LOC120558578 (LOC103467546,LOC102230394,LOC106947997,LOC105927130,LOC103145058,LOC101167287,LOC104935375)


Basic Information

Item Value
gene id LOC120558578
gene name LOC103467546,LOC102230394,LOC106947997,LOC105927130,LOC103145058,LOC101167287,LOC104935375
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 17098625 ~ 17104961 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799623.1
gaaaagaggaaacagaAGTGCTAGTGTAGCGGAAGTGGTACTGCCCTGAACGATACGCTGAGCGAGACGGAGGACGGAGGCTGAATcgtccagagagagagaaaaaaagcaggACTAAAAGTCGCCAATATTTCTAGAAAATGGATAAGAACGACCTGGTACAGAAGGCCAAGCTTGCTGAGCAGGCTGAGCGCTACGATGACATGGCCGCAGCCATGAAGTCGGTGACAGAGCAAGGTGCGGAGTTATCAAATGAGGAGCGCAACCTTCTCTCTGTTGCCTACAAGAATGTAGTAGGAGCACGCCGCTCATCCTGGCGCGTCATCTCCAGCATCGAGCAGAAGACTGAGGGCAATGACAAAAAACAGCAGATGGCACGTGAATACCGGGAGAAGATTGAAGCTGAGCTGCAGGAAATCTGCCATGATGTGCTCGGGTTACTGGACAACTTTCTCATTAGCAATGCAACTGCTGCTGAGAGCAAGGTGTTCTATCTGAAAATGAAAGGCGACTATTATAGATACTTGTCTGAGGTTGCATCTGGGGATGCTAAAAAGGATACAGTGGATAATTCCCAGCAGGCGTACCAGCAAGCTTTCGACATCAGCAAGGGGGAGATGCAGCCAACACACCCTATTCGGCTTGGCCTGGCCCTCAACTTCTCAGTCTTCTACTATGAAATCCTCAACAACCCGGACAAGGCCTGCAGCCTGGCTAAGACGGCATTTGATGACGCCATCGCTGAACTTGACACTTTGAACGAGGATTCTTACAAAGACAGCACCCTGATCATGCAACTACTAAGGGACAACCTCACTCTGTGGACATCAGAAAACCAGGCAGATGAGGGAGAGACCGGAGATGGGGAAAACTAATGGAATTGCACTGTTAATCCACCTACACTCTTATCTTAAACACAGACAGCTTATATACATCCCCCTCCACTCCATCAGCTCCTCCCACTTCTGTATGACAAGCAGCCTGAATTGCTCCTGACCAACTAGTTTACCCCTCTCAGTTCACTGTGAGGTGACAGGGTAATTTTCAGTAAGCAGATTCAGTCACTTTGTGGAAACATGTTGTATTGATTAGCGAGTCcatgttgctgttgtttttgtcggctttgtgtgtatgtctgtatgtagtgAGTGAGAAAGGATGTGaaagattgtgtgtgtatggtctgggggggagggggtgttgTGAATTCTAATCGTCCTTCCAAATCCCTTTGTCCCAGCTAGTTAGTTGTGcatttttcatcccttttttgtTACTTTCTTATTTGTGATTCCTCATGATATTTACAGGTTTTATTGTATGGTAATTAAACAGGCAGTTGATTTCCACCAAACACTGTGATGGTAGGCGTTCCATTTGCTTCACAACCCCaaaacagtttttgtgtttgaATTTCCAGACGCGTACAATCCTGTATTAACAACTAACTGCAATTCTGCTGTGGGCTCATACAGAAAGGAGGCAGGCTGTATTGTGACACTGACATCTTGGTGTAATGCTCCTTGATCATGTTCACAAATTCACAGTTTTGAAGTTTTAAGGGACCCCTTTAAATTGTCATGTTAGATTTGTCCAGACATCAGACATTCCACATTTATTAGGCTTTTGGAAAGGCAGTGCTCCTTTTTGGTTTTTTTGAACTAAGTATGGATTGTCATTGTAGTTTTACTCACTGTTCAGGTGCTGCTTGATATCAGTACAATGAAAATTGTATGTGCGTAAATGTGGTTCCATGTATTTTGCAAGATTGACTATCATCTGTATGTAAAACCTAAAGTAACCTTTTATTGATGTTAATTGAAAATGTCTTACCACACTGTATCAACCCTGCTTGCAAAATATTCCTCTTAAAGTGGTTgttttctccaaaaaaaaatctgtgccTGGCTTTCTCTTGCAGCCTTTTTGGCAGCATCTGCTTGTCGTTTTAAGAAATCTCAAAGGGAACGTGTAAGGCAAGACAAATTTTAATTGCTAAATCTTGACCTCAGTTTTTACCCAGGTGCATCTCTCTGCGGTTAATGATAGGTGGTGTGAATGATCGCCTCAAAAATCAGGTCTATTTTGACGGTGCAATTTGGAGACGCCCAATCCATCACTTTGGAAAGAAGCTCAGTGTCACAATACCATTTATCACCACTACATTCCACATATTGTAGTTGAAGACACCATTCCACATTATAGCTGACAGTCTGTTTACTCTGACAATGCTCCAATGAATTGAAATAtcttctgtttaaaaaaaaaaaaaaaaaaaaaatcatgtcagCTTATTATTATGCTTGATGAAAATGCAGTTAGTGAATGTGGAACGAAGCCTGTCTGTATATCAGGTATCTACTTGCTTTGTTTTTACTGACAAGTCTTATGGCTAAAAATTTGCTTCTGTAACAGTCTATTACCCAGTGCACACACGTGGTTGTGAAAATTTAGAATAGCTCTAAAAAGCAATGACGACATGGAGATAAACAATGGTTGGTGTAATTCTAGCTTTGTGTTTATGTATCTTAAAACCATTCTAGTTTCACTATACATGTAAGAAATAGGAAAGTGTCAAAGACCATTCAGTGAAATAAAGTTTCGTTTAAGATAA
