nkain5 (LOC103354565,LOC101477820)


Basic Information

Item Value
gene id nkain5
gene name LOC103354565,LOC101477820
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 12271487 ~ 12280037 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799384.1
ATACCGCCTCCCCTCCCCCTGCTCCGTAGTTCCCACTCAGGGACAGCCTACGTGTTTTCCTCAGGAGCTGAAGTGCGCTGTGCGTTTCCTCACACATCTGGAGAATATGGACCTAACGCTTGTGTTTGAGCATTAAAAAACACAATCGAGTTACTTCACTGCACTTTTccccatcatcttcatcatcttaATCAGAGCCAGCGggagcaggaaggagaggaagatgGGCTGCTGCTCGGCACGATGCATGTTGATCCTCCTGTGTTCTCTGCAGTTGATCACTGCGCTGGAGAGGCAGGTATTTGACTTCCTCGGCTACCAATGGGCTCCCATCATGATCAACTTCTTCCACGTCATCGTGGTCATCCTGGGCCTGTTTGGTGTCATCCAGTACAGGTCACGCTACGTCATTATGTACCTGCTGTGGATGCTGTTGTGGGTCGGCTGGAATGTCTTTGTTAGCTGTCTCTACTTGGATTTGGGAGGCCTTTCAAAGGACAGTGATATCCTCTCCCTGGGAGTATCGTTGCACCGCTCGTGGTGGAAGGATAACGGGCTGAGATGTGGGAGCGAGGGCCTTGCCTCCGCTGGGTGGCAGAACCAGCAGAACCAGCAGAACCCCGAGCTGACCACAGTGCTGAGCTGCTGGCTAGAATACCAGTACATAGAAGTCCTGCACTGCATCGTCCAGCTGCTCATATCGCTCCCGGGATTTGTTTATGCCTGCTACGTCGTCAGCACTTTCTCAGATGAAGAAGACAGCTTTAATTTCTTTGGTGAATTCAGTCATCCATCCAAACCCTCTCAGTTGTTCTTCTAGTGTAAAGACCTGCGGATTATAAATAACCACACAAATAAAGTGGTTCAGGAAAGCCGAGAAGGAACCTAGCAGAAGGGAAGACAACTTTGAAGACTGTCATTGTGACATTGCTTCAGCCTGGTTCTCAAAAACTCCTGTCACAGATGCTGAACCTCACTGTGCACAAACTGTACACACTGTCCTGAGTCAAGAGGAGAATTTCACTGTATAAAACGTGCAGACCTATtcatgacatgttttttttctcaggccTAAAATGCTGTAAATCCAGATTTTAAtctacctctgtgtgtgtgtgtgtcagtgtgtgtcagtgtgtgtgaatgagataGAAACCAATAGATATCAAGCACTCAAGTACAAAAGAAAAGTGTGATTTGaaagatgtaaataagtcaCAGATTCTTTCTGgtgttttgtaaaatgtataaattATTAATGTGTCATTTTAGTTAGAAAAAGTGACCATGCAAACTTGTGTAGTGACTGATATAACTTAGCGAAATAAACCACACTCACAAAACAGCTTGTATTGCGGTGTTGCAcacatttctttattattaaacatttataagacttttttttaaga
>XM_039799385.1
ATACCGCCTCCCCTCCCCCTGCTCCGTAGTTCCCACTCAGGGACAGCCTACGTGTTTTCCTCAGGAGCTGAAGTGCGCTGTGCGTTTCCTCACACATCTGGAGAATATGGACCTAACGCTTGTGTTTGAGCATTAAAAAACACAATCGAGTTACTTCACTGCACTTTTccccatcatcttcatcatcttaATCAGAGCCAGCGggagcaggaaggagaggaagatgGGCTGCTGCTCGGCACGATGCATGTTGATCCTCCTGTGTTCTCTGCAGTTGATCACTGCGCTGGAGAGGCAGGTATTTGACTTCCTCGGCTACCAATGGGCTCCCATCATGATCAACTTCTTCCACGTCATCGTGGTCATCCTGGGCCTGTTTGGTGTCATCCAGTACAGGTCACGCTACGTCATTATGTACCTGCTGTGGATGCTGTTGTGGGTCGGCTGGAATGTCTTTGTTAGCTGTCTCTACTTGGATTTGGGAGGCCTTTCAAAGGACAGTGATATCCTCTCCCTGGGAGTATCGTTGCACCGCTCGTGGTGGAAGGATAACGGGCTGAGATGTGGGAGCGAGGGCCTTGCCTCCGCTGGGTGGCAGAACCAGCAGAACCAGCAGAACCCCGAGCTGACCACAGTGCTGAGCTGCTGGCTAGAATACCAGTACATAGAAGTCCTGCACTGCATCGTCCAGCTGCTCATATCGCTCCCGGGATTTGTTTATGCCTGCTACGTCGTCAGCACTTTCTCAGATGAAGAAGACAGCTATTATAAATAACCACACAAATAAAGTGGTTCAGGAAAGCCGAGAAGGAACCTAGCAGAAGGGAAGACAACTTTGAAGACTGTCATTGTGACATTGCTTCAGCCTGGTTCTCAAAAACTCCTGTCACAGATGCTGAACCTCACTGTGCACAAACTGTACACACTGTCCTGAGTCAAGAGGAGAATTTCACTGTATAAAACGTGCAGACCTATtcatgacatgttttttttctcaggccTAAAATGCTGTAAATCCAGATTTTAAtctacctctgtgtgtgtgtgtgtcagtgtgtgtcagtgtgtgtgaatgagataGAAACCAATAGATATCAAGCACTCAAGTACAAAAGAAAAGTGTGATTTGaaagatgtaaataagtcaCAGATTCTTTCTGgtgttttgtaaaatgtataaattATTAATGTGTCATTTTAGTTAGAAAAAGTGACCATGCAAACTTGTGTAGTGACTGATATAACTTAGCGAAATAAACCACACTCACAAAACAGCTTGTATTGCGGTGTTGCAcacatttctttattattaaacatttataagacttttttttaaga

