LOC120558639


Basic Information

Item Value
gene id LOC120558639
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 22081519 ~ 22090163 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799723.1
gccggaaacaacaacagctgtgTTTCACAATGCCAGAAAAATCATTGAGAAAATGTTTAGATCCATTTTTGGAATAAAATTCTTTACAAGACCTCGGTCTTCAGGAGATATGGACTCTTCTTCGAAGAAGTCCAAACGAAGGAGTGAGAGACCTTCGTCTCTTGAAGACCTCAACCCTCCCACCATCTTGAGGGAGCATGGACGAAGGGGTGAGAGACCTTCGTCTAGTGGAGACACCAACCCTTCTACCATCATGAAGGAGCACAGATAAAGGTGTGAGGGCCCTTTGTCTTGTGCAGAAAACCAGCCCTCTATCACCAGGCAGCAAGAACGAAGGGATGTGAGCTCTTTGTTCATCGTGGGCACCAACCCTTCTACCATCATGAAGGAGCGCAGGCAAAGGGGTGAGAGCCCTTTGTCTTGTGCAGAACACAAGCCCTCTACCACCAGGCAGCACGTACAAAGGGGTGACAGCCCTTCCTCTACTCCAAGGCGGCAGCAAGCATGGAGAGGTGAGAGCCCTTCATCTACTCCAAAGCGGCAGCAAGCATGGAGAGGTGAGAGcccttcctcttcatcttctGAAGACAAGCAGCCTACTACTCGGAGGCGGCAGCAAGCATGGAGGGGTGAGAGCCCTTCGTCATCATCTTCTGAAGATGACCAGCGTTCTACCTTAAGGCAGCAAGTACGAAGGGATGTTCATCGTGGGCACCAACCCTTCTGCCATCATGAAGGAGAGCAGGCAAAGGGGTGAGAGCgctttgtcttcctcttctgAAGAGGATGAGCCTTCTACCACCAGGCAGGCAGTACGAAGGTTTGAGAGCCCTTCCTATTCATCCTTTGAAGACAAGCAGCCTACTACTCCAAGGCGGCAGCAAGCATGGAGAGGTGAGAGTCCTTCGTCGTCATCTTCTGAAGATGACCAGCGTTGTACCACCAGGCTGCTAGTACGAAGGGATGTGAGCTCTTTGTTCATCGTGGCCACCAATCCTTCTACCATCACGAACGAGCGCAGGCAAAGGGGTGAGAGCCCTTTGTCTTGTGCAGAAAACCAGCCCTCTACCACCAGGCAGCAAGTACGAAGGTTTGAGAGCCCTTTGTCGTCATCTTCTAAAGATGACCAGCGTTCTACCACCAGGCAGCAAGAACAAAAGGATGTGAGCTCTTTGTTCTTCGTAGGCACAAACATGAAGGAGCGCAGGCGAAAGGGTGAGAGCCCTTTGTCTTGTGCAGAAAACATGCCCTTTACCACCAGTGCAAGAAAGGAGAGGGAGATCATtgaaagagaaaagcagcatttggaggaggagggtttaaaaagagaaagagagaggtgtgaaaagatgaagagaaagaaccaggagaaggagaggaaaacaTTTGGTCTGCGTTCAAGAATGTACATTTGGTGGCTCAATTGCAAGATAGACAACATTGCCAGGGACATCCAATCAACCTTTGTGGATGAGCGCTACCGCCTGCGTCATGATCCCCTCAGAAATCCAgagaaaatggcagaaaaagaACGGCTGCTTGACCGAAGGAGGGAGCTGGTCATGTACAAACGCAGACAAGAATTTAAGGTGGAGAGGGAAGGGAGGAAGCAAAGACTGAAGGTAGAGAGGAAGGAAATAAATGCGAAGAAGTTGGAGAATATCTCTGAGTTATGCAGCAACTCAGAATACCCAGCTATGTTAAAATTTCTCTACGGACCAATGCCAGTCAggtcacatatatatatatatcaattaaGATAAAAGTAGAGCAATCAGAAAAATGGCACCAAATAGAGAGAGGTAATTGAGGGAGACGGCAAAAACTTCAGATTTGACAAAACAGaagtaaagaaaagtaaaatattcttttaaaacattagcaaccaCCATCAAATATCCTTGTAACCACATGATAACACCCTAGATGTTGGCTTTAATTTAGTTATACAGTCAAAGAGCATTGTGCAAATAACAGTGTCCTAACTTAATGCCACCTGACCCAATCTAATTCATCCTAACCTAGGCTAATTTAACCAAGGTTAGCCCAACACCTATCCTAATTTAGCTTTGGTTAGGCTCTGGCAGAGaccttagggttagggttagaccctaaagacagtagaaagaaggaaggcaacactagggcgacaaa
>XM_039799724.1
