LOC120558533


Basic Information

Item Value
gene id LOC120558533
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 2762276 ~ 2764876 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799570.1
ATGAAGGAGATAGTGCCCAAATACAACTTCAGTGTTATGATCGATAACTACTACTGTGGTTCTGCTGATGGCTTGGCCTGTCCTCAGTCCATCACTGTCTTCTACAAAAGCTACACAATCTTTATAATGCAGAAGGAGGTCAATGGCATTTACACAAATCAGACCACTGTGAATGGCAAGCATGTGAGTCCTGCATACCAAAATGGTGACTTCCGTATAACCTCCACCGGTATAGAGACTGTGCTTGTCATCCCTGAAATCCATGCCAAGATCACCTTCTCAGGGCTCATATTCAGTATCTACCTGCCCTATAGTAAATTTGCCGGCAACACCGAGGGACAGTGTGGCACATGTAACAACAACCGGACAGATGACTGCATGTTGCCAAGTGGCAAAATTGATCCTTCATGTCCTAATATGGCACTTGGGTGGCATGCTAACGACAGTTACTGTGAACATATTAACCCCACACCTACGCCTACGACTACACCTATGCCTACGACTACACCTACGCCTATGCCTATGTCTACGCCTACACATAACACTTGCGATACATCCATCTGTGAGATCATCAAGGGCAGTGTGTTTGAAGCTTGCCACAAGGTTATTGACTACACTCCATTTGTTGTGGCCTGTGAGTTTGACATTTGCCACATGCACATAAATCACATTGGCTGCACCAGCTTACAAACCTATGCTGATGCCTGTGCTGAGTCTGGACTGTGTATTGACTGGAGAAGTGCCACCGACGGACTCTGTGAATATACATGTCCAAGTCCCAAAGTCTATCGGGGGTGTGGCCCTCAGGTGGAGCCTACCTGTGATTCCTGGTACAACCAGAAATTCATCTATACGGTCAATGAGTTCAGTGCCATGACAAATGTGAAGCTGGAGGGTTGCTTCTGCCCAGATGAccacttcctcctctcttccagTTCTAATGAATGTGTGCCCACCTGTGGTAAGAGCAGATGGCACTACTATATGGCAACAGCTATGGACAACAATGTTCTGCACTTTTTAATAGCCTTTTGTGACTATGTAAAAATcctatttgttattttatcatcaaaCTTATTTTTACCTTAATGTTTTACCATAACTTTGCCATAATGTAGCTGATTGTAGAATGATTCAAGAAACATTCCAAAATGTCACAATTTAATCCACTGTTTTGCAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799570.1 True 1182 mRNA 0.44 6 2762276 2764876

Neighbor

gene id symbol gene type direction distance location
LOC120559403 NA coding downstream 1121 2757509 ~ 2761155 (-)
LOC120559408 NA coding downstream 35382 2719103 ~ 2726894 (-)
LOC120558522 NA coding downstream 133074 2627722 ~ 2629202 (-)
LOC120559399 NA coding downstream 144676 2616360 ~ 2617600 (-)
LOC120558520 NA coding downstream 191302 2568810 ~ 2570974 (-)
LOC120558535 LOC103372586 coding upstream 142 2765018 ~ 2803278 (-)
LOC120558537 NA coding upstream 94404 2859280 ~ 3219783 (-)
LOC120559388 NA coding upstream 294621 3059497 ~ 3067215 (-)
LOC120559391 NA coding upstream 408480 3173356 ~ 3177854 (-)
LOC120559395 NA coding upstream 420402 3185278 ~ 3192170 (-)
G46798 NA non-coding downstream 75722 2686125 ~ 2686554 (-)
LOC120559433 NA non-coding downstream 99564 2660731 ~ 2662712 (-)
G46746 NA non-coding downstream 195826 2496979 ~ 2566450 (-)
LOC120559435 NA non-coding downstream 238778 2522537 ~ 2523498 (-)
G46732 NA non-coding downstream 296474 2464071 ~ 2465802 (-)
trnaq-cug_2 NA non-coding upstream 179380 2944256 ~ 2944327 (-)
trnaq-cug_3 NA non-coding upstream 179977 2944853 ~ 2944924 (-)
LOC120559428 NA non-coding upstream 291697 3056573 ~ 3059454 (-)
G46803 NA non-coding upstream 305300 3070176 ~ 3071400 (-)
LOC120559426 NA non-coding upstream 356336 3121212 ~ 3129853 (-)
G46698 NA other downstream 414772 2346505 ~ 2347504 (-)
LOC120559407 NA other downstream 426575 2329654 ~ 2335701 (-)
rps21 rps21 other downstream 1517048 1236385 ~ 1245228 (-)
G46199 NA other downstream 1780165 976808 ~ 982111 (-)
LOC120558775 adrm1 other downstream 1824074 933032 ~ 938202 (-)
G46817 NA other upstream 518165 3283041 ~ 3285923 (-)
LOC120559401 NA other upstream 726128 3491004 ~ 3493963 (-)
LOC120559679 LOC103384848,LOC102790723,LOC100693496 other upstream 1169635 3934511 ~ 3950171 (-)
G47058 NA other upstream 1190150 3955026 ~ 3955529 (-)
G47059 LOC102202574 other upstream 1190728 3955604 ~ 3956382 (-)

Expression


Co-expression Network