hsd17b10 (hsd17b10)


Basic Information

Item Value
gene id hsd17b10
gene name hsd17b10
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 7590901 ~ 7599774 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799769.1
CTTtccagttggtggcggtaatgcaccgTTACGTTGCCAAAAGATAAAAAgctcaaaaagaagaagacaagcCAGACCAACATGGCGAACATTCGGTGTGTCAAGGGTATGGTTGGCCTTGTGACGGGCGGTGCGTCCGGTCTGGGCCGGGCCACTGTGGAGCGGCTGGTCCAGAACGGAGCGTCTGCGGTGATCCTGGACCTGCCCTCGTCTGATGGACCGGCTCTGGCAGCCAGTCTGGGGGACCGCTGTGCCTTCGCTCCTGCAGACGTGACGTCGGAGGCAGACGTGCAGTCAGCCGTGTCCCTGGCCAGAGAGAAGTTTGGGAAGCTGGACCTGGCGGTTAACTGTGCCGGCATCGCCGTCGCTGTTAAAACGTACAACTTTAAGAAGGACCTCCCTCACAGCCTGGAGGACTTCCAGCGTGTCATCAATGTGAACATCGCAGGAACCTTTAATGTGATCCGCCTGGCTGTGGGTGCGATGGGGAAGAACGAGCCTGACGCTGATGGACACCGAGGCTGCATCATCAACACGGCCAGCGTGGCCGCCTTTGACGGACAGGTTGGCCAAGCAGCATATTCGGCTTCTAAAGGTGGCATCGTTGGAATGACCCTCCCTATCGCACGAGACCTGGCACCCATGGGCATCCGAGTCATCACCATAGCACCCGgtCTGTTCTCCACGCCCCTCCTGGCTGGTCTCCCAGAGAAGGTGCGCTCCTTCCTCGCCCGCCAGGTGCCCTTCCCCTCGCGCCTGGGAGACCCCGCTGAGTTTGCCCACCTGGTGACCGCGCTGGCTGAGAACCCCATGATTAATGGAGAGGTGATCAGACTGGACGGAGCCATTCGCATGCAGCCCTGAGTCGGACGGCgcgcgtgtgtctgtctgtctgcgggGCCACGATAACGAGGCGTTGATCACCACCTTCCTCAAATTAAGAACACTTTTATGTCTTGAGTATGCGTGTGCCTGGCTACCTGGTGTAGTTTTGTTGGAGAAAGCTGCATACGGTAAACATGAACTGTGATGGATCAGAAACACCATTTATCAAGTTTGTGAGAGAAAGTGTGTAAAAAATGTCTGTACATCATTCAGAGCATTGCAGTACTTTATGAACTCCACCTTGGTTGTTTTGTAAACTAATCCAGATTATAATAAACCTCCGATGGGTTTGATTGTGTATTTCA

Function

symbol description
hsd17b10 Predicted to enable oxidoreductase activity. Is expressed in central nervous system; endoderm; head; immature eye; and paraxial mesoderm. Human ortholog(s) of this gene implicated in chromosome Xp11.22 duplication syndrome; pheochromocytoma; and syndromic X-linked intellectual disability type 10. Orthologous to human HSD17B10 (hydroxysteroid 17-beta dehydrogenase 10).

NR:

description
3-hydroxyacyl-CoA dehydrogenase type-2

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K08683 HSD17B10; 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methylbutyryl-CoA dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799769.1 True 1190 mRNA 0.55 6 7590901 7599774

Neighbor

gene id symbol gene type direction distance location
LOC120558801 NA coding downstream 143052 7439183 ~ 7447849 (-)
LOC120558624 NA coding downstream 183223 7375726 ~ 7407678 (-)
LOC120558800 NA coding downstream 231493 7320025 ~ 7359408 (-)
LOC120558623 NA coding downstream 291475 7296566 ~ 7299426 (-)
LOC120558601 NA coding downstream 742532 6846035 ~ 6848369 (-)
fam120c fam120c coding upstream 12713 7612487 ~ 7632545 (-)
LOC120558669 LOC103363413,LOC108230764 coding upstream 74688 7674462 ~ 7707260 (-)
spryd3 LOC100708393,LOC102193977,LOC103366148,LOC102305037,LOC101464627,LOC102799700 coding upstream 178013 7777787 ~ 7844399 (-)
LOC120558974 zbtb39,LOC102796472 coding upstream 290053 7889827 ~ 7898293 (-)
agap2 agap2,LOC102796960,LOC100691413,LOC102307379 coding upstream 300999 7900773 ~ 7943081 (-)
LOC120558662 NA non-coding downstream 82476 7507296 ~ 7508425 (-)
G47817 NA non-coding downstream 89981 7500657 ~ 7500920 (-)
G47759 LOC104951079 non-coding downstream 148708 7441921 ~ 7442193 (-)
G47758 NA non-coding downstream 152037 7438503 ~ 7438864 (-)
G47757 NA non-coding downstream 153083 7437500 ~ 7437818 (-)
G47846 NA non-coding upstream 4193 7603967 ~ 7605303 (-)
G47837 NA non-coding upstream 8117 7607891 ~ 7623479 (-)
G47949 NA non-coding upstream 333175 7932949 ~ 7955256 (-)
G47956 NA non-coding upstream 392095 7991869 ~ 7994732 (-)
G47971 NA non-coding upstream 447525 8047299 ~ 8074235 (-)
G47814 NA other downstream 92099 7485427 ~ 7498802 (-)
LOC120558602 NA other downstream 554526 6955204 ~ 7036375 (-)
G47638 NA other downstream 785195 6804141 ~ 6805706 (-)
G47624 NA other downstream 869172 6696445 ~ 6721729 (-)
G47254 NA other downstream 2857616 4732796 ~ 4733285 (-)
G47934 LOC103363443,LOC106920718,LOC105016959,LOC102211704,LOC108251018 other upstream 172162 7771936 ~ 8187551 (-)
G47937 gpr182,LOC103467901,LOC103130457,LOC106963994 other upstream 215377 7815151 ~ 7886850 (-)
ada ada other upstream 781343 8381117 ~ 8409734 (-)
LOC120559289 LOC106911506,LOC106515592 other upstream 1103191 8702965 ~ 8705483 (-)
LOC120558858 LOC103370645,LOC100704217,LOC102196282,LOC102305949,LOC101463755,LOC102780123 other upstream 1779226 9379000 ~ 9408403 (-)

Expression


Co-expression Network