AAGAAGCCTAGCTACACTGTTCGCAAAATCTACTAGATGTTGTTaatatatgtcaatggatgTTCCTCCAGGAagcacacacagtcaaactcaaacaagaaaaaggaagaaataaaCAGAATAAGAACCATCTCTCAGCTCTTCATTTCAAACTCTGGAATATTTGCCTTAAGTGGTGTTCTGGCTGACATACCTGAGTGAACCTGTTTCACAATGCCAGAAAAATCATTGAGAAAATGTTTAGATCCATTTTTGGAATAAAATTCTTTACAAGACCTCGGTCTTCAGGAGATATGGACTCTTCTTCGAAGAAGTCCAAACGAAGGAGTGAGAGACCTTCGTCTCTTGAAGACCTCAACCCTCCCACCATCTTGAGGGAGCATGGACGAAGGGGTGAGAGACCTTCGTCTAGTGGAGACACCAACCCTTCTACCATCATGAAGGAGCACAGATAAAGGTGTGAGGGCCCTTTGTCTTGTGCAGAAAACCAGCCCTCTATCACCAGGCAGCAAGAACGAAGGGATGTGAGCTCTTTGTTCATCGTGGGCACCAACCCTTCTACCATCATGAAGGAGCGCAGGCAAAGGGGTGAGAGCCCTTTGTCTTGTGCAGAACACAAGCCCTCTACCACCAGGCAGCACGTACAAAGGGGTGACAGCCCTTCCTCTACTCCAAGGCGGCAGCAAGCATGGAGAGGTGAGAGCCCTTCATCTACTCCAAAGCGGCAGCAAGCATGGAGAGGTGAGAGcccttcctcttcatcttctGAAGACAAGCAGCCTACTACTCGGAGGCGGCAGCAAGCATGGAGGGGTGAGAGCCCTTCGTCATCATCTTCTGAAGATGACCAGCGTTCTACCTTAAGGCAGCAAGTACGAAGGGATGTTCATCGTGGGCACCAACCCTTCTGCCATCATGAAGGAGAGCAGGCAAAGGGGTGAGAGCgctttgtcttcctcttctgAAGAGGATGAGCCTTCTACCACCAGGCAGGCAGTACGAAGGTTTGAGAGCCCTTCCTATTCATCCTTTGAAGACAAGCAGCCTACTACTCCAAGGCGGCAGCAAGCATGGAGAGGTGAGAGTCCTTCGTCGTCATCTTCTGAAGATGACCAGCGTTGTACCACCAGGCTGCTAGTACGAAGGGATGTGAGCTCTTTGTTCATCGTGGCCACCAATCCTTCTACCATCACGAACGAGCGCAGGCAAAGGGGTGAGAGCCCTTTGTCTTGTGCAGAAAACCAGCCCTCTACCACCAGGCAGCAAGTACGAAGGTTTGAGAGCCCTTTGTCGTCATCTTCTAAAGATGACCAGCGTTCTACCACCAGGCAGCAAGAACAAAAGGATGTGAGCTCTTTGTTCTTCGTAGGCACAAACATGAAGGAGCGCAGGCGAAAGGGTGAGAGCCCTTTGTCTTGTGCAGAAAACATGCCCTTTACCACCAGTGCAAGAAAGGAGAGGGAGATCATtgaaagagaaaagcagcatttggaggaggagggtttaaaaagagaaagagagaggtgtgaaaagatgaagagaaagaaccaggagaaggagaggaaaacaTTTGGTCTGCGTTCAAGAATGTACATTTGGTGGCTCAATTGCAAGATAGACAACATTGCCAGGGACATCCAATCAACCTTTGTGGATGAGCGCTACCGCCTGCGTCATGATCCCCTCAGAAATCCAgagaaaatggcagaaaaagaACGGCTGCTTGACCGAAGGAGGGAGCTGGTCATGTACAAACGCAGACAAGAATTTAAGGTGGAGAGGGAAGGGAGGAAGCAAAGACTGAAGGTAGAGAGGAAGGAAATAAATGCGAAGAAGTTGGAGAATATCTCTGAGTTATGCAGCAACTCAGAATACCCAGCTATGTTAAAATTTCTCTACGGACCAATGCCAGTCAggtcacatatatatatatatcaattaaGATAAAAGTAGAGCAATCAGAAAAATGGCACCAAATAGAGAGAGGTAATTGAGGGAGACGGCAAAAACTTCAGATTTGACAAAACAGaagtaaagaaaagtaaaatattcttttaaaacattagcaaccaCCATCAAATATCCTTGTAACCACATGATAACACCCTAGATGTTGGCTTTAATTTAGTTATACAGTCAAAGAGCATTGTGCAAATAACAGTGTCCTAACTTAATGCCACCTGACCCAATCTAATTCATCCTAACCTAGGCTAATTTAACCAAGGTTAGCCCAACACCTATCCTAATTTAGCTTTGGTTAGGCTCTGGCAGAGaccttagggttagggttagaccctaaagacagtagaaagaaggaaggcaacactagggcgacaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799723.1 False 2154 mRNA 0.47 3 22081519 22090163
XM_039799724.1 True 2338 mRNA 0.46 4 22081519 22088049