>XM_039799624.1
AGCGGAAGTGGTACTGCCCTGAACGATACGCTGAGCGAGACGGAGGACGGAGGCTGAATcgtccagagagagagaaaaaaagcaggACTAAAAGTCGCCAATATTAAAATGGATAAGAACGACCTGGTACAGAAGGCCAAGCTTGCTGAGCAGGCTGAGCGCTACGATGACATGGCCGCAGCCATGAAGTCGGTGACAGAGCAAGGTGCGGAGTTATCAAATGAGGAGCGCAACCTTCTCTCTGTTGCCTACAAGAATGTAGTAGGAGCACGCCGCTCATCCTGGCGCGTCATCTCCAGCATCGAGCAGAAGACTGAGGGCAATGACAAAAAACAGCAGATGGCACGTGAATACCGGGAGAAGATTGAAGCTGAGCTGCAGGAAATCTGCCATGATGTGCTCGGGTTACTGGACAACTTTCTCATTAGCAATGCAACTGCTGCTGAGAGCAAGGTGTTCTATCTGAAAATGAAAGGCGACTATTATAGATACTTGTCTGAGGTTGCATCTGGGGATGCTAAAAAGGATACAGTGGATAATTCCCAGCAGGCGTACCAGCAAGCTTTCGACATCAGCAAGGGGGAGATGCAGCCAACACACCCTATTCGGCTTGGCCTGGCCCTCAACTTCTCAGTCTTCTACTATGAAATCCTCAACAACCCGGACAAGGCCTGCAGCCTGGCTAAGACGGCATTTGATGACGCCATCGCTGAACTTGACACTTTGAACGAGGATTCTTACAAAGACAGCACCCTGATCATGCAACTACTAAGGGACAACCTCACTCTGTGGACATCAGAAAACCAGGCAGATGAGGGAGAGACCGGAGATGGGGAAAACTAATGGAATTGCACTGTTAATCCACCTACACTCTTATCTTAAACACAGACAGCTTATATACATCCCCCTCCACTCCATCAGCTCCTCCCACTTCTGTATGACAAGCAGCCTGAATTGCTCCTGACCAACTAGTTTACCCCTCTCAGTTCACTGTGAGGTGACAGGGTAATTTTCAGTAAGCAGATTCAGTCACTTTGTGGAAACATGTTGTATTGATTAGCGAGTCcatgttgctgttgtttttgtcggctttgtgtgtatgtctgtatgtagtgAGTGAGAAAGGATGTGaaagattgtgtgtgtatggtctgggggggagggggtgttgTGAATTCTAATCGTCCTTCCAAATCCCTTTGTCCCAGCTAGTTAGTTGTGcatttttcatcccttttttgtTACTTTCTTATTTGTGATTCCTCATGATATTTACAGGTTTTATTGTATGGTAATTAAACAGGCAGTTGATTTCCACCAAACACTGTGATGGTAGGCGTTCCATTTGCTTCACAACCCCaaaacagtttttgtgtttgaATTTCCAGACGCGTACAATCCTGTATTAACAACTAACTGCAATTCTGCTGTGGGCTCATACAGAAAGGAGGCAGGCTGTATTGTGACACTGACATCTTGGTGTAATGCTCCTTGATCATGTTCACAAATTCACAGTTTTGAAGTTTTAAGGGACCCCTTTAAATTGTCATGTTAGATTTGTCCAGACATCAGACATTCCACATTTATTAGGCTTTTGGAAAGGCAGTGCTCCTTTTTGGTTTTTTTGAACTAAGTATGGATTGTCATTGTAGTTTTACTCACTGTTCAGGTGCTGCTTGATATCAGTACAATGAAAATTGTATGTGCGTAAATGTGGTTCCATGTATTTTGCAAGATTGACTATCATCTGTATGTAAAACCTAAAGTAACCTTTTATTGATGTTAATTGAAAATGTCTTACCACACTGTATCAACCCTGCTTGCAAAATATTCCTCTTAAAGTGGTTgttttctccaaaaaaaaatctgtgccTGGCTTTCTCTTGCAGCCTTTTTGGCAGCATCTGCTTGTCGTTTTAAGAAATCTCAAAGGGAACGTGTAAGGCAAGACAAATTTTAATTGCTAAATCTTGACCTCAGTTTTTACCCAGGTGCATCTCTCTGCGGTTAATGATAGGTGGTGTGAATGATCGCCTCAAAAATCAGGTCTATTTTGACGGTGCAATTTGGAGACGCCCAATCCATCACTTTGGAAAGAAGCTCAGTGTCACAATACCATTTATCACCACTACATTCCACATATTGTAGTTGAAGACACCATTCCACATTATAGCTGACAGTCTGTTTACTCTGACAATGCTCCAATGAATTGAAATAtcttctgtttaaaaaaaaaaaaaaaaaaaaaatcatgtcagCTTATTATTATGCTTGATGAAAATGCAGTTAGTGAATGTGGAACGAAGCCTGTCTGTATATCAGGTATCTACTTGCTTTGTTTTTACTGACAAGTCTTATGGCTAAAAATTTGCTTCTGTAACAGTCTATTACCCAGTGCACACACGTGGTTGTGAAAATTTAGAATAGCTCTAAAAAGCAATGACGACATGGAGATAAACAATGGTTGGTGTAATTCTAGCTTTGTGTTTATGTATCTTAAAACCATTCTAGTTTCACTATACATGTAAGAAATAGGAAAGTGTCAAAGACCATTCAGTGAAATAAAGTTTCGTTTAAGATAA

