LOC120558517 (slc26a9)


Basic Information

Item Value
gene id LOC120558517
gene name slc26a9
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 11337607 ~ 11348247 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799550.1
AGCACCCTAACAAACCAACAATTTAAGCGATTCAACTGTCCCAGCAAGGCTGTACGTGCTAAAGCCTTTTAGTTTCTAGGCTCCACCCACAAGGTGTAGAGGGTCTTTAGCATAGCTTGATAAGGAATCAAACAAGTGggcaatacacacatacacctgaGCCACATGCCTGCAGACGTTGCACTTCAACAATAAGCCATGCACCGGGATCGCCCACGTTATGTGATTGACAGGCCGGCATATAACCTCACAGACTTTGACAGAGAGTTTGACAAGAAGAGTCGACAATTCCCCGTTGGAGAGAAAGTGAAGAAACTCTTCAGATGCTCTGTGCTGAGACTCAAGGGCTTGTTATTCAGACATCTGCCTGTACTGAGCTGGCTGCCCAAGTACAAAGTGAAAGACAACCTGCTTTGTGATGTCATCAGCGGGGTCAGCGCCGGCACCATTCAAGTTCCCCAGGGCATGGCATTTGCCCTCCTGGCAAGCCTCCCTCCTGTCAATGGTCTCTactcctctttcttccctctcatCCCGTATTTCTTCATGGGCACTGCTCACCAGATGGTCCCAGGTACGTTTGCTGTCCTCAGCATTATGGTGGGAATCGTATGTCTTAGGCTGGCGCCAGAGTCAGACTTCAGTCATTTCAATGCCACACTTAATTCTACAATAGTGGACACAGACCGGATGAATGAGGTTCGTCTGGGAATATCTGGAACCCTGGCCTGTCTCACTGCGATCATACAGATTGGCCTTGGCTTCATGCAGTTTGGGTTTGTAGCCATCTATCTGTCGGAGTCCTTCGTCAGGGGCTTCATGACTGCTGCAGGACTGCAGATCCTCATCTCAGTGCTCAAGTACATCTTTGGCATCCAAGTGCCACCTTATAGTGGTCCGCTGGCCGTTATATATACTCTGGTAGATATTATATGTGGCCTCCCTGATACCAACATAGCGTCGTTGGTATTTGCTCTGGTCAGCAGCATAGTTCTGATTGTAGCGAAGGAGCTGAGTGCACGCTACCGCCACAAGCTGCCCTTTCCCATTCCTATGGAGATCATAATTGTGGTGGTGGCCACAGCCATCTCAGGCCCTCTGCATCTTCCTGAGATCTACCACATGGACATAGTGGGAGAAATTCCTTTGGGATTCCCAGCCCCCATCCTGCCAACAGTGAATCAGTGGGAAGACATGTTGAGCACAGCTTTCTCCCTGGCAATCGTGGGGTATGTCATTAACCTGGCAATGGGCAGGACACTGGCAGCCAAGCATGGCTACGACGTGGATCCCAATCAGGAAATGTTGGCTCTTGGCTGCAGCAATTTCCTCGGGTCCTTCTTTAAGATCCATGTGATCTGCTGTGCCCTGTCGGTGACCCTGGCGGTGGACAATGCTGGTGGAACATCACAGTTTGCCAGTCTATGTGTGATGCTGGTTGTTATGGTTACCATGCTGGCATTGGGAGCCTTCCTGAAACCACTTCCAAAATCTGTGCTTGGAGCCTTGATTGCAGTCAACCTGAAGAACACGCTCCTACAGCTCTCTGATCCCTATTACTTATGGAAGAAGAGCAAATTGGACTGTtgtgtgtgggttgtgtcaTTCTTGGCCACATTCTTTCTCAGCTTGCCTTATGGAGTTGCTATCGGAGTGGGCTTTTCCATCCTGGTAGTGATCTTCAAGACACAGTTTCGCAATGGTTCGGCAATGGTTCAAATTATGGATACAGATATCTACAAAAATCCAAAGGTGTACAGTAAGGTCGTGTCAATAACAGGTGTGAAAATAGTGAACTATTGCTCACCACTCTATTTTGCAAACGCTGAAATATTTCGCCAGAGAGTCATCAAAAAGACCGGGCTGGACCCTGGTAAACTTATCCTGGCCAGACGGAAGTTCttagagaaagaacagaaacaaaaaacgaaAGAAGAGAACAAGGAGAATGAGACAAGGAGGAGGAAACCCAGCTCTTTGGCAAACATGAAGACCATATCTCAGCTTGAACTGCAAATAGACTTTGAGATGAACGATGGCAGTGCCAGCAAACCTGAACCTCCCACCAGCTATGTCAACTTCCACTGTAGTGACATTGAGCCGGGCGAGCAGGCACCTGACCAAGAGCCACCCAGCCCCACACTGGTGTCCCAGCCCATGCCCTTCCACACCCTCATCCTCGACTTGGCAGGGGTCTGCTTCATAGACCTAATGGGCATCAAAGTATTGATAAAGATGAACTCAAGCTACACAATGCTGGGCATTAAGTTGTACCTGGCTAATGTTCAAGCCCCGGTGTATGAAGAACTGGAGGTTGGAGGAGCTTTTGATGACGGCAATATTGCCCGCAGtaatctctttctttctgtccacGATGCCATTGTGTTTGCTCAGCAGACCACTGGAGAGAGGCGAGTCTCCCCAACGGCAGAGAGAGCAAGACAGGAACTTGCCTTTAACATTAATGAGAAGAAGGATCTGGAGCAGGAAATGTTTTGAGCACTGATCGCTGCAGTGAAGACAAGCGGGAGAAACATGACGAAGATACTAACCGTAAACTTTCAATGTCACTGTAATTTATGGAAATGTATTGTTGCCAAAAATACTTTCTGTGCTTGATCTCATATCTCT

