irx7 (LOC103370648)


Basic Information

Item Value
gene id irx7
gene name LOC103370648
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 9369961 ~ 9371630 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800160.1
ACTCGAATAGCTGGGACGCAGGAAAGATGCCCGCATCGCAAACTGGAATTGGCAGCTTTTTCTTGGAGCGGAACCTCAGCATGCCGACTGGATATCATCAGATCCCGCTGCTGGGATGCCCGCCGAGtgtgcaacagcagcagcaggctcaGCATCTGGCTGCGATGGCAGCTGGAATTCCCATAACATACTCAGGACTCCAGGGATACAACTTCATCCCCTACCCACACCACAGGCACATCGCACACATGAACAACGGTTTCGACTTGAAGGCCGTCTCTCCCTACCACCACGCGCTCCTGGCGCGCGGGGGGGCTTTCTACCCCCCCTACCGCCCCGGAGCAGCCGAGGATCCCGGCAGGGTCGCCAAAGTGGCCACCCGAGAGAGCACCGGGGCGCTGAAGGCCTGGCTCAACGAGCACCTGAAGAACCCGTATCCGACCAAGGGCGAGAAGATCATGCTCGCCATCATCACCAAAATGAGCCTGACGCAGGTCTCCACCTGGTTCGCCAACGCACGGCGGCGCCTGAAGAAGGAGAACCGGGTGAGCTGGGCGTGCAAGGGGAAGTCGGACGAGGAGGACGACGAGCAGGAGGGAGAGAGCGACGATGCGGACACGTCCGCGCACACCTGTCACCTGGATGAGCGGGATGAGGAAGAGCGTCAAAGTGACCGCGCAGACAACGATGGGCACGCCGAGAGCGCGTCGGACAGCTCAGCGTCGGTGGAGGCGCGCTTGGAGATGCCAAAGCAGCCAAGCAGCGAGCATGAAGACAGAGAACTTGCACTTGTCAAGAAAGTTGAAAAGAGTGACTCTGATCACACGCTATCCGCTTTGGGGAGTAAAGAGAACATTGCCAGTCAGAAACCCAAAATCTGGTCTTTGGCCGAGACGGCCACTTCAGAAACTGTCAAGAAACCTCTGGACAATATCTACCACCCGGCCGGAAAACTGTGGGCTGAGTGGGCTTCAAGAAACGGACTGTTTGTGCCGTCATGTTACACCACTCATGGAATTGTCTAAGCGGGTATTTAGACACAAATTAAGAGACTTTTCCACATCCTtttgcactttaaaaaaaaaaaacttttcaaacCTCAGGGGTTTTTTATTCCTGAAGTTTGCAGTGAAATTTCAAATCTGTTTTGAGACCAAAGATTAAAACAtgttattgtaaataaatgtagatgtatttttttcatcacCAATATGTAAATTATGTGCCCTCTTTGTCTATTCATGAAGAACTATTTTTGCTTAAATAAAGATCAGCTTCTAGCGAAATCGTGA

Function

NR:

description
PREDICTED: iroquois-class homeodomain protein IRX-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800160.1 True 1292 mRNA 0.52 2 9369961 9371630

Neighbor

gene id symbol gene type direction distance location
LOC120559472 LOC104950550,LOC105926880,LOC102779557,LOC106567326,LOC106567306 coding downstream 15331 9312886 ~ 9354630 (-)
cbln4 cbln4,LOC102783801 coding downstream 77823 9287548 ~ 9292138 (-)
bcas1 NA coding downstream 170987 9180687 ~ 9198974 (-)
znf217 NA coding downstream 194747 9168882 ~ 9175214 (-)
zfp64 zfp64 coding downstream 379650 8985972 ~ 8990311 (-)
nol9 nol9 coding upstream 150465 9522095 ~ 9535683 (-)
klhl21 klhl21 coding upstream 177040 9548670 ~ 9685634 (-)
LOC120558654 LOC103359731 coding upstream 415735 9787365 ~ 9881696 (-)
LOC120558325 NA coding upstream 518925 9890555 ~ 9901658 (-)
ints11 cpsf3l coding upstream 532678 9904308 ~ 9916135 (-)
G48311 NA non-coding downstream 84709 9284917 ~ 9285252 (-)
G48306 NA non-coding downstream 87439 9282296 ~ 9282522 (-)
G48285 NA non-coding downstream 157136 9210924 ~ 9212825 (-)
G48255 NA non-coding downstream 281218 9077075 ~ 9088743 (-)
LOC120558360 NA non-coding downstream 623449 8743335 ~ 8746512 (-)
G48430 NA non-coding upstream 193334 9564964 ~ 9565214 (-)
G48436 NA non-coding upstream 389260 9760890 ~ 9762449 (-)
LOC120558310 NA non-coding upstream 392438 9764068 ~ 9766189 (-)
G48479 NA non-coding upstream 521338 9892968 ~ 9893826 (-)
G48477 cptp non-coding upstream 544948 9916578 ~ 9918879 (-)
LOC120559289 LOC106911506,LOC106515592 other downstream 664478 8702965 ~ 8705483 (-)
ada ada other downstream 960227 8381117 ~ 8409734 (-)
G47934 LOC103363443,LOC106920718,LOC105016959,LOC102211704,LOC108251018 other downstream 1182410 7771936 ~ 8187551 (-)
G47937 gpr182,LOC103467901,LOC103130457,LOC106963994 other downstream 1483111 7815151 ~ 7886850 (-)
G47814 NA other downstream 1871159 7485427 ~ 7498802 (-)
LOC120558858 LOC103370645,LOC100704217,LOC102196282,LOC102305949,LOC101463755,LOC102780123 other upstream 7370 9379000 ~ 9408403 (-)
plekhg5b plekhg5 other upstream 55576 9427206 ~ 9519455 (-)
olfml3a LOC103359736,LOC104967461,LOC102308353,LOC101465779,LOC102785892 other upstream 318099 9689729 ~ 9724134 (-)
c1qtnf12 fam132a other upstream 356244 9727874 ~ 9753686 (-)
hipk1a LOC103359735 other upstream 394681 9766311 ~ 9785241 (-)

Expression


Co-expression Network