nol9 (nol9)


Basic Information

Item Value
gene id nol9
gene name nol9
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 9522095 ~ 9535683 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799977.1
TCTACGCGACCGAACTCCGGGAAAAATCTTTGTTGTCCGTTATTAAACATCAACATGCCCACCAGTGACGATAGAATATCTACAAATACAATTATTAAATGTGGCTACAGtactttttgttaatttttatttgtgtgtgtgagcacgCTAAATAAAGAGCAATAGTTTTGCTTAATAACTTAAACGTAAATAATTTAAACTCCGGGTTAAACCATAGTCAACCATCTAGATGCGGCGTCTGTTTGTGGCTCACACATGTACGCTAGCTCGTTAGCACTGCTGTGGTTACAGTTAACCAGCTCGTTGGCTTCACTTTACCAGTTATTAACGCTATCCATTTAATAAAACAATTAAGAGTCATCTCTACAGTTCCGCGTTGTTTTCCACAAGCGGGGGCTCCCCCCTTTTTGTTTTTCGTCGGCTCCCACATGAATAACTGCTGTTCAGAATCATGAAGGTGAAACCCGCACAGGTTAAGGGCCACGCTAAATCTCAGAAATGGAAGGACGTGAGGGGCAAACGGTCCCGGCCTCCCATCAGTTCCTCAGAGCTCAACTCCAGTCCTGTCGTGGCCAGGATGGCGAAGGAGCACCAGGCGTCTGTGAAGAAACAGCCCACCGTCAAGAGGTTGAAGAGTAAGGCAAAGCCTGTCTCCGACTCCAAGAAAAACACCCATCAGCCTGCATTTAAGAAATCTCCCACTCAGGCTAATGGAAGTTCAGCGTTTACAATGGACAACGGTTCAAATGACTCGGTGGACTGGAAGGAGTATTCCCAGTCCATTAATGGGAATGGTTTGGAGACCTCAGGGGACAAGCAAGATGTAAGCCCAAGTAGACTGGAGGGAGAGGCTCTCCATTACTGCGCAGAGAGAGATGATCGACAAAACCATGCAGTACTTGTCATGGAGAAGGATCAGACCCTGTGTTTCCGTGGGAAGTGCTTCTTGACCTGTCTGTATGGTCGGGTGGAAGTGATGGGGTTCACTATTGAAGAGGGCCAGCAGTCCTATCCACTCTTCTCCCCAGCCTCACATTGTCCACTGACCATTAGAGCCCAGGAAAGCTCTGATCACTCGAGAGATGACCGATCGGAGGCTGCGCCCATCCTCCGCAAGTACCTGTCAGCAGCATCGCGGAAAAAGTTGCTAAAACGGATTACGTCAAACTCCTCCATCATCCTACTGGAGCCCATGGAGACGCCGCTGACGCGGTTTCTGTCGAGCTTCACAGATCGCAGTGAATTGTTCAGCCCCCCGGTGAGTGAACTGATGTCAGCTGTTCTTGACACTCCCCTCAATGGTTTGGGTGTGATTCCCCTGGCCAGAGGCGTCGACGGCCTGAAGATGTCAAGCACCTACAGAGATGCTCTTAACATGGTCGTCAGCGCCTGTAGAGGGGACATGGATGGCTGTGCAGTTATCCTTGTATGTGGTACCAAGAATGTGGGCAAGTCGACGTTCATCCGCAGCCTCATCAATACCTTACTAAATCAcactACTGGTGTAGATTATTTGGAAGGGGATCTCGGTCAAACAGAGTTCACTCCCGCTGGTTGCCTTTCTTTGTCGACTGTCAGAGAACCACTTCTGGGTCCTCCTTTCACACATCAGTGCACACCAGAGCACATGATCTACTACGGTCATTCGTCGTGCGAGGCGGACTTAGAACGCTACCTGGAGTCCCTTAAATCCTTGTGGCGTAGACGCTCCCCGAGCCGAGAGACTCCCGTCATTATCAACACCATGGGCTGGGTCAAAGGTTTTGGATTCCAGGTGCTGGTGGACATGATCCGCTTCTTCCCGGTCTCGCACGTGGTCCAGCTCGGTCACAGCGGCATCACCCAGTGTCCCGCCCTCACGCCGGAGTTTCTGAGGACGGCACACGGCTGCCAGACGCACCCGCCTGCCCAGACCGCTCTGGACGAGCTCACGGAGAGCCACAGCCCCCCCCGGAGTTACACTCACCTTATTGTACAATCGGAGTTTCAAGGAGTGGGACGCCAAGGAACAGCGAAACACCAGCGCACCAATGAGCACCGAGAGCTGTCATTGCTGGCTTACCTGAGTCAGCTGCAGTCTCCGGACCCCGGGCCAATCAGACCACTGAACAGCCTCACCCCCTACCAGGTGCCCCACACAGCAGTATCTTTAGGTGTGATCCATTGCGAGGTAGTGCCCAACCACATGTTTTATGCTGCCAATGCCAGTCTGGTGGGACTATGCTGCCTGGGAGAGAAAGTGACAAGCAGGGGGGGCCCAGTCCTGCTGTCGCAGGCTCCCATCTGCCCATGTGTGGGCTTCGGTGTGCTTCGAGGCATCGACATGGCGCGTGGCCTGTACTTTTTGCTGACCCCTGTAGATCCCACCATCCTCCGTAAGGTCAACTGTCTCCTCTTGGGAGCGATATCGCTGCCTTCCTGCATCCTCACATCACAGCCGGGCTTTGAAGGAGAGATGCCCTATGTCACTACAGACTACAGTTTTGATCTCACTGGTGCAGGAAAGCTGCGAGTCTTCAAGGGACTGATGAGACCCAGTCAAATGGGGATGCAGTGACATTTTCTGCGTCGGTTTATTGCCCCTTACCCTTCTCGACTGGTGTCTCGCGCTGAACCAGTCAGCAGTGGCCTTTTGAATGTACAGAACTGAAGTTGAGCCGTATCGCATATTCTGCAGGACGAGATGGCTGCCTTCCTATTGCTGGACTTCTACATATATTTGATAGCGCTGAGAAGGAGTTTGTCTTTTCTGTCACATGGACAATAATGGGCGTTTTCGGACCGGAACACATATCTAATAccccccccttttctttttttttgtttgttcgaACACTGTTTTGAGGGACTTTTACTTCAGAGTAGGTACTCTCCCAGCACAAGAGGAACTTTGAGTGAGGTGAGTGTACAGTGATTGGTGGTCCCTGACGCAAGTGTACGTCAATGATCGGTTGAACACGTGAGCCAATGCAGCACTGGGAACCGCCATTTTGAAccgctagctaactagccagccaCTAAATTAGTAAAATCCAACAACTTAATACTTCATCCACTCTTGTCACAGTGTAGAAAGCGcattgctatcgccagatgagtgacaactttttcggctcattttctgtaaccagCTTAGAATTTAAAAACATGATCCAATTAGCAAACTAGCGTTGGCTAACGAGACAAACTAGGGAATTCCACCTCACTTTAATGCTACACCGGTTACAGTAAAAAGAGCTGAACAGCAGGCTGGTGGCCAGCATAACGGTCCCTCCTCCTCACTCCCCGCTGCTAGGAGACTAACGTTACTTCGCTGGGAGGAGAGCggacactagctagctagctagctagctaactagcctgCTCCAGGGACGGAGCtgcgggggagtgaggcagaggaGGACCGGCTGGCTTACGTCACTTCAGTGTTTCTATTGGCGGTGCAAATGCAAAATTCCTTAAAGGTATGTAGTTCTCGGGGGACCTCCCCTGTAGATATTTCCTCTCATTGAGACCCCAGAACTGTTTGGTTTCGAAAACCTCTATTATCACACTTTTTACTTAATtaaagctcttgtttaacatctcTTCTTTGTATAGATGCATTCCAAAGCTGCAAAAGAATTCAAAAACCTGCCAGATATTAAATGAGAAACAACTTTGGTTCAGACTTGTGGTTTTCTTGCTTTAAAGTGCTAAACCCATCTTGATATTAACTTCAGTCATATAGTCCTAGATCCATATAGAGTGTAGAAGGCAGAGTTAACGAGGCTTCTTTCACACATTTTCTGTGAATCTGAAGccctttttttgtcattgttgtgctttAATACCAGTCAAAggttttacagaaatgtctaTTTTTACTGTTGACTAACTCTGCATTAACTGCTGTACATTTGGTATTGTGTTAAAGGGACACAGAAATGTTCCGGCATTTGTAGGTCATTAAAAACTTTTTGTAAATGCAA
