGCCGGCCCAGGAATGTGCACTTTGCCCATATAGACGAGATGTTATCAACTGTCTTTTGGAGGAAAACAGAAAGCTGAAGGAGGAGCTTGAAGAGTACCGGATGAACGAGAACTTTCTGAGCGGTGATGATGACAGAGTGAAGTATTACACGGGACTCCCGAATTACTTAACGTTTCAGACACTTCTACTCAGTCTCACGCCATATCTGCCTCAGGGTAGGTTGAAGAAGCTCTCCCCCTTCCAGCTTGTCCTGTTGACTCTCATGCGCCTCAGACTGGACCTGCCAATACAGCACCTCGGCCGTCTGTTTCGGGTGCACAGGACGACCGCCAGCGATGCCTTTCACCACACTCTCGGCGTGATGTACTCCCGGCTGTCTCCGTTGGTGTACTGGCCAAGCAGGGAGAGTTTATTGGCCAGTATGCCACACAAGTTTGTGGAATCGTTCGGGGAAAATGCGGCTGCCATCATGGACTGTTttgaggtttttattgaaaaaccCTCAAATGCACTCGCAAGGGCACAGACTTTTTCTCAGTATAAACACGCGCACACCATGAAATACCTCATTGTGATTACACCCCAGGGTGTCATTTCTTTCATATCCGAAGGGTGGGGTGGGCTCGCGAGTGACAAACATATAACGGAGCAAAGTGGTTTCCTGGACAAACTGATGCCAGGTGACGTTGTGCTGGCAGATCGGGGATTTGACATCGGGGAAAGCGTGGGTATGATGTGTGCTGAGGTTAAGGTACCTCCAAGGGGCCGAGCGCAGCTGGAGGCGAGAGACGTGGAGGAGGCTGGGGCCACGGCACATCTCAGGATTCACGTGGAGAGGGTGATCGGTGTCGTGCAGGACACATTTAAATTCTTGCGCTCAACTGTACCGGTGAACatgcttctcaaatgtgaaggtGAAAACGTAGTGGCGTTGGACAAGATCGTCACCGTTTGCTGTGCCTTGACAAATGTGTGCAAAAGTGTCGTCTGAGTGCggactttgttttgtttaaactgAAGTTGGATCTAATCTGCTGTGAAATGACAGTTGAAATACATTCTTGAAAACAA

Function

GO: NA

KEGG:

id description
ko03018 RNA degradation

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799344.1 True 1750 mRNA 0.52 2 3952301 3954770

Neighbor

gene id symbol gene type direction distance location
si:dkey-16n15.6 LOC103362245 coding downstream 24145 3913993 ~ 3928156 (-)
LOC120559452 suv39h1,LOC102791492 coding downstream 42531 3880310 ~ 3909770 (-)
foxp3b NA coding downstream 142396 3771053 ~ 3809905 (-)
trappc6b trappc6b coding downstream 206688 3735499 ~ 3745613 (-)
LOC120559443 LOC103362253,LOC101473498 coding downstream 323528 3564509 ~ 3628773 (-)
asxl1 LOC102292987,LOC107098928 coding upstream 28503 3983273 ~ 4005648 (-)
LOC120559100 LOC100709480,LOC103374188,LOC101478014,LOC102305352,LOC102202239,LOC102794305 coding upstream 328418 4283188 ~ 4381061 (-)
efhd2 efhd2,LOC102781412 coding upstream 722930 4677700 ~ 4705540 (-)
LOC120558499 LOC105418166,LOC101068103,LOC108412963,LOC106522608,LOC108431938,LOC105419408,LOC106674638,LOC108415465 coding upstream 1252452 5207222 ~ 5218713 (-)
LOC120559579 LOC103144399 coding upstream 1783551 5738321 ~ 5741953 (-)
G47043 NA non-coding downstream 21638 3930310 ~ 3930663 (-)
G47042 NA non-coding downstream 22862 3929139 ~ 3929439 (-)
G47033 NA non-coding downstream 26282 3879072 ~ 3926019 (-)
G47005 NA non-coding downstream 74944 3876200 ~ 3877357 (-)
G47004 NA non-coding downstream 78532 3873551 ~ 3873769 (-)
G47083 NA non-coding upstream 12006 3966776 ~ 3969129 (-)
G47091 NA non-coding upstream 26407 3981177 ~ 4012698 (-)
G47092 NA non-coding upstream 95740 4050510 ~ 4059713 (-)
G47093 mfn2,LOC102789666 non-coding upstream 97947 4052717 ~ 4055342 (-)
G47122 NA non-coding upstream 242018 4196788 ~ 4197049 (-)
LOC120559679 LOC103384848,LOC102790723,LOC100693496 other downstream 2130 3934511 ~ 3950171 (-)
LOC120559401 NA other downstream 458338 3491004 ~ 3493963 (-)
G46817 NA other downstream 666378 3283041 ~ 3285923 (-)
G46698 NA other downstream 1604797 2346505 ~ 2347504 (-)
LOC120559407 NA other downstream 1616600 2329654 ~ 2335701 (-)
G47058 NA other upstream 256 3955026 ~ 3955529 (-)
G47059 LOC102202574 other upstream 834 3955604 ~ 3956382 (-)
dedd dedd,LOC103374682 other upstream 636677 4591447 ~ 4621836 (-)
G47252 NA other upstream 775731 4730501 ~ 4731141 (-)
G47254 NA other upstream 778026 4732796 ~ 4733285 (-)

Expression


Co-expression Network