Neighbor

gene id symbol gene type direction distance location
ssr4 ssr4 coding downstream 4683 22065075 ~ 22076836 (-)
fam3a fam3a,LOC102798212 coding downstream 58873 22016334 ~ 22022646 (-)
phf8 phf8,LOC102799568 coding downstream 112320 21957952 ~ 21969199 (-)
huwe1 NA coding downstream 124205 21898157 ~ 21957314 (-)
l1cama l1cam coding downstream 202639 21828929 ~ 21878880 (-)
LOC120558638 LOC104967523 coding upstream 2343 22092506 ~ 22103785 (-)
naa10 naa10,LOC106572706 coding upstream 15460 22105623 ~ 22109060 (-)
LOC120558646 LOC104967526,LOC103363731 coding upstream 30437 22120600 ~ 22124974 (-)
galnt6 LOC100705948,LOC102305018,LOC103363730 coding upstream 35250 22125413 ~ 22134643 (-)
LOC120559233 LOC104967529,LOC103363729,LOC103384589 coding upstream 45161 22135324 ~ 22173008 (-)
LOC120559667 NA non-coding downstream 1063 22079899 ~ 22080456 (-)
G52013 NA non-coding downstream 20595 22060712 ~ 22060924 (-)
G52010 avpr2,LOC107591070,LOC107673055 non-coding downstream 26420 22053714 ~ 22055099 (-)
G52009 NA non-coding downstream 33790 22046768 ~ 22047729 (-)
G51978 NA non-coding downstream 123808 21957461 ~ 21957711 (-)
G52126 NA non-coding upstream 152360 22242523 ~ 22243328 (-)
G52124 NA non-coding upstream 153648 22243811 ~ 22266053 (-)
G52127 LOC106567007,LOC105928945,LOC103368323 non-coding upstream 156947 22247110 ~ 22248083 (-)
G52128 LOC101065051,LOC100704616 non-coding upstream 157974 22248137 ~ 22248720 (-)
G52135 NA non-coding upstream 213002 22303165 ~ 22303794 (-)
si:dkey-151g10.3 wnk3 other downstream 66476 21970052 ~ 22015043 (-)
esyt1a LOC104932417,LOC104956886,LOC103356920 other downstream 864800 21199340 ~ 21216719 (-)
fmnl3 fmnl3 other downstream 882476 21167904 ~ 21199043 (-)
LOC120558386 hoxc10,LOC100690382 other downstream 1129001 20820171 ~ 20952518 (-)
LOC120558911 LOC103362803,LOC100693258 other downstream 2266201 19799205 ~ 19815318 (-)
LOC120559880 LOC104932903,LOC103358260,LOC104967532,LOC107390844 other upstream 132986 22223149 ~ 22229421 (-)
G52226 NA other upstream 439443 22529606 ~ 22530708 (-)
si:ch211-150o23.3 LOC103367744,LOC101075068 other upstream 1123935 23214098 ~ 23218900 (-)
G52501 eno1,LOC104965722,LOC103151087 other upstream 1218337 23308500 ~ 23319684 (-)
masp2 masp2,LOC106536928,LOC103357864,LOC107086886 other upstream 2244986 24335149 ~ 24339456 (-)

Expression


Co-expression Network