>XM_039799978.1
GCACTTCGACGTTTATTTCCTAGCACATATTTTAAGACACTCCCTTAGCATGGTACGCACCCCACAGCTGCTCGAGACTCACATCTGCAGTATCGATGGAACTGGCTCCCCCCTTTTTGTTTTTCGTCGGCTCCCACATGAATAACTGCTGTTCAGAATCATGAAGGTGAAACCCGCACAGGTTAAGGGCCACGCTAAATCTCAGAAATGGAAGGACGTGAGGGGCAAACGGTCCCGGCCTCCCATCAGTTCCTCAGAGCTCAACTCCAGTCCTGTCGTGGCCAGGATGGCGAAGGAGCACCAGGCGTCTGTGAAGAAACAGCCCACCGTCAAGAGGTTGAAGAGTAAGGCAAAGCCTGTCTCCGACTCCAAGAAAAACACCCATCAGCCTGCATTTAAGAAATCTCCCACTCAGGCTAATGGAAGTTCAGCGTTTACAATGGACAACGGTTCAAATGACTCGGTGGACTGGAAGGAGTATTCCCAGTCCATTAATGGGAATGGTTTGGAGACCTCAGGGGACAAGCAAGATGTAAGCCCAAGTAGACTGGAGGGAGAGGCTCTCCATTACTGCGCAGAGAGAGATGATCGACAAAACCATGCAGTACTTGTCATGGAGAAGGATCAGACCCTGTGTTTCCGTGGGAAGTGCTTCTTGACCTGTCTGTATGGTCGGGTGGAAGTGATGGGGTTCACTATTGAAGAGGGCCAGCAGTCCTATCCACTCTTCTCCCCAGCCTCACATTGTCCACTGACCATTAGAGCCCAGGAAAGCTCTGATCACTCGAGAGATGACCGATCGGAGGCTGCGCCCATCCTCCGCAAGTACCTGTCAGCAGCATCGCGGAAAAAGTTGCTAAAACGGATTACGTCAAACTCCTCCATCATCCTACTGGAGCCCATGGAGACGCCGCTGACGCGGTTTCTGTCGAGCTTCACAGATCGCAGTGAATTGTTCAGCCCCCCGGTGAGTGAACTGATGTCAGCTGTTCTTGACACTCCCCTCAATGGTTTGGGTGTGATTCCCCTGGCCAGAGGCGTCGACGGCCTGAAGATGTCAAGCACCTACAGAGATGCTCTTAACATGGTCGTCAGCGCCTGTAGAGGGGACATGGATGGCTGTGCAGTTATCCTTGTATGTGGTACCAAGAATGTGGGCAAGTCGACGTTCATCCGCAGCCTCATCAATACCTTACTAAATCAcactACTGGTGTAGATTATTTGGAAGGGGATCTCGGTCAAACAGAGTTCACTCCCGCTGGTTGCCTTTCTTTGTCGACTGTCAGAGAACCACTTCTGGGTCCTCCTTTCACACATCAGTGCACACCAGAGCACATGATCTACTACGGTCATTCGTCGTGCGAGGCGGACTTAGAACGCTACCTGGAGTCCCTTAAATCCTTGTGGCGTAGACGCTCCCCGAGCCGAGAGACTCCCGTCATTATCAACACCATGGGCTGGGTCAAAGGTTTTGGATTCCAGGTGCTGGTGGACATGATCCGCTTCTTCCCGGTCTCGCACGTGGTCCAGCTCGGTCACAGCGGCATCACCCAGTGTCCCGCCCTCACGCCGGAGTTTCTGAGGACGGCACACGGCTGCCAGACGCACCCGCCTGCCCAGACCGCTCTGGACGAGCTCACGGAGAGCCACAGCCCCCCCCGGAGTTACACTCACCTTATTGTACAATCGGAGTTTCAAGGAGTGGGACGCCAAGGAACAGCGAAACACCAGCGCACCAATGAGCACCGAGAGCTGTCATTGCTGGCTTACCTGAGTCAGCTGCAGTCTCCGGACCCCGGGCCAATCAGACCACTGAACAGCCTCACCCCCTACCAGGTGCCCCACACAGCAGTATCTTTAGGTGTGATCCATTGCGAGGTAGTGCCCAACCACATGTTTTATGCTGCCAATGCCAGTCTGGTGGGACTATGCTGCCTGGGAGAGAAAGTGACAAGCAGGGGGGGCCCAGTCCTGCTGTCGCAGGCTCCCATCTGCCCATGTGTGGGCTTCGGTGTGCTTCGAGGCATCGACATGGCGCGTGGCCTGTACTTTTTGCTGACCCCTGTAGATCCCACCATCCTCCGTAAGGTCAACTGTCTCCTCTTGGGAGCGATATCGCTGCCTTCCTGCATCCTCACATCACAGCCGGGCTTTGAAGGAGAGATGCCCTATGTCACTACAGACTACAGTTTTGATCTCACTGGTGCAGGAAAGCTGCGAGTCTTCAAGGGACTGATGAGACCCAGTCAAATGGGGATGCAGTGACATTTTCTGCGTCGGTTTATTGCCCCTTACCCTTCTCGACTGGTGTCTCGCGCTGAACCAGTCAGCAGTGGCCTTTTGAATGTACAGAACTGAAGTTGAGCCGTATCGCATATTCTGCAGGACGAGATGGCTGCCTTCCTATTGCTGGACTTCTACATATATTTGATAGCGCTGAGAAGGAGTTTGTCTTTTCTGTCACATGGACAATAATGGGCGTTTTCGGACCGGAACACATATCTAATAccccccccttttctttttttttgtttgttcgaACACTGTTTTGAGGGACTTTTACTTCAGAGTAGGTACTCTCCCAGCACAAGAGGAACTTTGAGTGAGGTGAGTGTACAGTGATTGGTGGTCCCTGACGCAAGTGTACGTCAATGATCGGTTGAACACGTGAGCCAATGCAGCACTGGGAACCGCCATTTTGAAccgctagctaactagccagccaCTAAATTAGTAAAATCCAACAACTTAATACTTCATCCACTCTTGTCACAGTGTAGAAAGCGcattgctatcgccagatgagtgacaactttttcggctcattttctgtaaccagCTTAGAATTTAAAAACATGATCCAATTAGCAAACTAGCGTTGGCTAACGAGACAAACTAGGGAATTCCACCTCACTTTAATGCTACACCGGTTACAGTAAAAAGAGCTGAACAGCAGGCTGGTGGCCAGCATAACGGTCCCTCCTCCTCACTCCCCGCTGCTAGGAGACTAACGTTACTTCGCTGGGAGGAGAGCggacactagctagctagctagctagctaactagcctgCTCCAGGGACGGAGCtgcgggggagtgaggcagaggaGGACCGGCTGGCTTACGTCACTTCAGTGTTTCTATTGGCGGTGCAAATGCAAAATTCCTTAAAGGTATGTAGTTCTCGGGGGACCTCCCCTGTAGATATTTCCTCTCATTGAGACCCCAGAACTGTTTGGTTTCGAAAACCTCTATTATCACACTTTTTACTTAATtaaagctcttgtttaacatctcTTCTTTGTATAGATGCATTCCAAAGCTGCAAAAGAATTCAAAAACCTGCCAGATATTAAATGAGAAACAACTTTGGTTCAGACTTGTGGTTTTCTTGCTTTAAAGTGCTAAACCCATCTTGATATTAACTTCAGTCATATAGTCCTAGATCCATATAGAGTGTAGAAGGCAGAGTTAACGAGGCTTCTTTCACACATTTTCTGTGAATCTGAAGccctttttttgtcattgttgtgctttAATACCAGTCAAAggttttacagaaatgtctaTTTTTACTGTTGACTAACTCTGCATTAACTGCTGTACATTTGGTATTGTGTTAAAGGGACACAGAAATGTTCCGGCATTTGTAGGTCATTAAAAACTTTTTGTAAATGCAA

