ncoa6 (ncoa6)


Basic Information

Item Value
gene id ncoa6
gene name ncoa6
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 18686773 ~ 18700011 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799508.1
CGGAAATAGTATTTTTCGCTACCTTGACATCGTTTCTGATTTGCTTGTGGTTCATGTTTTGTTAGCTAATCTGGCTAGCAGATGTCGACTGGTCGAATTTATTTTCAGATGAATATATGTGCATAAAACTGTTGAAACGCCACTCCTAGTAAGAGGGGAGGATGGCGCATCGACGTACCCCACCTCCGCTGTCCCAGAGGACTGAGTACCTGGAACCTGATAATGATTCCGACAGGGACTCTGGTGTTGGGGAGGATGATGACAGTTGCCATGGAGGCACAGTAACCGAAGAGGAGAAAGACAACACGCAAGATGGCACGGAAGAAAACTGCGAGGAGGGAGacgattttacagtttttgttgcctttcaAGGGAATATGGAGGACGAGGACTTCATTCAAAAACTTGACACTATCCTCAGTGGGATACCAAACATGCTTGATATGGGCTCGGAGAGGCTACGGCCACAGCATGTGGAGCCGTGGAACAGCGTGCGTGTTACCTTCAACATTCCTCGGGATGCTGCTGAGCGACTCAGACTGTTGGCCCAGAACAaccagcagcagctcagagacCTGGGGATTCTCTCAGTGCAGATAGAAGGGGAAGGGTCCATCAATGTGGCTGTGGGACCAAATAGAGTACAAGAAGTCAGAGTGAATGGACCAATTGGAGCACCTGGCCAGATGAGAATGGATGTTGGCTTTCCAGGTCAGCCTGGTCCAGGGGTTAGGATGGCTAATCCAACAATGGTTCCCACTGGGCCTGGCATTGGAGGTCAGGCTATGGTACCAGGCAGCAGTGGACAGATGCATCCTCGTGTTCCGAGACCATCTTCACAGACAGGTTCAGATGTTATGGATCCAATGATGCCAGGCATGTCAgttcagcagcaacagcaacttCACCACCAACAGGCCGGTCCCCATGTCTCAGGCCCAATGCCTCCTCAGGCTGCCCATCACATGCAGGGTGGGAGACCACTCAACCCTGTTGCACTGCAGCAGCTTCAACAACAACATCaccaacagcaacaacagcaacaggcCCAGCAGCAAGCTCAGCTCTCCCAGCTTGGACCTAGACCTCCATTCAACCCATCGGGCCAGATGGCTGTGCCTCCTGGCTGGAACCAGTTGCCCTCTGGGGTCCTCCAGCCACCAGCTGCCCAAGGAGGCCCTGCTTGGCGAAAGCCCCCACCCCAAGCCCAAATGGTTCAACGTCCACCCTCCCTTGCTACAGTTCAAACTCCCAGCCACCCTCCACCCCCTTACCCATTTGGCAGCCAGCAGGCTGGGCAGGTATTCAATGCCATGGGACAGGGAcaattacaacaacaacagcagcagacagGAGTTGGCCAGTTTGCCGCCCCCCAGCCTAAAGGCCCACAGGCTGGCCCTGGTGGTGTTGCAGGACCACCCAGACCCCCTCCACCACTTCCACCAACTTCTGGACCGCAGGGCAACCTCACTGCCAAGTCCCCGGGTTCCTCCTCGTCTCCTTTTCAGCAGGGTTCACCTGGGACTCCTCCCATGATGGCTCAGAGACCTACAACTCCACAGGGTTTTCCCCAGGGCGTTGGATCACCAGGAAGAGTAGCCCTCGGCCAACAGGGTAACATGCAACAAGGATTCATGGGAATGCCCCAGCATGGACAGCCTGGGGCCCAAGTTCACCCAGGCATGCAAAAGCGTCCCATGGGCTTTCCAAACCCAAACTTTGTCCAAGGTCAGGTGAGTGCCAGCACTGCAGGAACCCCTGGCGGAGGAGCCAGTCAGCAGCTACAGAGCAGCCAAGCAATGACTCACACAGGAGCTCCGCCTTCAGCCTCCACACCAAACTCAATGCAGGGTCCACCCCATGCCCAACCCAATGTTATGGGTGTACAAAGTAGCATGGCAGGTCTGCCCCCTGGTACAACCGCTGGGCCTATTATGGGCCAGCAACAGCCTGGCCTCCAGACCCAGATGATGGGCCTCCAGCATCAGGTCCAGCCCGTGTCTTCCTCCCCCAGCCAGAAGGTTCAAGGCCAGGGTGGAGGTCAGACTGTCCTTTCAAGGCCCCTCAGTCAAGGGCAGAGAGGAGGGATGACCCCACCCAAGCAAATGATGCCTCAGCAAGGCCAGGGGGTGATGCATGGGCAGGGTCAGATGGTTGGAGGCCAAGGGCACCAGGCCATGCTcctacagcagcaacaacaacagcaacaacaacagcaacaacaacagcaacaacagcaacaaaactCCATGATGGAACAAATGGTTGCCAATCAGATGCAAGGCAACAAGCAGGCATTTGGAGGCAAGATTCCAGCTGGGGTTATGCCTGGCCAGATGATTCGTGGCGCTGCTCCAAACGTTCCAGGTAACATGGCTCAGTTCCAGGGCCAGGTTGTACCACAGCAGATGActccacaacagcagcagcaaatgGCTCAACTCCAACAACAGCaattacagcagcagcaacagcaccagttgcagcagctacagcagcagcagcagcagcaacaacaacaacaacaacaacaccagcaGATGAACCAGCAACAACCCCAGGTTCCTATTGCTGGTAATCCTAATCAAGCTATGGGCATGCATGGGCAACAGATGAGGCTCCCTGCAGGTCATCCTCTTATCCAACAACAGTTGCAACAGCAGCagttacagcagcagcagcagcagcagaaacaacagcaacagGCCATGTTGCAACAGCAGGCAGCTCAACAACACCCACATCCTTTGGGAGATCCTAATAGTGGGACAGGGGACTTGGGGGTCCAACAGATGGTCCCTGATATGCAGGCACAGCAGCAGCAAGGCATGATGGGGGGCCCTCAGCACATGCAGATGGGAAATGGCCACTTTGCAGGACATGGCATGAACTTTAACCCACAGTTCCCAGGTCAGATGCCAATGGGGGGACCCTGTGTACAGCCAGGAGGCTTTCCCGTCAACAAGGATGTAACCCTGACTAGCCCACTGCTTGTCAACCTGCTGCAGAGTGATATCTCAGCCAGCCAGTTTGGGCCAGGAGGAAAACAGGGAGCAGGGGGGGGCAATCAGGCCAAACCCAAAAAGAAGAAACCAGCACGAAAGAAGAAGCCcaaagagggagagggacaaCAGCAAGTAGAGGGACTTGGTGGTCTTGATGTGGCTGCTGGCATGGAGGATTCCGAACTACCAAATCTGGGTGGTGAACAGAGTTTGGGTTTAGATAACTCTGGCCAGAAACTCCCTGATTTTGCCAACAGGCCTGCGGGCTTTCCTGGCCAACCTGCAGACCAGAGAGTATTGCAGCAGGTACCCATGCAGTTtatgcagcaacagcagcagcagcagcagcagcagcagcagcaacaacagcagcagcagcaacaacaacaacaacaacaacaacaacaacaacaacaaatgcagCACATGCAACAGCAGCagatacagcaacaacaaatgcagcagcagcaacaaatacaacaacaaaTGCAACAGCAGCAAatacagcaacagcagcaacaattacaacaacaacaacaacaacagcagatgcagcaacaacagcagatgCAACAGATGCAGCAGATGCAGGGTCTCCAGAATGCTCAAGGGCAACAGGGGATGACGGGGCCACAGACTTCGGGTCAAGGCCAGCCCCAGATGCACCCTCATCAGCTACAGCAACAGCAAACTCAACAACCACACCTGCAACAgcagcaacaacaacagcagatgatgatgatgctgaagATGCAGCAAGAGCAGGCAAAGAATCGCATGTCCATCCCCCCAGGAGGGCAGCTCACTCCTAGGGGCATGGGCAATCCACCTGAGGTGCAGAGGCTCCCAGTCTCACAGCAAGGCAACATGCCTGTAATGATCAGCCTTCAAGGACATGGAGGGGTACCGCTGTCACCTGACAAAGCCAGAGGGATGCCCCTGATGGTgaacccacagCTTGCAGGTGCTGCACGAAGAATGTCCCATCCTGATGCAGGTCCTCAAGGCACTGGAACTGAAGAGGCTATTGCAGGGTCGCACCCGAAGCAGGACAGGCCTGGTGGCCCCGAAATTGGGTTGCAGCCTGGGAATGGAACCCAACAGATGATGGCCAATCAGGGCTCCAACGCTCACATGATGAAGCAAGGCCCTGGTCCATCAACAATGGCCCAGCATACTGGAGCCAGTCCCCAGCAACAATTACCAAGTCAGCCTCAGCCAGGAGGCCCCATGCCTGGCCTTCATTTCCCCAATGTCCCCACAACCTCACAGAGCTCCAGGCCAAAAACCCCCAACAGAGCCAGCCCCAGGCCATACCACCATCCTCTCACCCCAACTAATCGTCCACCCAGTACTGAGCCCTCCGAAATCAACCTTTCACCTGAGAGGCTAAATGCCTCTATTGCAGGGCTGTTTCCTCCCAAAATCAACATTCCTCTGCCTCCCAGGCAGCCTAACCTAAACAGGGGATTTGATCAGCAAGGTCTTAACCCAACAACTCTGAAAGCAATTGGACAGGCCCCTCCTAGCTTAACTTTACCAGGGAACAACAACAATGGCACTGTGGGTGGAAATAACACTAATAACAGTCAGCAGCCTTTCTCTACTGGCACTGGAGTAGGAGGCACTGGCACTAAACAGGACAGGCAGACTGGAGGGCAGGGAAAGAGGGCAAGTCCTAGTAATAGTCGGAGGTCAAGTCCAGCCTCTAGCCGTAAGTCAGCCACCCCAAGTCCAGGGAGACAAAAGGGGACAAAGATGTCCATCAACTGCCCTCccccccagcagcagcagttggtCAACCCTCAGGGGCAAACCATGATGCTAAGCCCTACCTCAGTACCCCCAAGTCCAGTATCTATGCCTTCACAAGTGAGTGGGGCCATGGAGACACCGCAGACCCAGAGCCCCTTCCATGGGATGCAAGGTAACCCTGCTGAGGGAGCCAGGGAAAGTCAGGGAATGATGACCGCAGAGCAGCGACAGATGCCCCAGCCACAGTCTTTGAGGGAGTTATCAGCTCCCAGAATGGCAAGTCCTCGTTTCCCAATGCCTCAGCATCCTAAACCTGACTTGGAACTGCAGGCTGGTACAGTTGAGAGGCACCCAGCACACACAGCATCTATGCAGGACTCTGAGGTCTCACCTACTCTCAGGTCAGCTCCAACCTCCCTCAACCAGCTACTGGATAACTCTGGTATCCCAAACATGCCTCTTCGGCCCATACAGAGTAATACTGGTAGGGATGTTATGGGGAAGGACAGCCCTAAGTCTGCTTTGGATCTAGAGAGACCACTCCACAGTAATTCCCAGAGTACAGATACGTCAGCTGCTGTCACTTCCACTGCCACTATAAATGAGTCGGAAGCTAAACCCATACCTGCTGTAAAAATCCCTACCAGCAGTCCTAATTTGCAGCCTGCTTCAATTTCCAGCTCGCAGTCTAGCCCTAACAGGACCTCTAATACTACCCCCAGCCTTAGCCAAAACCCCATCTCCAATCTTGGTGTCAATCCCAGTCCAAATATAAACCCAACACCTACCCTCTGCCCCACTCTCAGTACTAACACTAATGCAACCACAAGTGTAATCCCCAACCCAGTCACTTCCGGTCAGAGCAGTCCTGCCTCGACTGTTAGTACCAGTTCAAACTCCAGCTCTGCTTTAAACCCAGCCAGCTCAGCTCTAAACTCAGCCAGTTCAGCTCTAAAACCAAGCCCTAGTCCTAAACCTGTGACAAGTGTTAACTCAGTCATACAGATCCCTGCCTCTTCTAGCACAATTTCCCCCAGCCAGATAACTGTGTTTGTCACCTCTAACCCGATCACCTCCACCTCTGCCCCCACTCCCCAGGCACCCACATCCATGGTCTCCACCATGGTGGCTGTCCCTAACAAGAACATTAGACCTCAGGACATCCAGCAGCAGGCCCCTGTCCCCCGACCTCCTCAGTTTATCACCACCACCCCTGTATTTATCAACCCAATTTTCCAGGTCCCAGGTGCATCTGTGGCTCCCAATACCACAATGGTATCACAGTCAGTCACCATGGTGGGGCCTATCCAAGTGTCCACTACAAACCTCCAACTTTCTTCTGCCCCAAGCTCTACCCAGTCCTCATTGTCTAACATGACCAGCACTCAGTCTACCAGAAGTGCTGTTGGACAGGTCCAGATTGCCACTAGTGTGTCCTCATCAGTCCCGGTTGGTACTCCCCCAGTTCCCAAGCAAATGAACCCAGGGGCTCCCAAAACTGAAAATCTAGGTGAGGCAGGTTTTGCTCAGAAACCTATTCCTCCAGTCCGGCAGCCATCTCCCCATCCAACCCCTTCAGCAACATCTCCCTTTCAGCCACCCCtggcttctcctcctctctgctctaGTCCTGGGGCTGCTAACACTATTCGAAAGAGCCCCATGTCGCCATCTCCCACTGCCCAGCTGAAAAGTAAACCTGGACAGGCTGCTGTAGCTATTTCTGGTACAGCGGACTCCCAGCAGAGTCCTGTAGAAAGGTCTGCGCAGGGGCCCTCCGGAGCTGTGCCACCACAGAGCTTTCATCCTCCTGCTAGTCCTGCCATTCAGATTGAGACACTAGCTCCTCaaactactactgctgctactccAAACACTCCACCTGCTGTCTCCTCTCCAATCCCAGTTCCTGGCCAAGTGGCTGTTCCTACTCAGATTGTTACCCAGGCTCCAGTGCCTGCACCAGCTTCACTCTCAAGCCAGGCTGTAACTTCTCAAGCTCCTATTGTCACTGTAGTTGGTGCTACCACAGGTGTCTCTTCTGCTACCCTCTCTACGGTTGCTCCCGTACAAAGTCCCGTACCGTCCGTTGTTCCTGGATCTGGAGCTGCTCTGAAGGTTGCCCCTACCACATCCTCTCCAGTTGCTAACCCCAGAGTGTCACCAGCTCAGCCTGACCCTCCAGCTACAGAGCCCCCCATGTTGCCAGCTGCTGTATCTGCTGAAACCACTCAGACCACCCCAGCACCTATTCAACAAGATGTCCCACAGGCCCAGGAACCTGTTGCCAGTGAGAAGATGGGTGAAGAGGTCTTGACAGGTTCTGAGCAGGGATgggcaaagaaaagaaagacgCCCATCAACTTAGTCCCAAGGGCTGCTGTGGAGAAGCCCAAGGGACCGAGCAGACGCAGCTCCCGGGCAGAgaaggaggtggaggaagagcCAGTAGCAGACAGCGGCATTAGGAAGAGATCAGCCAGGCCTGGCACCAGTGCTGCTGTAAAAGAAACTGGAGCAAGCCCCACCCAGGCCAAACGAAGGAAGTCGAAATAGGCACAACTCCAGTTGTGGCAACCTATGAactgtactgtaaatgttttttgtttcctGCTGTGAATCAGTTGATATTGGTTTCTCTGTCCCAGATTATGAATTTTCAATGGAGGAAGAAACCATGTACAGATTGTTTTAAAAAGAATTATGCTATTGTTTTGTCAATGCTATTATGTGAGATTGTAGTTAGAATGTGTGCAATAGCGTATGTGTTTGTGGGAATGTGCTTTTTATATTAAATGCTGGATTAATCGTGAAGACTGATAATGGAGTTTGCCATGATTGTATAATTATGTTGTAAAACTGAATTAAATTTTCTACTGCTTTTTGTTCTGTGAAA

