LOC120558555


Basic Information

Item Value
gene id LOC120558555
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 42562646 ~ 42575410 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799602.1
CAAGATGGACAAACTTCTTCTGCTCATCATGGCTGCATCAGGGCTGAGTGCTGTCTCATCAGCTGCTGGACTTCAGTACTATTTTGTTTATGACAGGAAGAACTTTACTGAAGCCCAAAGATactgcagagagaaacacacagacctgGTCACTGTAGACAGCATGGAGGTTATGAAGATCCTGACCAACACGGCAGATTTAGACAACATGGTCTACTCCAACAACAGCTACAGAGCCTGGATAGGACTGTCCCGTGGCAGCTGGAGGTGGTCTCTGTCAGACACAAGTTACTACAAACCCGGGGAGACAGAGTTCAGACGATGGTACTCTGGACGACCAAACGCTGGAGACAGTAGAAAACTCTGCACAGGGATGGGTCCTTATTATAATGGACTCTGGTTAGACAACCTTGGTTGTGGCAGCAGCCGTCATGCAGTCTGTGCAGATGTCAGAGGATCAGATGTGACTTTTATCATCGTCACCAAAGCCCTGACATGGACTCAAGCCCAGAGCTACTGCAGAGATAATCACACAGACCTGGCCAGTGTGAGAAACATGGCAGAGAACCAGAAGGTGCTGGTGAAGATAGCTGGATTAGACTATGTCTGGATCGGCCTTTTCAGAGACTCCTGGAAGTGGTCAGATGGAAGTAACTCCTCATTCAGCTTCTGGAAGACCAGGCAACCTGATGACAACAACGAGACTTGTGTGGCTGCAGActtcagccaatcaggagcCTGGGAGGACTGGCCCTGTGACATGGAGAGAGCGTTCATTTGCTACGGTCCAGTGGTGACTACTTCAAAGAAAGTGCTGAAAGTGAAGTTTGAGAACAAGAACAATGTGGATCTGAATGACCCTGCTGTGATGGAGGCCATGCTGAAGCAGctGAAACAGAAGCTGAGGGCCCAGGGGCTGGACCACAACATCAAACTGAGCTGGAGGAAGCAGGCCGATGGAAAAGTCTTCCACAAGGAAGACAAGAAGACcaacaagaggaggaggaagagggaggagctGTAATGTTGAGTTGCTGCGTCTGGTTTCATCAGAGAAAAGTCTGGTTCTTTGCAAGCAGAAATACTAAatatattcacagcttctagCTTCTCAAACATGaagatttgatgctttttttgttACATTCGATCATAAACTTAATATATTTGAGCTTCAGACTGTTTTTAGAATAAATCAagactttattatttatctgaTTTATCAGCTTTGGGGAAATATAACCAACATGTTTTACTGATTTACTGTTTCTTctttaaaatctattttaatgagataaaatgtctttcttTGTTTGAGAGTAAAGGGTTTTTCACACGGGGAGCGACCCTTGGCCTGCGTAGTCGCGTCATGTGATGGACAACGCTCCGCGATCAATGTGTGGTAACCATGGAGATACTGTATCCCTGCCGTACAACTGGATGAGATCAGCTGACTGTGGTTTCATATCTCCCTAATCACAGGTGGATTTATAACACATAGTGGTAATCCTAGTCTTTCCTAACCACAGACAGTTATTGTtgatagctaaagttagctacaTTAGCATAGTTAGCTACATTAGCATAGTCATGATTACGGACGTCTTGTGCCGATGTTCTGACAACTGTTTAGAAAACACTTTTATATTTCAGTAAACTCACAAACCTAAGAGGAAGTTGCACCACATGAAGGCCCCGACCTTGGCGTGTGAGTGAGTAAGATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799602.1 True 1725 mRNA 0.45 6 42562646 42575410

Neighbor

gene id symbol gene type direction distance location
LOC120558561 NA coding upstream 149000 42412119 ~ 42413646 (+)
LOC120559084 NA coding upstream 151252 42404822 ~ 42411394 (+)
LOC120558560 NA coding upstream 527883 42027772 ~ 42034763 (+)
LOC120558558 NA coding upstream 614119 41945023 ~ 41948527 (+)
LOC120558614 NA coding upstream 892176 41654765 ~ 41670470 (+)
snx21 NA coding downstream 30630 42606040 ~ 42613341 (+)
LOC120559837 LOC102799837 coding downstream 608550 43183960 ~ 43202129 (+)
LOC120558444 LOC106456028 coding downstream 771219 43346629 ~ 43353622 (+)
ndnl2 LOC104951562 coding downstream 907512 43482922 ~ 43520837 (+)
LOC120559932 NA coding downstream 942540 43517950 ~ 43518074 (+)
G57433 NA non-coding upstream 16551 42486746 ~ 42546095 (+)
LOC120558565 samd3,LOC101476819 non-coding upstream 130501 42430089 ~ 42432145 (+)
G57385 NA non-coding upstream 276691 42225347 ~ 42285955 (+)
G57378 NA non-coding upstream 387250 42170665 ~ 42175396 (+)
LOC120558566 NA non-coding upstream 554386 42005511 ~ 42008260 (+)
G57438 NA non-coding downstream 19193 42594603 ~ 42731803 (+)
G57437 NA non-coding downstream 39576 42614986 ~ 42690384 (+)
G57440 NA non-coding downstream 47417 42622827 ~ 42623298 (+)
G57452 NA non-coding downstream 51291 42626701 ~ 42652855 (+)
G57459 NA non-coding downstream 84806 42660216 ~ 42686858 (+)
LOC120558567 NA other upstream 88705 42471896 ~ 42473941 (+)
LOC120558563 NA other upstream 121747 42440002 ~ 42440899 (+)
G56947 NA other upstream 1426083 41119548 ~ 41136563 (+)
LOC120559073 NA other upstream 1458932 41099907 ~ 41103714 (+)
G56847 NA other upstream 2074526 40386328 ~ 40488120 (+)
zgc:113363 LOC103367255 other downstream 802936 43378346 ~ 43385991 (+)
LOC120559089 LOC102209886,LOC102308207,LOC103153489 other downstream 1265437 43840847 ~ 43953510 (+)
LOC120559493 NA other downstream 1406592 43982002 ~ 43984512 (+)
G57886 LOC102210967,LOC101485965,LOC101163152 other downstream 1442789 44018199 ~ 44027129 (+)
LOC120559729 usp11 other downstream 1475333 44050743 ~ 44098847 (+)

Expression


Co-expression Network