klhl21 (klhl21)


Basic Information

Item Value
gene id klhl21
gene name klhl21
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 9548670 ~ 9685634 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799980.1
GCACAAGCGAGCTCTTTATCTTAAACACAGTAAGAAGCTGGAGCTCAAATGTACTGAGTCACGCTGAGATTCACTAGATTCTTCTAGACTGTTGTACGAAACGTGCCTGGAGGTGCTCATCAGACGAAAACATCATTCTGACCACAACCACCAGAAACTGAGACACCCAGAGGAGAGATGGAAAAGCCAGTCTTGCAGACACAGCCGTCCACCCTGCCTTTCTTCGACACGGCCCATGCCTTCAACCTGCTGCGGGGGATCCATGAACTCCGCGCCGAGCGCAAGTTTTTCGATGTGACTTTGTGCGCCGAGGGCCGCGAGTTCCACTGTCACCGCACAGTGTTGGCCGCTGCCAGCACATACTTCCGGGCGATGTTCGCAGGAACTTTGAGGGAGAGCGTTATGGACCGAGTAGTTCTACACGAGGTGTCAGCCGAGCTTTTGGGCCTGCTGGTGGACTTCTGCTACACCGGACGGGTCACCGTCACCCAGGAGAATGTGGACGTGCTACTGAAGACGGCCGATCTGTTTCAGTTCCCCTCCGTCAAAGAGGCCTGCTGTGCTTTCCTGGAGCAGCGGCTGGACGTTTCCAACTGCTTagagatccaggactttgccgaGGCCTACGCTTGCCGCGAGCTGGCGACCAGCGCTCGCCGCTTTGTCCTCAAAAACATAATGGAGCTGGCCAAAGCGAAGGACTTTGAGCGGTTGCCGTGGAAGCGCCTCTTTGAGTTTCTGTCAGATGACGAGCTTTGCGTGGACAAAGAGGAGGTAGTTTATCAGATCGCCGTGCGCTGGGTGAAGGCTGACCTCAAGCGAAGGCTGCACTACTGGCCCGAGCTCCTACAGCAGGTGCGACTCCCCTTTGTCCGGAGGTTCTTTCTGTTGGCCCACGTGGAGAGCGACCCGCTCGTCTACCTGTCGCCCACCTGCCTCCGCATGGTGAACGAGGCCCGGAGCTTCCAGTCCTGCGAGTACGACCGCCACGACAGGCCCTGCCACCGAATGCGGCCGCGGCCGTCCACGGGGCTGGCAGAGATCCTGGTGGTGGTAGGAGGCTGCGACCAGGACTGCGATGAGCTGGTCACAGTGGACTGTTACAACCCCCAGACCGGACAGTGGCGCTACCTGGCCGAGTTCCCCGACCACCTCGGAGGGGGCTACAGCATAGCTGCCCTCGGAAACGACATGTATGTCACAGGTGGCTCCGATGGCTCTCGCCTCTACGACGGCGTGTGGCGCTACAAGTCGAGCGTTAACGAGTGGACCGAGGCGGCGCCCATGCTGAAGGCCCGCGAGTACCACAGCTCTAGTGTGCTGAAAGGTCAGCTCTATGTGGTGGCATCGGACAGCACGGAGCGCTACGATCACGCTCTGGACTGCTGGGAGGCCTTACCGCCCATGCTGCACGCCATGGACAACTGCTCGGTCACCACGTGCAGCGGACGCCTGTACGCCATAGGCTCCCTGACCGGGGAGGACACCATGGCCATCCAGAGCTACGATGCAGACTCCAACCGCTGGGCCATGGTCAGCTGTGGACAGCTGCCGCCGTGGTCCTTCACACCCAAAACTGTGACCCTCAAAAGCCTCATCTACTTCATCAGGGATGACTCGGCCGAGGTGGATGTTTATAATCCTCAAAAGAACGAGTGGGACAAAATCAGTCCGATGACCCAGGTCCACGTTGGAGGCAGTGTGGCGGCCCTGGGCGGTAAATTATATGTGTCTGGTGGTTACGACAACACGTTTGAGCTGTCGGATGTGGTGGAGGCGTACGACCCGACCACCCGCTCCTGGACTCTTGCCGGACGACTGCCTCAGCCCACATTCTGGCACGGCAGCGTCAGCATATTCCGCCAGTTCATGCCGCAGGTGTCCAGCGCATTCGAACCCGCCGACATACCCGAGTCAAACGCCATCCACCTGCACCGGCACCAGCGCCCGCACGCGCTCCACAACCTCAACAACAATCCCATCCAAAACCAGAACCAGGATGTGAACCCAGCACACTGAGTTTGGGCCCAGAAACCCATGTTGACATTTTCAGTGTGTTCTCCCTCATTGTCAGCAGTCTGTTGGCTGGCTGAGTTCCAAAAAAGACCTGGTGTTTCTTAGCCCCGTTTCGTCTCACTGCGTGGGAGCCCGTCCCGGATGGATAGAAAAGTTTAGGGAAGCCACTGCCTTCAAGTCAAAAGTGGGGGAATTTAACCAAACCAAACCGTTAAGTGTTCATTCACACTAGATAGTCGGTCCGGCAATTCGCCGCGGGAATGTGCGGTTGTGGGATATAACTTAAaaggcccatttgtgtgacatcctgttgtgttctttaacacTCCCCACCCAATGTAGCACGAGTAGACTTTAAATTTCACAATGTTGGTTTTCCACCAGATTACTTATAGGTCTTGACATTGCCGACCGTACTTGAAGGCAGCTTATTtcagggagaaagaaaagagactgaGGAACTGTGCTTTGTGCTGGAGCTCGTtgcaggaaacagtcagctgttacacCAACTCCTGGGCACATaagtgcttgtgttttgtttttaaccttCATAGGGTTTTCCCTGGGTTTTTAAAGCACTATGGTGCAAATGACTGCATACActcatttgcatattggtgACGTCATCTTGCAATTATTTGCATAAAGCTTGGTGATTGTCGGTTGCAGCAAGTGATACATCACCAAACAAAAAGCTAAACTTGGAGGtgcctttttatatatataataacagtTCCCATTTTGAGACTTGTTGACTCAAAAAGCAGAAATAGTTGATGTGTGAAGAATCAAAAAAtagggcgagagagagaggacagacccTGGCTCTTTTCTCACCTCTACAAATCTGAACAGCCACGGCCTGAAGCGAGTGTGAATGTCAGATTGTCGGTTACAGAAATTCTGGGAAGCATACTGGCAGCCTCATCCTAAAGGTCTTTTCTCCTGTAATACCAAAAATATACTCAATATACAACACTTTCAATGAA
>XM_039799981.1
AAGGCAACATTCATTAGAGTTGAGGGTATCATGGCGCAGAAGAGGCCGAAGAGATCCGCAGCATCAAACTTTAATTTCAGCTCGATAATACGGCGTTAACTCGTTACACTCTTTAAAATTATTAACATCCGGCAAAGACAAATACTGACGAAAACATCATTCTGACCACAACCACCAGAAACTGAGACACCCAGAGGAGAGATGGAAAAGCCAGTCTTGCAGACACAGCCGTCCACCCTGCCTTTCTTCGACACGGCCCATGCCTTCAACCTGCTGCGGGGGATCCATGAACTCCGCGCCGAGCGCAAGTTTTTCGATGTGACTTTGTGCGCCGAGGGCCGCGAGTTCCACTGTCACCGCACAGTGTTGGCCGCTGCCAGCACATACTTCCGGGCGATGTTCGCAGGAACTTTGAGGGAGAGCGTTATGGACCGAGTAGTTCTACACGAGGTGTCAGCCGAGCTTTTGGGCCTGCTGGTGGACTTCTGCTACACCGGACGGGTCACCGTCACCCAGGAGAATGTGGACGTGCTACTGAAGACGGCCGATCTGTTTCAGTTCCCCTCCGTCAAAGAGGCCTGCTGTGCTTTCCTGGAGCAGCGGCTGGACGTTTCCAACTGCTTagagatccaggactttgccgaGGCCTACGCTTGCCGCGAGCTGGCGACCAGCGCTCGCCGCTTTGTCCTCAAAAACATAATGGAGCTGGCCAAAGCGAAGGACTTTGAGCGGTTGCCGTGGAAGCGCCTCTTTGAGTTTCTGTCAGATGACGAGCTTTGCGTGGACAAAGAGGAGGTAGTTTATCAGATCGCCGTGCGCTGGGTGAAGGCTGACCTCAAGCGAAGGCTGCACTACTGGCCCGAGCTCCTACAGCAGGTGCGACTCCCCTTTGTCCGGAGGTTCTTTCTGTTGGCCCACGTGGAGAGCGACCCGCTCGTCTACCTGTCGCCCACCTGCCTCCGCATGGTGAACGAGGCCCGGAGCTTCCAGTCCTGCGAGTACGACCGCCACGACAGGCCCTGCCACCGAATGCGGCCGCGGCCGTCCACGGGGCTGGCAGAGATCCTGGTGGTGGTAGGAGGCTGCGACCAGGACTGCGATGAGCTGGTCACAGTGGACTGTTACAACCCCCAGACCGGACAGTGGCGCTACCTGGCCGAGTTCCCCGACCACCTCGGAGGGGGCTACAGCATAGCTGCCCTCGGAAACGACATGTATGTCACAGGTGGCTCCGATGGCTCTCGCCTCTACGACGGCGTGTGGCGCTACAAGTCGAGCGTTAACGAGTGGACCGAGGCGGCGCCCATGCTGAAGGCCCGCGAGTACCACAGCTCTAGTGTGCTGAAAGGTCAGCTCTATGTGGTGGCATCGGACAGCACGGAGCGCTACGATCACGCTCTGGACTGCTGGGAGGCCTTACCGCCCATGCTGCACGCCATGGACAACTGCTCGGTCACCACGTGCAGCGGACGCCTGTACGCCATAGGCTCCCTGACCGGGGAGGACACCATGGCCATCCAGAGCTACGATGCAGACTCCAACCGCTGGGCCATGGTCAGCTGTGGACAGCTGCCGCCGTGGTCCTTCACACCCAAAACTGTGACCCTCAAAAGCCTCATCTACTTCATCAGGGATGACTCGGCCGAGGTGGATGTTTATAATCCTCAAAAGAACGAGTGGGACAAAATCAGTCCGATGACCCAGGTCCACGTTGGAGGCAGTGTGGCGGCCCTGGGCGGTAAATTATATGTGTCTGGTGGTTACGACAACACGTTTGAGCTGTCGGATGTGGTGGAGGCGTACGACCCGACCACCCGCTCCTGGACTCTTGCCGGACGACTGCCTCAGCCCACATTCTGGCACGGCAGCGTCAGCATATTCCGCCAGTTCATGCCGCAGGTGTCCAGCGCATTCGAACCCGCCGACATACCCGAGTCAAACGCCATCCACCTGCACCGGCACCAGCGCCCGCACGCGCTCCACAACCTCAACAACAATCCCATCCAAAACCAGAACCAGGATGTGAACCCAGCACACTGAGTTTGGGCCCAGAAACCCATGTTGACATTTTCAGTGTGTTCTCCCTCATTGTCAGCAGTCTGTTGGCTGGCTGAGTTCCAAAAAAGACCTGGTGTTTCTTAGCCCCGTTTCGTCTCACTGCGTGGGAGCCCGTCCCGGATGGATAGAAAAGTTTAGGGAAGCCACTGCCTTCAAGTCAAAAGTGGGGGAATTTAACCAAACCAAACCGTTAAGTGTTCATTCACACTAGATAGTCGGTCCGGCAATTCGCCGCGGGAATGTGCGGTTGTGGGATATAACTTAAaaggcccatttgtgtgacatcctgttgtgttctttaacacTCCCCACCCAATGTAGCACGAGTAGACTTTAAATTTCACAATGTTGGTTTTCCACCAGATTACTTATAGGTCTTGACATTGCCGACCGTACTTGAAGGCAGCTTATTtcagggagaaagaaaagagactgaGGAACTGTGCTTTGTGCTGGAGCTCGTtgcaggaaacagtcagctgttacacCAACTCCTGGGCACATaagtgcttgtgttttgtttttaaccttCATAGGGTTTTCCCTGGGTTTTTAAAGCACTATGGTGCAAATGACTGCATACActcatttgcatattggtgACGTCATCTTGCAATTATTTGCATAAAGCTTGGTGATTGTCGGTTGCAGCAAGTGATACATCACCAAACAAAAAGCTAAACTTGGAGGtgcctttttatatatataataacagtTCCCATTTTGAGACTTGTTGACTCAAAAAGCAGAAATAGTTGATGTGTGAAGAATCAAAAAAtagggcgagagagagaggacagacccTGGCTCTTTTCTCACCTCTACAAATCTGAACAGCCACGGCCTGAAGCGAGTGTGAATGTCAGATTGTCGGTTACAGAAATTCTGGGAAGCATACTGGCAGCCTCATCCTAAAGGTCTTTTCTCCTGTAATACCAAAAATATACTCAATATACAACACTTTCAATGAA
>XM_039799982.1
