LOC120558430


Basic Information

Item Value
gene id LOC120558430
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 12685286 ~ 12697057 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799433.1
GACCCCatccagaaaaaaatattttctaccTGATGGTGTCTGCAGAGATATCTAGGCTATACTGATGATGTCTATACATCGATTTAAATGTGTCACATTTTAGTAAGACCGGCAATTGGCTGATATTAATTTAATATCCTATTTTCAGTGGTCGGCGTCTAGCCAGCCCGAACCAAACAGAACAAGGGGGAGTCGCAGGATTATACCAACTTAAAAGACACATTTGGGGCATGGAGGTCAGTGCTAAAATTAGAGGCTGCTCCTTCCGCGACAGTAGCCAAACTGCGATGCATAAAGTCATGTCAACCAGGGGATACACTATCACAAGAGCTGGCAGTATATAGGCATGTTTTCCATGGGTGACATTTAAACGCCACACGTTGACTAAAAAGAGCTTCTGTGCGTAACGCAGAGACAGCGCTGGATCTACACTGCTGCGCAAATAATGAGTATTTGGTAGTGCTTTTTTGGAGACGCCATATGTACTGCTCTCTTCGGCGCACAGCTTCCATGAGTGTACATTTCtgcaaaaatgtcttttttatcCATACCAAGTCAAGAGGGCACTTTTACCACGATTAAAAACGGCAAATCAGCCGAGCAGGCAGGGAGTAGGTCCCCCATGGACAACGAGGATCAtaatgatgacgatgatgaggAAGACGATGACAGCGAGGACGTCCGCCTCATCCCGAGATGCTCCCCGGTGCCCAGAAAGCGAGGCCACTCCATCCACGATGAGACTGCTGAGTATATGCAGATACAATTGGCGCTGTCTGACCGAAAGAGAGTGTCATTCGCCGATACAACAGGTGGGGATCTGGTGGATGTGAAGGAATTTGCTGCCCTTGATTCGGACGAGGAAGAGGATATTGCAAagtgggaggaagaggaggcaaaGTATCGGAAACCAGAGCGAGAACCGACCTATCATGTGCAGCCAGAGTTTACCGTGCCCAGCAGCAGTGCCCTGCTGCAGGCTGTGCACTCTAAAAAAGTGGAGGTTGAGCAGATGTCTCCAGCAGAGAACGAGCCACTTGCCTTCAGTGGGGTAATACGAGTCTTGAACATCTCCTTCCACAAAGCAGTTTATATTAGATCCACAATGGACAACTGGGCTACTTACTTTGATCACCCAGCAGAGTATGTCCAGGGATCTCATGATGGGTGCACTGATCAATTCTCCTTCAAGCTGTCTTTTGCACCCCCTTATATCACCCACGGCTCTCGCATTGAGTTTGTTGTCCGCTATGAGACCTCTGATGGTGATTACTGGGCTAATAACTCCTCTATGAATTATGTGGTAACTCTGCTCCTGTCATACGAAGATGATTTGGCTCAGACAAACGACATACAAGAAGTAAGAGGTATCCTGAAACCTCCAAAAGTTTACAGtATGAAAGATGATTTCGATTCAGAGGATGAGCAGGAAAAGGACAAAGCAGAAGAAGCAGGGACCTCGAGGTCCGGACCTACAGCTGTCTGCCCAGTCATCGTACAGCCGGAGATTGACATAGAGATTGCAGTTCACCAATCTGGTCCCTGTGTCCCACCCAACCACCAGCTTTCATCTGTTGATGGCAAACTGTCCGCTCGCACTGTATCCTCAGGCGAACAATTCCCTTGTATGTCTTCCGAAACCCCACTTCAAACCGCTTCATCCTTTGTACTCTGTACCAGCGAATCGGCCAAGCCAAATAAGTCACAGCCTTTACCCTTACTCCAGTGTGAATTAGGCAACCAAACGTCAGAGCAGCCCATAGACAGTAGTCCCTGTGCCCTGCTGCCTGCTTCAACTCCCTCTCTGCATCGAGAGTCAAGGCTGAGATCAGACAGCTCCCAGGCTGGCGGAGAGGAAATCCCTCCCTCCGACGCCTCATGCATGCAGCTTGCTACCATGGAGACAAATCTGTGGCCAACGACAGGAGAGGACGGATCGCCCGACAGCCCAGACAGTCGTCCTTGTCTTGAACGTCCCGCCGAGGGCGCCTGTGCTCCCGGTGTGACTCAGGGCTCCGAGCGAGAGGTTGCAGTGGGATCGAGTGAACTCGGTGCGGGATTATCAGAAGGTTGCACCAGGTCTGCAGCAGATCCTGAAGGCAGTACGCCTGCACTCGTGTCTCCTGTGGCTGAGGGTCAGGCATCTCTTGGAGCAGAAGGTGAAGCTCCACCGTCACCTGAACCCACAGAGAACGCGAGCCAAAACGTAGCTCGGTCTGCCTCAGCCTGGGAAGAGAAGGAAGACGTTCCCCAGATTCCCCCTGACTCGTTATTAAAGAATCTACCTAACACGCTGTCAGAGGTTTGCGAGCTGCAGTCGCAGCACGACGCAAACAGGATTCTGAAGCCATCCATCATCTTTCTGAGTGGAGTTGTCTCCCTCTCGATAGTGTTGCAGGAACCCAGTGCCCTCTTTATCATCGGACTACTTTTGGTCCTGCACCGTTTGTGATTACGCCACAAAAGTTCATTCTGATCTGTTCATTCTGGAGTGAAGTGCCTTTTCGTGATTCTAAAATATGCCAACAAGCTTAACAATACACAAATGAGTCTTCTGTTGAAGTTGTGTATCACTGTGTACGTTTTGagattagtttacattttcaggACAAGAAAGGGTACAATGTTTCCAAAGTCCAATGCAAGGAGAAAGTAATTACACAAATACTGGCGATATTTTCATGCATTCTGTGAAACAAGTGTGTAGTAGAATAGTAGTCCCCATTTCTACAACATTGTGATCCCTCTAATACTAGATCACAGTATATTGTCAGAGATGTTTTGAAAGTGGTCCGTAATTACTTTCTTCTTGTCATGTGGAGATAGTGTATGTGGTGTTATATTCTGATGTATTCAATCAGTGCTATTAtacacttgtttttttgttccatTGTTGTGAGTGTAGCTAAGGTTGTTGTCTAACCTCACTGCCATGAGTTTAACTTTTGTGAATTCTATGTGTTGTTATGGCTTTAAGAAAGattgctcagttggtagagcggcccatatatagaggtttactcctcgaatGCAGCGagcccgggttcgactctgacctgtggccctttgctgcatgtcattcccccctctctctctcccctttcatgtcttctgctgtcctatataaataaaggctgaaCATGgccaaaaaaagaatctttaaaaagaaaggaCAAAAACCATTACCATACTGAGACTTGTTATACAAATGGAATTGTGTTTACAAAATGCAAAAGCAAAACTTGCTGtttatgtgatttatttttgccccaatgcctaaaaaaaaaatgacctgCGGATGCTGCTTAAGGGACAAACGTGGAATACCGTCCAGTCATATTTACCATTAGAGAACACCAGCCTCCTCACTATTGCACACTGCATTTTGGTAAATCTTCCTGTTGATTCTTGCTAGTAAACCCATATTGCTGTTGTTGCACAACATGAAATACTACAGAACTACTTTGACACCCTCACAGACAGACTGAAGCACTGATTGACATGTTTGAAGTGATGAAAGTTTTTGCAGTGTATTGCCATTAAACGTGGTCCTTTATCCTGTACCAA
>XM_039799435.1
GACCCCatccagaaaaaaatattttctaccTGATGGTGTCTGCAGAGATATCTAGGCTATACTGATGATGTCTATACATCGATTTAAATGTGTCACATTTTAGTAAGACCGGCAATTGGCTGATATTAATTTAATATCCTATTTTCAGTGGTCGGCGTCTAGCCAGCCCGAACCAAACAGAACAAGGGGGAGTCGCAGGATTATACCAACTTAAAAGACACATTTGGGGCATGGAGGTCAGTGCTAAAATTAGAGGCTGCTCCTTCCGCGACAGTAGCCAAACTGCGATGCATAAAGTCATGTCAACCAGGGGATACACTATCACAAGAGCTGGCAGTATATAGGCATGTTTTCCATGGGTGACATTTAAACGCCACACGTTGACTAAAAAGAGCTTCTGTGCGTAACGCAGAGACAGCGCTGGATCTACACTGCTGCGCAAATAATGAGTATTTGGTAGTGCTTTTTTGGAGACGCCATATGTACTGCTCTCTTCGGCGCACAGCTTCCATGAGTGTACATTTCtgcaaaaatgtcttttttatcCATACCAAGTCAAGAGGGCACTTTTACCACGATTAAAAACGGCAAATCAGCCGAGCAGGCAGGGAGTAGGTCCCCCATGGACAACGAGGATCAtaatgatgacgatgatgaggAAGACGATGACAGCGAGGACGTCCGCCTCATCCCGAGATGCTCCCCGGTGCCCAGAAAGCGAGGCCACTCCATCCACGATGAGACTGCTGAGTATATGCAGATACAATTGGCGCTGTCTGACCGAAAGAGAGTGTCATTCGCCGATACAACAGGTGGGGATCTGGTGGATGTGAAGGAATTTGCTGCCCTTGATTCGGACGAGGAAGAGGATATTGCAAagtgggaggaagaggaggcaaaGTATCGGAAACCAGAGCGAGAACCGACCTATCATGTGCAGCCAGAGTTTACCGTGCCCAGCAGCAGTGCCCTGCTGCAGGCTGTGCACTCTAAAAAAGTGGAGGTTGAGCAGATGTCTCCAGCAGAGAACGAGCCACTTGCCTTCAGTGGGGTAATACGAGTCTTGAACATCTCCTTCCACAAAGCAGTTTATATTAGATCCACAATGGACAACTGGGCTACTTACTTTGATCACCCAGCAGAGTATGTCCAGGGATCTCATGATGGGTGCACTGATCAATTCTCCTTCAAGCTGTCTTTTGCACCCCCTTATATCACCCACGGCTCTCGCATTGAGTTTGTTGTCCGCTATGAGACCTCTGATGGTGATTACTGGGCTAATAACTCCTCTATGAATTATGTGGTAACTCTGCTCCTGTCATACGAAGATGATTTGGCTCAGACAAACGACATACAAGAAGTAAGAGGTATCCTGAAACCTCCAAAAGTTTACAGtATGAAAGATGATTTCGATTCAGAGGATGAGCAGGAAAAGGACAAAGAAGAAGCAGGGACCTCGAGGTCCGGACCTACAGCTGTCTGCCCAGTCATCGTACAGCCGGAGATTGACATAGAGATTGCAGTTCACCAATCTGGTCCCTGTGTCCCACCCAACCACCAGCTTTCATCTGTTGATGGCAAACTGTCCGCTCGCACTGTATCCTCAGGCGAACAATTCCCTTGTATGTCTTCCGAAACCCCACTTCAAACCGCTTCATCCTTTGTACTCTGTACCAGCGAATCGGCCAAGCCAAATAAGTCACAGCCTTTACCCTTACTCCAGTGTGAATTAGGCAACCAAACGTCAGAGCAGCCCATAGACAGTAGTCCCTGTGCCCTGCTGCCTGCTTCAACTCCCTCTCTGCATCGAGAGTCAAGGCTGAGATCAGACAGCTCCCAGGCTGGCGGAGAGGAAATCCCTCCCTCCGACGCCTCATGCATGCAGCTTGCTACCATGGAGACAAATCTGTGGCCAACGACAGGAGAGGACGGATCGCCCGACAGCCCAGACAGTCGTCCTTGTCTTGAACGTCCCGCCGAGGGCGCCTGTGCTCCCGGTGTGACTCAGGGCTCCGAGCGAGAGGTTGCAGTGGGATCGAGTGAACTCGGTGCGGGATTATCAGAAGGTTGCACCAGGTCTGCAGCAGATCCTGAAGGCAGTACGCCTGCACTCGTGTCTCCTGTGGCTGAGGGTCAGGCATCTCTTGGAGCAGAAGGTGAAGCTCCACCGTCACCTGAACCCACAGAGAACGCGAGCCAAAACGTAGCTCGGTCTGCCTCAGCCTGGGAAGAGAAGGAAGACGTTCCCCAGATTCCCCCTGACTCGTTATTAAAGAATCTACCTAACACGCTGTCAGAGGTTTGCGAGCTGCAGTCGCAGCACGACGCAAACAGGATTCTGAAGCCATCCATCATCTTTCTGAGTGGAGTTGTCTCCCTCTCGATAGTGTTGCAGGAACCCAGTGCCCTCTTTATCATCGGACTACTTTTGGTCCTGCACCGTTTGTGATTACGCCACAAAAGTTCATTCTGATCTGTTCATTCTGGAGTGAAGTGCCTTTTCGTGATTCTAAAATATGCCAACAAGCTTAACAATACACAAATGAGTCTTCTGTTGAAGTTGTGTATCACTGTGTACGTTTTGagattagtttacattttcaggACAAGAAAGGGTACAATGTTTCCAAAGTCCAATGCAAGGAGAAAGTAATTACACAAATACTGGCGATATTTTCATGCATTCTGTGAAACAAGTGTGTAGTAGAATAGTAGTCCCCATTTCTACAACATTGTGATCCCTCTAATACTAGATCACAGTATATTGTCAGAGATGTTTTGAAAGTGGTCCGTAATTACTTTCTTCTTGTCATGTGGAGATAGTGTATGTGGTGTTATATTCTGATGTATTCAATCAGTGCTATTAtacacttgtttttttgttccatTGTTGTGAGTGTAGCTAAGGTTGTTGTCTAACCTCACTGCCATGAGTTTAACTTTTGTGAATTCTATGTGTTGTTATGGCTTTAAGAAAGattgctcagttggtagagcggcccatatatagaggtttactcctcgaatGCAGCGagcccgggttcgactctgacctgtggccctttgctgcatgtcattcccccctctctctctcccctttcatgtcttctgctgtcctatataaataaaggctgaaCATGgccaaaaaaagaatctttaaaaagaaaggaCAAAAACCATTACCATACTGAGACTTGTTATACAAATGGAATTGTGTTTACAAAATGCAAAAGCAAAACTTGCTGtttatgtgatttatttttgccccaatgcctaaaaaaaaaatgacctgCGGATGCTGCTTAAGGGACAAACGTGGAATACCGTCCAGTCATATTTACCATTAGAGAACACCAGCCTCCTCACTATTGCACACTGCATTTTGGTAAATCTTCCTGTTGATTCTTGCTAGTAAACCCATATTGCTGTTGTTGCACAACATGAAATACTACAGAACTACTTTGACACCCTCACAGACAGACTGAAGCACTGATTGACATGTTTGAAGTGATGAAAGTTTTTGCAGTGTATTGCCATTAAACGTGGTCCTTTATCCTGTACCAA