Function

NR:

description
PREDICTED: sodium/potassium-transporting ATPase subunit beta-1-interacting protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799384.1 True 1409 mRNA 0.45 7 12271487 12280037
XM_039799385.1 False 1338 mRNA 0.46 6 12271487 12280037

Neighbor

gene id symbol gene type direction distance location
ythdf1 LOC104938233,LOC103354577,LOC106952594,LOC100697389,LOC102786472 coding downstream 956 12259997 ~ 12270531 (-)
dnajc5aa dnajc5,LOC104933326,LOC101169856,LOC107090698 coding downstream 33750 12233105 ~ 12237737 (-)
LOC120558333 NA coding downstream 41199 12224304 ~ 12230288 (-)
LOC120559362 LOC102786474,LOC103354471 coding downstream 152341 12103891 ~ 12119146 (-)
LOC120559249 ptpn1 coding downstream 272042 11986410 ~ 11999445 (-)
uckl1a LOC103355333,LOC101079427,LOC103139074,LOC101476695,LOC102196708,LOC102308715,LOC103385400,LOC101173865 coding upstream 26221 12306258 ~ 12323341 (-)
samd10a LOC105935172,LOC103139076,LOC103354595,LOC107095944 coding upstream 43448 12323485 ~ 12331992 (-)
mfsd2al2 LOC102788240,LOC103355362,LOC102198151 coding upstream 112218 12392255 ~ 12410148 (-)
fam110a NA coding upstream 132184 12412221 ~ 12415372 (-)
plp2 LOC106572444 coding upstream 159980 12440017 ~ 12449668 (-)
G49115 NA non-coding downstream 26654 12243202 ~ 12244833 (-)
G49118 NA non-coding downstream 57946 12211743 ~ 12213541 (-)
G49112 NA non-coding downstream 124454 12146728 ~ 12147033 (-)
G49092 NA non-coding downstream 130073 12140935 ~ 12141414 (-)
G49084 NA non-coding downstream 149937 12119658 ~ 12121550 (-)
LOC120558423 NA non-coding upstream 71390 12351427 ~ 12368708 (-)
G49178 NA non-coding upstream 91784 12371821 ~ 12373308 (-)
G49177 LOC108232018 non-coding upstream 95300 12375337 ~ 12375562 (-)
G49179 NA non-coding upstream 96251 12376288 ~ 12376976 (-)
G49180 NA non-coding upstream 96942 12376979 ~ 12380785 (-)
ppdpfa LOC104933328,LOC101073585 other downstream 48459 12220734 ~ 12223028 (-)
dnmt3ba NA other downstream 102278 12147414 ~ 12169209 (-)
G49083 LOC103354491,LOC102226477,LOC108232148 other downstream 143062 12126886 ~ 12128425 (-)
peds1 LOC104919928,LOC103354371 other downstream 292452 11959379 ~ 11979035 (-)
srxn1 srxn1 other downstream 380348 11885965 ~ 11891139 (-)
fkbp1aa LOC100692950,LOC107391264,LOC103354614,LOC101168621 other upstream 108944 12388981 ~ 12391677 (-)
prickle3 prickle3,LOC102790576 other upstream 135566 12415603 ~ 12439909 (-)
camta1a LOC103354943,LOC102299287,LOC102779653,LOC102211199,LOC106922242,LOC104961361,LOC107390471,LOC108232047,LOC103144055 other upstream 644421 12924458 ~ 13221338 (-)
LOC120558587 NA other upstream 970949 13250986 ~ 13253608 (-)
LOC120558437 NA other upstream 1028323 13308360 ~ 13312729 (-)

Expression


Co-expression Network