Function

symbol description
ncoa6 Predicted to enable nuclear receptor coactivator activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of histone methyltransferase complex and transcription regulator complex. Human ortholog(s) of this gene implicated in breast cancer; colon cancer; and lung cancer. Orthologous to human NCOA6 (nuclear receptor coactivator 6).

NR:

description
PREDICTED: nuclear receptor coactivator 6

GO: NA

KEGG:

id description
K14971 NCOA6, ASC2; nuclear receptor coactivator 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799508.1 True 7659 mRNA 0.53 17 18686773 18700011

Neighbor

gene id symbol gene type direction distance location
top1 LOC103366028 coding downstream 351 18670674 ~ 18686422 (-)
plcg1 plcg1 coding downstream 18024 18636575 ~ 18668749 (-)
rab5if c10h20orf24,LOC104925093,LOC102790476,LOC103366025,LOC101470883 coding downstream 68011 18613329 ~ 18618762 (-)
dhx35 dhx35,LOC102790768 coding downstream 75173 18603644 ~ 18611600 (-)
spata2 spata2 coding downstream 346182 18335401 ~ 18340591 (-)
LOC120558485 ggt7 coding upstream 314 18700325 ~ 18711876 (-)
LOC120558486 tp53inp2 coding upstream 13615 18713626 ~ 18723209 (-)
samhd1 samhd1 coding upstream 75739 18775750 ~ 18787283 (-)
LOC120559673 LOC104946588,LOC103370859 coding upstream 101936 18801947 ~ 18817830 (-)
LOC120559674 LOC103370862 coding upstream 118831 18818842 ~ 18826772 (-)
G50991 NA non-coding downstream 51538 18634465 ~ 18635235 (-)
G50945 NA non-coding downstream 181757 18504469 ~ 18505016 (-)
G50941 NA non-coding downstream 211061 18474909 ~ 18475712 (-)
G50932 NA non-coding downstream 318403 18368027 ~ 18368370 (-)
G50915 NA non-coding downstream 367168 18319313 ~ 18319605 (-)
G51064 NA non-coding upstream 12664 18712675 ~ 18713213 (-)
G51068 sna2 non-coding upstream 38472 18738483 ~ 18740343 (-)
G51069 NA non-coding upstream 58031 18758042 ~ 18758501 (-)
G51088 NA non-coding upstream 222852 18922863 ~ 18928835 (-)
G51122 apeh,LOC103467450 non-coding upstream 527310 19227321 ~ 19227905 (-)
samd10b samd10,LOC107570869 other downstream 585201 17974293 ~ 18101572 (-)
zbtb46 zbtb46,LOC102795869 other downstream 791691 17835080 ~ 17895082 (-)
G50712 birc7 other downstream 997013 17688115 ~ 17689760 (-)
LOC120559328 smim4 other downstream 1571726 17106834 ~ 17115047 (-)
G50217 fgd3,LOC104966710 other downstream 2402917 16281044 ~ 16283856 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other upstream 174744 18874755 ~ 18886895 (-)
kcnd3 kcnd3,LOC102776651,LOC102303593,LOC100697611,LOC101470631 other upstream 245957 18945968 ~ 19077781 (-)
LOC120558911 LOC103362803,LOC100693258 other upstream 1099194 19799205 ~ 19815318 (-)
LOC120558386 hoxc10,LOC100690382 other upstream 2120160 20820171 ~ 20952518 (-)
fmnl3 fmnl3 other upstream 2467893 21167904 ~ 21199043 (-)

Expression


Co-expression Network