LOC120558537


Basic Information

Item Value
gene id LOC120558537
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 2859280 ~ 3219783 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799574.1
TTCAGGACCAGAGAAGAATGGAGGAGGACAACCAGAACCCGGAGCAGCGGAGCAACGAGGTCCCCAGAAGACCAGCAGCACACTGGGACTCTGATAGCAGccatgttcagGTGCCCTCAGCAGACGTCAAGCTGGCGACCGTAGCAGGAAAGAAGGGCAAGaaggccgaggaggaggagcagcctgcagcacctcctgcagAAGCAGCAGCGGCACCACCAGCCCCAGCAGCTGCcgtcacagcagcagcagcagcagaggaggaagaggaagaggaagaagaagaagaggaggagtatGTGGTGAAGAAGGTTTTGGACCGCAGAGTGGTGAAAGGAAGAGTagagtttctgctgaaatggaagGGGTTCTCAGATGAGGATAACACATGGGAGCCGCAAGACAACCTGAACTGCCTCGACCTTATCACCgagtacatgcagaaacacaaggagaaggaggagaaaaagaaggagggcaagaggaaagttgtcagtgaggcctcgggagactcagaggagcgagggagcaagaggaagaaggaggagaaacagagaggagaagagggacCCAAATGTCACCACTGTCAGCACTGTAACAAATCCTTCACAACATCAaaatatttaaagattcatcagagagttcacactggagagaatctacacagctgtgatcaatgtgagGCAGCTTTCACACTACAGAGTAACCTTAAAATCcaccaacgcattcacactggagagaagccgtacagctgtgatcaatgtggggcagctttcacacaacagggacacctaaaaatacatcaacgcattcacaacTTTGTCCCGGCTGCAGGAAGTCACTGTCACACCACCGTCGCCACGGCGACCCGAGGACCTTCACACCTGTGA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799574.1 True 890 mRNA 0.53 5 2859280 3219783

Neighbor

gene id symbol gene type direction distance location
LOC120558535 LOC103372586 coding downstream 56002 2765018 ~ 2803278 (-)
LOC120558533 NA coding downstream 94404 2762276 ~ 2764876 (-)
LOC120559403 NA coding downstream 98125 2757509 ~ 2761155 (-)
LOC120559408 NA coding downstream 132386 2719103 ~ 2726894 (-)
LOC120558522 NA coding downstream 230078 2627722 ~ 2629202 (-)
LOC120559400 NA coding upstream 32099 3251882 ~ 3253051 (-)
LOC120559411 NA coding upstream 111986 3331769 ~ 3339720 (-)
LOC120559390 NA coding upstream 163907 3383690 ~ 3426321 (-)
LOC120559410 NA coding upstream 238644 3458427 ~ 3459070 (-)
lrrc38a LOC103362254,LOC104932799,LOC101069713,LOC101473207 coding upstream 314296 3534079 ~ 3553937 (-)
G46798 NA non-coding downstream 172726 2686125 ~ 2686554 (-)
LOC120559433 NA non-coding downstream 196568 2660731 ~ 2662712 (-)
G46746 NA non-coding downstream 292830 2496979 ~ 2566450 (-)
LOC120559435 NA non-coding downstream 335782 2522537 ~ 2523498 (-)
G46732 NA non-coding downstream 393478 2464071 ~ 2465802 (-)
LOC120559427 NA non-coding upstream 227426 3447209 ~ 3450188 (-)
G46816 NA non-coding upstream 296920 3516703 ~ 3517741 (-)
G46920 NA non-coding upstream 298654 3518437 ~ 3518669 (-)
G46979 NA non-coding upstream 484238 3704021 ~ 3704389 (-)
G46995 NA non-coding upstream 610976 3830759 ~ 3831182 (-)
G46698 NA other downstream 511776 2346505 ~ 2347504 (-)
LOC120559407 NA other downstream 523579 2329654 ~ 2335701 (-)
rps21 rps21 other downstream 1614052 1236385 ~ 1245228 (-)
G46199 NA other downstream 1877169 976808 ~ 982111 (-)
LOC120558775 adrm1 other downstream 1921078 933032 ~ 938202 (-)
G46817 NA other upstream 63258 3283041 ~ 3285923 (-)
LOC120559401 NA other upstream 271221 3491004 ~ 3493963 (-)
LOC120559679 LOC103384848,LOC102790723,LOC100693496 other upstream 714728 3934511 ~ 3950171 (-)
G47058 NA other upstream 735243 3955026 ~ 3955529 (-)
G47059 LOC102202574 other upstream 735821 3955604 ~ 3956382 (-)

Expression


Co-expression Network