Function

symbol description
nol9 Predicted to enable polynucleotide 5'-hydroxyl-kinase activity. Acts upstream of or within several processes, including cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); definitive hemopoiesis; and digestive system development. Predicted to be active in nucleus. Is expressed in hematopoietic system; liver; pancreas; and pharyngeal arch 3-7. Orthologous to human NOL9 (nucleolar protein 9).

NR:

description
polynucleotide 5'-hydroxyl-kinase NOL9-like

GO:

id name namespace
GO:0005524 ATP binding molecular_function

KEGG:

id description
K06947 GRC3, NOL9; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799977.1 True 3971 mRNA 0.49 13 9522095 9535432
XM_039799978.1 False 3680 mRNA 0.50 13 9522095 9535683

Neighbor

gene id symbol gene type direction distance location
irx7 LOC103370648 coding downstream 150465 9369961 ~ 9371630 (-)
LOC120559472 LOC104950550,LOC105926880,LOC102779557,LOC106567326,LOC106567306 coding downstream 167465 9312886 ~ 9354630 (-)
cbln4 cbln4,LOC102783801 coding downstream 229957 9287548 ~ 9292138 (-)
bcas1 NA coding downstream 323121 9180687 ~ 9198974 (-)
znf217 NA coding downstream 346881 9168882 ~ 9175214 (-)
klhl21 klhl21 coding upstream 12987 9548670 ~ 9685634 (-)
LOC120558654 LOC103359731 coding upstream 251682 9787365 ~ 9881696 (-)
LOC120558325 NA coding upstream 354872 9890555 ~ 9901658 (-)
ints11 cpsf3l coding upstream 368625 9904308 ~ 9916135 (-)
zgc:193690 LOC104936306,LOC102788238,LOC100707688,LOC102213016,LOC101470444,LOC102313919 coding upstream 389494 9925177 ~ 9933192 (-)
G48311 NA non-coding downstream 236843 9284917 ~ 9285252 (-)
G48306 NA non-coding downstream 239573 9282296 ~ 9282522 (-)
G48285 NA non-coding downstream 309270 9210924 ~ 9212825 (-)
G48255 NA non-coding downstream 433352 9077075 ~ 9088743 (-)
LOC120558360 NA non-coding downstream 775583 8743335 ~ 8746512 (-)
G48430 NA non-coding upstream 29281 9564964 ~ 9565214 (-)
G48436 NA non-coding upstream 225207 9760890 ~ 9762449 (-)
LOC120558310 NA non-coding upstream 228385 9764068 ~ 9766189 (-)
G48479 NA non-coding upstream 357285 9892968 ~ 9893826 (-)
G48477 cptp non-coding upstream 380895 9916578 ~ 9918879 (-)
plekhg5b plekhg5 other downstream 2640 9427206 ~ 9519455 (-)
LOC120558858 LOC103370645,LOC100704217,LOC102196282,LOC102305949,LOC101463755,LOC102780123 other downstream 113692 9379000 ~ 9408403 (-)
LOC120559289 LOC106911506,LOC106515592 other downstream 816612 8702965 ~ 8705483 (-)
ada ada other downstream 1112361 8381117 ~ 8409734 (-)
G47934 LOC103363443,LOC106920718,LOC105016959,LOC102211704,LOC108251018 other downstream 1334544 7771936 ~ 8187551 (-)
olfml3a LOC103359736,LOC104967461,LOC102308353,LOC101465779,LOC102785892 other upstream 154046 9689729 ~ 9724134 (-)
c1qtnf12 fam132a other upstream 192191 9727874 ~ 9753686 (-)
hipk1a LOC103359735 other upstream 230628 9766311 ~ 9785241 (-)
G48523 NA other upstream 489311 10024994 ~ 10025825 (-)
G48697 NA other upstream 1105722 10641405 ~ 10733887 (-)

Expression


Co-expression Network