LOC120558646 (LOC104967526,LOC103363731)


Basic Information

Item Value
gene id LOC120558646
gene name LOC104967526,LOC103363731
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 22120600 ~ 22124974 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799731.1
CCAAAGGGAAATGAGAGTGGCCACAGTagggacagacagaccagaTGATGAGCTCTGAGCCTTTGACCAGCTCTGAGGTGTTTGGACAGCTCAGGAGAGAGCTCTATGGAGAGGAGCTGTCCAGTCCTTCCAATGCACACATATTCATCATCCTGGGAGCCTCTGGGGATCTCGCTAAAAAGAAGATCTATCCAACTTTATGgTGGTTATTCAGAGATGGCCTGCTCCCTGATGACACCTACTTTGTGGGTTTTGCAAGGACTAAGCTGACCGTGGAGGACATCAAGACAGCATGTCTGCCTCATATGAAGGTCACTGATGAAGAGAGTGAGCGTCTCTTGGCCTTCTTCAGTAAGAACTCCTACCTGAGCGGCTGGTATGACGACAACAGCTCTTTCGCTCAACTCACCGCTCATCTGTCATCTCTGCCTGGGGGAGCTGACGCCAACAGACTCTTCTACCTGGCCCTGCCACCCACTGTGTACAATCTTGTCAGCACAAATATCAGAACCCACTGCATGAGCCGCAAaggCTGGAGCAGGGTAATTGTTGAGAAGCCCTTTGGTCGTGACCTCCAGAGCTCACAGGAGCTGTCAGCCCACCTTTCCTCCCTGTTCACAGAGGACCAGATCTACCGCATAGACCACTACCTGGGAAAAGAGATGGTCCAGAACCTCATGGTGCTCAGGTTTGGAAATCGCATCTTTGGACCCATATGGAACAGGAACAGTGTGGCGTCTGTGGTCCTCACCTTCAAGGAGCCTTTTGGCACTCAGGGCCGCGGAGGATACTTTGATGACTTTGGCATCATTCGAGATGTCATGCAGAACCATCTCCTCCAGATGCTGTGTTTGGTCGCCATGGAGAAACCTGCTTCCACCAGCCCAGATGACGTGAGGGATGAGAAGGTGAAAGTGTTGAAGTGTACAGCTCCTGTTACTGGGTCAGATGTGGTGCTCGGCCAGTACGTGGGGGACCCTGAGGGTGAGGGCCCCTCCAAGCTGGGTTACCTTGACGACCCCACTGTACCAGAAGGCTCCTGCACGCCAACATTTGCCACTGCAGTGCTCTATGTCCAGAATGAAAGATGGGATGGAGTTCCTTTTATTCTCCGCTGCGGTAAAGCTCTGAATGAACGTAAGTCAGAAGTGCGTCTGCAGTTCACTGACGTACCAGGAGACATCTTTGGCGAACGCTGTCAGAGGAACGAGCTGGTGGTCCGGGTGCAGCCGGACGAAGCCATTTACCTGAAGATGATGACCAAGAGGCCTGGGGTTTACTTCAGCCCAGAGGAGACTGAGCTGGACCTCACCTACAGGAGTAGATACAAGAACGTGAAGCTTCCAGATGCTTACGAGAGGCTGATACTGGATGTCTTCTGTGGAAACCAGATGCACTTTGTCCGCAGTGATGAGTTGCGGGAGGCCTGGAGGATCTTCACTCCCCTCCTCCAACAAAtagaaggagagaagacacaCCCCATCCCTTACATATATGGAAGTCGTGGTCCAAACGAGGCGGATGATCTCCTGAAGAGGGTGGGATTCCGCTATGAGGGAACATACAAGTGGATGCAGCCCCACACAACATGAtctgtcacacatgcacacaacacacgcgcacacaacacacacacaccaatgtaGGCAAGTTTCTAAACAATAAAGTTCACTACAGTCTTTCACTG

Function

NR:

description
PREDICTED: glucose-6-phosphate 1-dehydrogenase-like

GO: NA

KEGG:

id description
K00036 G6PD, zwf; glucose-6-phosphate 1-dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799731.1 True 1687 mRNA 0.52 12 22120600 22124974

Neighbor

gene id symbol gene type direction distance location
naa10 naa10,LOC106572706 coding downstream 11540 22105623 ~ 22109060 (-)
LOC120558638 LOC104967523 coding downstream 16815 22092506 ~ 22103785 (-)
LOC120558639 NA coding downstream 30437 22081519 ~ 22090163 (-)
ssr4 ssr4 coding downstream 43764 22065075 ~ 22076836 (-)
fam3a fam3a,LOC102798212 coding downstream 97954 22016334 ~ 22022646 (-)
galnt6 LOC100705948,LOC102305018,LOC103363730 coding upstream 439 22125413 ~ 22134643 (-)
LOC120559233 LOC104967529,LOC103363729,LOC103384589 coding upstream 10350 22135324 ~ 22173008 (-)
dtx3 LOC103368342,LOC104967533 coding upstream 106173 22231147 ~ 22237208 (-)
stat6 LOC104967536 coding upstream 126280 22251254 ~ 22274480 (-)
fignl2 fignl2,LOC104932960,LOC104962574 coding upstream 154428 22279402 ~ 22295441 (-)
LOC120559667 NA non-coding downstream 40144 22079899 ~ 22080456 (-)
G52013 NA non-coding downstream 59676 22060712 ~ 22060924 (-)
G52010 avpr2,LOC107591070,LOC107673055 non-coding downstream 65501 22053714 ~ 22055099 (-)
G52009 NA non-coding downstream 72871 22046768 ~ 22047729 (-)
G51978 NA non-coding downstream 162889 21957461 ~ 21957711 (-)
G52126 NA non-coding upstream 117549 22242523 ~ 22243328 (-)
G52124 NA non-coding upstream 118837 22243811 ~ 22266053 (-)
G52127 LOC106567007,LOC105928945,LOC103368323 non-coding upstream 122136 22247110 ~ 22248083 (-)
G52128 LOC101065051,LOC100704616 non-coding upstream 123163 22248137 ~ 22248720 (-)
G52135 NA non-coding upstream 178191 22303165 ~ 22303794 (-)
si:dkey-151g10.3 wnk3 other downstream 105557 21970052 ~ 22015043 (-)
esyt1a LOC104932417,LOC104956886,LOC103356920 other downstream 903881 21199340 ~ 21216719 (-)
fmnl3 fmnl3 other downstream 921557 21167904 ~ 21199043 (-)
LOC120558386 hoxc10,LOC100690382 other downstream 1168082 20820171 ~ 20952518 (-)
LOC120558911 LOC103362803,LOC100693258 other downstream 2305282 19799205 ~ 19815318 (-)
LOC120559880 LOC104932903,LOC103358260,LOC104967532,LOC107390844 other upstream 98175 22223149 ~ 22229421 (-)
G52226 NA other upstream 404632 22529606 ~ 22530708 (-)
si:ch211-150o23.3 LOC103367744,LOC101075068 other upstream 1089124 23214098 ~ 23218900 (-)
G52501 eno1,LOC104965722,LOC103151087 other upstream 1183526 23308500 ~ 23319684 (-)
masp2 masp2,LOC106536928,LOC103357864,LOC107086886 other upstream 2210175 24335149 ~ 24339456 (-)

Expression


Co-expression Network