Function

GO: NA

KEGG:

id description
K07189 PPP1R3; protein phosphatase 1 regulatory subunit 3A/B/C/D/E

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799433.1 True 3567 mRNA 0.47 4 12685286 12697057
XM_039799435.1 False 3564 mRNA 0.47 4 12685286 12697057

Neighbor

gene id symbol gene type direction distance location
LOC120558433 gpr173,LOC107086794,LOC102204197,LOC101466594,LOC108231911 coding downstream 5621 12674387 ~ 12679665 (-)
LOC120558830 LOC103354715,LOC100701974,LOC102202290,LOC102794242 coding downstream 49736 12614941 ~ 12635550 (-)
gpkow gpkow,LOC103467951 coding downstream 173714 12504401 ~ 12511572 (-)
timm17b timm17b,LOC102791711 coding downstream 185821 12494005 ~ 12499465 (-)
LOC120559913 cacna1f coding downstream 191519 12468700 ~ 12493767 (-)
wasb was coding upstream 24997 12722054 ~ 12728769 (-)
LOC120559801 slc38a5,LOC104951559 coding upstream 32335 12729392 ~ 12739824 (-)
apex2 apex2 coding upstream 43684 12740741 ~ 12744322 (-)
ccdc187 LOC103354907 coding upstream 199736 12896793 ~ 12915083 (-)
dhfr dhfr,LOC103371587 coding upstream 539159 13236216 ~ 13237110 (-)
LOC120558434 kdm5c,LOC101072313 non-coding downstream 24044 12604880 ~ 12661242 (-)
G49183 snph non-coding downstream 298062 12383502 ~ 12387224 (-)
G49180 NA non-coding downstream 304501 12376979 ~ 12380785 (-)
G49179 NA non-coding downstream 308310 12376288 ~ 12376976 (-)
G49177 LOC108232018 non-coding downstream 309724 12375337 ~ 12375562 (-)
G49307 NA non-coding upstream 3372 12700429 ~ 12704105 (-)
G49372 NA non-coding upstream 71763 12768820 ~ 12771419 (-)
G49374 nt5dc2,LOC102799881 non-coding upstream 78860 12775917 ~ 12779320 (-)
G49384 NA non-coding upstream 140463 12837520 ~ 12839132 (-)
G49407 NA non-coding upstream 223944 12921001 ~ 12924328 (-)
prickle3 prickle3,LOC102790576 other downstream 245377 12415603 ~ 12439909 (-)
fkbp1aa LOC100692950,LOC107391264,LOC103354614,LOC101168621 other downstream 293609 12388981 ~ 12391677 (-)
ppdpfa LOC104933328,LOC101073585 other downstream 462258 12220734 ~ 12223028 (-)
dnmt3ba NA other downstream 516077 12147414 ~ 12169209 (-)
G49083 LOC103354491,LOC102226477,LOC108232148 other downstream 556861 12126886 ~ 12128425 (-)
camta1a LOC103354943,LOC102299287,LOC102779653,LOC102211199,LOC106922242,LOC104961361,LOC107390471,LOC108232047,LOC103144055 other upstream 227401 12924458 ~ 13221338 (-)
LOC120558587 NA other upstream 553929 13250986 ~ 13253608 (-)
LOC120558437 NA other upstream 611303 13308360 ~ 13312729 (-)
LOC120558461 NA other upstream 709728 13406785 ~ 13413178 (-)
zgc:66479 NA other upstream 1050346 13747403 ~ 13753866 (-)

Expression


Co-expression Network