Function

symbol description
slc26a9 Enables ATPase binding activity; anion:anion antiporter activity; and chloride channel activity. Involved in bicarbonate transport; chloride transport; and positive regulation of gene expression. Located in apical plasma membrane and cell surface.

NR:

description
PREDICTED: solute carrier family 26 member 9

GO: NA

KEGG:

id description
K14706 SLC26A9; solute carrier family 26 (sulfate anion transporter), member 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799550.1 True 2631 mRNA 0.48 21 11337607 11348247

Neighbor

gene id symbol gene type direction distance location
plxna2 LOC101478991,LOC100710907,LOC102296543 coding downstream 208297 10909818 ~ 11129310 (-)
si:dkey-261h17.1 LOC100710642 coding downstream 430681 10867858 ~ 10906926 (-)
ptpn22 LOC106912495,LOC103467961 coding downstream 771132 10542933 ~ 10566475 (-)
si:ch73-206d17.1 NA coding downstream 1012396 10316819 ~ 10325211 (-)
LOC120558781 LOC105013598,LOC108237630,LOC101472165,LOC107390417,LOC101079871 coding downstream 1201226 10131691 ~ 10136381 (-)
slc48a1a slc48a1,LOC101074998 coding upstream 39 11348286 ~ 11360195 (-)
itga5 LOC103365860,LOC103385260 coding upstream 33935 11382182 ~ 11421461 (-)
csrnp2 csrnp2,LOC102795091 coding upstream 107496 11455743 ~ 11464126 (-)
tfcp2 tfcp2 coding upstream 116251 11464498 ~ 11477916 (-)
pou6f1 pou6f1,LOC102796073 coding upstream 138818 11487065 ~ 11498064 (-)
G48761 NA non-coding downstream 116128 11220997 ~ 11221479 (-)
G48756 NA non-coding downstream 128990 11208394 ~ 11208617 (-)
G48749 NA non-coding downstream 188225 11149074 ~ 11149382 (-)
LOC120558410 NA non-coding downstream 472562 10834886 ~ 10865045 (-)
G48705 NA non-coding downstream 549717 10668960 ~ 10787890 (-)
G48891 NA non-coding upstream 90025 11438272 ~ 11438701 (-)
G48903 LOC102783589,LOC107599367 non-coding upstream 215824 11564071 ~ 11572989 (-)
G48886 cs non-coding upstream 228292 11576539 ~ 11578988 (-)
G48907 ankrd52 non-coding upstream 252045 11600292 ~ 11600508 (-)
G48910 ankrd52 non-coding upstream 257486 11605733 ~ 11606614 (-)
G48697 NA other downstream 603720 10641405 ~ 10733887 (-)
G48523 NA other downstream 1311782 10024994 ~ 10025825 (-)
hipk1a LOC103359735 other downstream 1552366 9766311 ~ 9785241 (-)
c1qtnf12 fam132a other downstream 1583921 9727874 ~ 9753686 (-)
olfml3a LOC103359736,LOC104967461,LOC102308353,LOC101465779,LOC102785892 other downstream 1613473 9689729 ~ 9724134 (-)
LOC120558961 NA other upstream 155580 11503827 ~ 11508337 (-)
srxn1 srxn1 other upstream 537718 11885965 ~ 11891139 (-)
peds1 LOC104919928,LOC103354371 other upstream 611132 11959379 ~ 11979035 (-)
G49083 LOC103354491,LOC102226477,LOC108232148 other upstream 778639 12126886 ~ 12128425 (-)
dnmt3ba NA other upstream 799167 12147414 ~ 12169209 (-)

Expression


Co-expression Network