TGGGCTTATAAATTGAACCacggtttatttatttttatagcatAGCCTGTGTTTAGCTACATTATGGACAGTTTGCACCATTAAAAGTatgccgaattagctgttagcagtTCTTGTCTGCAATTTATTCATGGACGACAACTATCACTAGATACTTTGATATTGAGGAAAACTTAAAAACGGGATGAAGTTCTGGATTTATTTTTGGATTTTCTACATGGTTAATGGACGTTAACGGGCCATGGACATCGGAGATAAAGAGGTCTTCAGAAACACTGGAAGCTACGTTAAGCTACTCTTGGACTGAGGGCCTGCACCAGTCTGTGTTGTGCTGTTTGGACAAACCACAAATGACAAAACCTGAACAAGGAGTCTCTGAAGACCACTGCTTGGGCTAGCCGCTCCGGGCCTGAGCTTAAGCTAGCCACTGATGCCATCTCAAGACGAAAACATCATTCTGACCACAACCACCAGAAACTGAGACACCCAGAGGAGAGATGGAAAAGCCAGTCTTGCAGACACAGCCGTCCACCCTGCCTTTCTTCGACACGGCCCATGCCTTCAACCTGCTGCGGGGGATCCATGAACTCCGCGCCGAGCGCAAGTTTTTCGATGTGACTTTGTGCGCCGAGGGCCGCGAGTTCCACTGTCACCGCACAGTGTTGGCCGCTGCCAGCACATACTTCCGGGCGATGTTCGCAGGAACTTTGAGGGAGAGCGTTATGGACCGAGTAGTTCTACACGAGGTGTCAGCCGAGCTTTTGGGCCTGCTGGTGGACTTCTGCTACACCGGACGGGTCACCGTCACCCAGGAGAATGTGGACGTGCTACTGAAGACGGCCGATCTGTTTCAGTTCCCCTCCGTCAAAGAGGCCTGCTGTGCTTTCCTGGAGCAGCGGCTGGACGTTTCCAACTGCTTagagatccaggactttgccgaGGCCTACGCTTGCCGCGAGCTGGCGACCAGCGCTCGCCGCTTTGTCCTCAAAAACATAATGGAGCTGGCCAAAGCGAAGGACTTTGAGCGGTTGCCGTGGAAGCGCCTCTTTGAGTTTCTGTCAGATGACGAGCTTTGCGTGGACAAAGAGGAGGTAGTTTATCAGATCGCCGTGCGCTGGGTGAAGGCTGACCTCAAGCGAAGGCTGCACTACTGGCCCGAGCTCCTACAGCAGGTGCGACTCCCCTTTGTCCGGAGGTTCTTTCTGTTGGCCCACGTGGAGAGCGACCCGCTCGTCTACCTGTCGCCCACCTGCCTCCGCATGGTGAACGAGGCCCGGAGCTTCCAGTCCTGCGAGTACGACCGCCACGACAGGCCCTGCCACCGAATGCGGCCGCGGCCGTCCACGGGGCTGGCAGAGATCCTGGTGGTGGTAGGAGGCTGCGACCAGGACTGCGATGAGCTGGTCACAGTGGACTGTTACAACCCCCAGACCGGACAGTGGCGCTACCTGGCCGAGTTCCCCGACCACCTCGGAGGGGGCTACAGCATAGCTGCCCTCGGAAACGACATGTATGTCACAGGTGGCTCCGATGGCTCTCGCCTCTACGACGGCGTGTGGCGCTACAAGTCGAGCGTTAACGAGTGGACCGAGGCGGCGCCCATGCTGAAGGCCCGCGAGTACCACAGCTCTAGTGTGCTGAAAGGTCAGCTCTATGTGGTGGCATCGGACAGCACGGAGCGCTACGATCACGCTCTGGACTGCTGGGAGGCCTTACCGCCCATGCTGCACGCCATGGACAACTGCTCGGTCACCACGTGCAGCGGACGCCTGTACGCCATAGGCTCCCTGACCGGGGAGGACACCATGGCCATCCAGAGCTACGATGCAGACTCCAACCGCTGGGCCATGGTCAGCTGTGGACAGCTGCCGCCGTGGTCCTTCACACCCAAAACTGTGACCCTCAAAAGCCTCATCTACTTCATCAGGGATGACTCGGCCGAGGTGGATGTTTATAATCCTCAAAAGAACGAGTGGGACAAAATCAGTCCGATGACCCAGGTCCACGTTGGAGGCAGTGTGGCGGCCCTGGGCGGTAAATTATATGTGTCTGGTGGTTACGACAACACGTTTGAGCTGTCGGATGTGGTGGAGGCGTACGACCCGACCACCCGCTCCTGGACTCTTGCCGGACGACTGCCTCAGCCCACATTCTGGCACGGCAGCGTCAGCATATTCCGCCAGTTCATGCCGCAGGTGTCCAGCGCATTCGAACCCGCCGACATACCCGAGTCAAACGCCATCCACCTGCACCGGCACCAGCGCCCGCACGCGCTCCACAACCTCAACAACAATCCCATCCAAAACCAGAACCAGGATGTGAACCCAGCACACTGAGTTTGGGCCCAGAAACCCATGTTGACATTTTCAGTGTGTTCTCCCTCATTGTCAGCAGTCTGTTGGCTGGCTGAGTTCCAAAAAAGACCTGGTGTTTCTTAGCCCCGTTTCGTCTCACTGCGTGGGAGCCCGTCCCGGATGGATAGAAAAGTTTAGGGAAGCCACTGCCTTCAAGTCAAAAGTGGGGGAATTTAACCAAACCAAACCGTTAAGTGTTCATTCACACTAGATAGTCGGTCCGGCAATTCGCCGCGGGAATGTGCGGTTGTGGGATATAACTTAAaaggcccatttgtgtgacatcctgttgtgttctttaacacTCCCCACCCAATGTAGCACGAGTAGACTTTAAATTTCACAATGTTGGTTTTCCACCAGATTACTTATAGGTCTTGACATTGCCGACCGTACTTGAAGGCAGCTTATTtcagggagaaagaaaagagactgaGGAACTGTGCTTTGTGCTGGAGCTCGTtgcaggaaacagtcagctgttacacCAACTCCTGGGCACATaagtgcttgtgttttgtttttaaccttCATAGGGTTTTCCCTGGGTTTTTAAAGCACTATGGTGCAAATGACTGCATACActcatttgcatattggtgACGTCATCTTGCAATTATTTGCATAAAGCTTGGTGATTGTCGGTTGCAGCAAGTGATACATCACCAAACAAAAAGCTAAACTTGGAGGtgcctttttatatatataataacagtTCCCATTTTGAGACTTGTTGACTCAAAAAGCAGAAATAGTTGATGTGTGAAGAATCAAAAAAtagggcgagagagagaggacagacccTGGCTCTTTTCTCACCTCTACAAATCTGAACAGCCACGGCCTGAAGCGAGTGTGAATGTCAGATTGTCGGTTACAGAAATTCTGGGAAGCATACTGGCAGCCTCATCCTAAAGGTCTTTTCTCCTGTAATACCAAAAATATACTCAATATACAACACTTTCAATGAA

Function

symbol description
klhl21 Predicted to contribute to ubiquitin-protein transferase activity. Predicted to be involved in chromosome passenger complex localization to spindle midzone; protein ubiquitination; and regulation of cytokinesis. Predicted to act upstream of or within cell division. Predicted to be located in polar microtubule. Predicted to be part of Cul3-RING ubiquitin ligase complex. Orthologous to human KLHL21 (kelch like family member 21).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K10458 KLHL21; kelch-like protein 21

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799980.1 False 3008 mRNA 0.54 5 9548670 9556423
XM_039799981.1 False 3032 mRNA 0.54 5 9548670 9569582
XM_039799982.1 True 3328 mRNA 0.53 6 9548670 9685634

Neighbor

gene id symbol gene type direction distance location
nol9 nol9 coding downstream 12987 9522095 ~ 9535683 (-)
irx7 LOC103370648 coding downstream 177040 9369961 ~ 9371630 (-)