Function

NR:

description
PREDICTED: 14-3-3 protein beta/alpha-1-like

GO:

id name namespace
GO:0019904 protein domain specific binding molecular_function

KEGG:

id description
K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799623.1 True 2614 mRNA 0.42 6 17098625 17104961
XM_039799624.1 False 2582 mRNA 0.42 6 17098625 17104934

Neighbor

gene id symbol gene type direction distance location
pabpc1l LOC104935356,LOC100697848,LOC102784553,LOC102215180,LOC101469158,LOC102298035 coding downstream 125 17080239 ~ 17098500 (-)
LOC120559002 NA coding downstream 97316 17000401 ~ 17001309 (-)
LOC120559259 LOC104927913,LOC103374533,LOC104956322,LOC106571864 coding downstream 126332 16961498 ~ 16972293 (-)
fmodb fmod coding downstream 138944 16954885 ~ 16959681 (-)
LOC120559618 magi1,LOC104927908,LOC103368435,LOC102193390,LOC102291253 coding downstream 182243 16823774 ~ 16916382 (-)
kctd6b kctd6,LOC101466953,LOC104935404,LOC100692855,LOC107097548,LOC103354431 coding upstream 11189 17116150 ~ 17119562 (-)
abhd6b abhd6,LOC103354432 coding upstream 14705 17119666 ~ 17124287 (-)
slmapb LOC103354436,LOC104935421 coding upstream 25321 17130282 ~ 17141944 (-)
si:ch73-233m11.2 NA coding upstream 48527 17153488 ~ 17157550 (-)
LOC120559621 LOC104935447 coding upstream 53843 17158804 ~ 17162048 (-)
G50484 rbm39,LOC103373755 non-coding downstream 19330 17074875 ~ 17079295 (-)
G50483 rbm39 non-coding downstream 23892 17071122 ~ 17074733 (-)
G50477 NA non-coding downstream 33351 17064997 ~ 17065274 (-)
G50476 NA non-coding downstream 33879 17063818 ~ 17064746 (-)
G50443 NA non-coding downstream 153653 16944771 ~ 16944972 (-)
G50548 NA non-coding upstream 43245 17148206 ~ 17150051 (-)
G50549 NA non-coding upstream 46356 17151317 ~ 17151938 (-)
G50553 NA non-coding upstream 47239 17152200 ~ 17153427 (-)
G50567 slc6a6,LOC106905582,LOC103145023,LOC101165803 non-coding upstream 85116 17190077 ~ 17193635 (-)
G50561 NA non-coding upstream 98786 17203747 ~ 17205629 (-)
G50217 fgd3,LOC104966710 other downstream 814769 16281044 ~ 16283856 (-)
G49845 naca,LOC107737655,LOC106571941 other downstream 2244808 14845338 ~ 14853817 (-)
map3k12 LOC104930685,LOC103358642 other downstream 2547067 14539788 ~ 14551558 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other downstream 2564020 14532124 ~ 14534605 (-)
LOC120558545 LOC104942567,LOC103358644 other downstream 2665631 14416336 ~ 14432994 (-)
LOC120559328 smim4 other upstream 1873 17106834 ~ 17115047 (-)
G50712 birc7 other upstream 583154 17688115 ~ 17689760 (-)
zbtb46 zbtb46,LOC102795869 other upstream 730119 17835080 ~ 17895082 (-)
samd10b samd10,LOC107570869 other upstream 869332 17974293 ~ 18101572 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other upstream 1769794 18874755 ~ 18886895 (-)

Expression


Co-expression Network