LOC120559472 LOC104950550,LOC105926880,LOC102779557,LOC106567326,LOC106567306 coding downstream 194040 9312886 ~ 9354630 (-)
cbln4 cbln4,LOC102783801 coding downstream 256532 9287548 ~ 9292138 (-)
bcas1 NA coding downstream 349696 9180687 ~ 9198974 (-)
LOC120558654 LOC103359731 coding upstream 101731 9787365 ~ 9881696 (-)
LOC120558325 NA coding upstream 204921 9890555 ~ 9901658 (-)
ints11 cpsf3l coding upstream 218674 9904308 ~ 9916135 (-)
zgc:193690 LOC104936306,LOC102788238,LOC100707688,LOC102213016,LOC101470444,LOC102313919 coding upstream 239543 9925177 ~ 9933192 (-)
mul1b mul1 coding upstream 292619 9978253 ~ 9985133 (-)
G48311 NA non-coding downstream 263418 9284917 ~ 9285252 (-)
G48306 NA non-coding downstream 266148 9282296 ~ 9282522 (-)
G48285 NA non-coding downstream 335845 9210924 ~ 9212825 (-)
G48255 NA non-coding downstream 459927 9077075 ~ 9088743 (-)
LOC120558360 NA non-coding downstream 802158 8743335 ~ 8746512 (-)
G48436 NA non-coding upstream 75256 9760890 ~ 9762449 (-)
LOC120558310 NA non-coding upstream 78434 9764068 ~ 9766189 (-)
G48479 NA non-coding upstream 207334 9892968 ~ 9893826 (-)
G48477 cptp non-coding upstream 230944 9916578 ~ 9918879 (-)
LOC120558372 NA non-coding upstream 328769 10014403 ~ 10018354 (-)
plekhg5b plekhg5 other downstream 29215 9427206 ~ 9519455 (-)
LOC120558858 LOC103370645,LOC100704217,LOC102196282,LOC102305949,LOC101463755,LOC102780123 other downstream 140267 9379000 ~ 9408403 (-)
LOC120559289 LOC106911506,LOC106515592 other downstream 843187 8702965 ~ 8705483 (-)
ada ada other downstream 1138936 8381117 ~ 8409734 (-)
G47937 gpr182,LOC103467901,LOC103130457,LOC106963994 other downstream 1661820 7815151 ~ 7886850 (-)
olfml3a LOC103359736,LOC104967461,LOC102308353,LOC101465779,LOC102785892 other upstream 4095 9689729 ~ 9724134 (-)
c1qtnf12 fam132a other upstream 42240 9727874 ~ 9753686 (-)
hipk1a LOC103359735 other upstream 80677 9766311 ~ 9785241 (-)
G48523 NA other upstream 339360 10024994 ~ 10025825 (-)
G48697 NA other upstream 955771 10641405 ~ 10733887 (-)

Expression


Co-expression Network