tktb (LOC104956237,LOC103362814,LOC108235280,LOC101069588)


Basic Information

Item Value
gene id tktb
gene name LOC104956237,LOC103362814,LOC108235280,LOC101069588
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 19651238 ~ 19662853 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800190.1
ctcctcctcctcggttGTACTTGCATCGGGCAGCTAGTAGCGGCGTGGCGCAGCTTTGAACCTACTACCCCGGGAAGCAGTAGTGtgactttaataaaaaaaaaaaacataatttacttTCCAAGGTGACACGGTTCTCAAAAAATAATCCCGAAACCATGACTAGCTACCACAAACCCGATGAGAAAACTCTGCAGGGGCTGAAAGACGTCGCTAACAAGCTCAGGATCAACTCCATCAAGGCGACATGCGCCTCTAACTCTGGTCACCCCACATCATGCTGCAGTGCAGCAGAGCTCATGTCTGTGCTCTTCTTCCACACCATGCGCTATAAAGCAGATGACCCCCGCAACCAGTGTAACGACCGCTTTGTGCTCTCAAAGGGTCATGCTGCACCTGTCCTGTATGCTGCCTGGGCAGAGGCTGGTTTCGTGAAGGAGTCTGATCTGCTCAACCTGCGCAAGATTGACTGTGACCTGGAGGGGCACCCCACACCAAAACTGGCTTTTGTTGATGTGGCTACAGGATCTCTGGGACAGGGTCTTGGGGCTGCCTGTGGGATGGCCTACACTGGCAAACACTTTGACAAATCAGCTTACCGTGTGTATTGCATGATGGGTGATGGAGAGTGTTCAGAGGGCTCTGTGTGGGAGGCCATGGCCTTTGCCTCCTACTACAAGCTGGACAACTTGGTGGCTATCATGGATGTCAACCGGCTCGGTCAGAGTGAGGCCGCACCCCTGAAGCACGACATGGAGACCTACCGCAAGCGCTGTGAAGCTTTTGGATGGAACACGTATGTTGTGGATGGACATGATGTTGAGGAGCTGTGCAAAGCGTTCTGGCAGGCTCAGCAGGTCAAGGACAAACCCACTTGCATTGTAGCCAAAACATTCAAGGGCAAGGGACTCAAAAATATTGAGGATCTTGATAATTGGCATGGAAAGCCTATCCCTAAGGACAGGGTGGATGACATCCTAAAAGACCTCCAGGCTCAGATCCAGGTCCCCAACAAGACTGTGTGCCCTGAACTGCCCAAAGATGACACGGCACCTGCAGACCTTAGCACCATCTCCATGCCTTCACCCCCAGCATTCAAAATGGGAGAAAagATGGCAACAAGGCGTGCATACGGCCTGGCACTGGCCAAGCTGGGCCAGGCAAGCAAGAGAGTGGTGGCCCTCGATGGAGACACCAAAAACTCTACCTTCTCAGAGACCTTCAAGAAAGCCTTCCCTGACCGCTACATTGAGTGCTTCATTGCTGAACAGAACTTGGTGGGAGTGGCCATTGGCTGTGGCACCCGTGACCGCACAGTTGCATTTGCCAGCACGTTTGCTGCCTTCTTCTCTAGAGCCTATGACCAGATCCGCATGGGAGCCATCTCCCAGTCAAATGTCAACCTGGTAGGGTCCCACTGTGGGATCTCCATCGGTGAGGATGGTCCTTCCCAGATGGCCCTAGAGGACTTGGCCATGTTCCGTGCTATCCCAACATGTACTGTGTTTTACCCCAGTGATGCAGTGTCCACAGAGAAAGCCGTTGAGCTGTCAGCCAACACTAAGGGTATCTGTTTCATCCGTACCAGTAGACCAGACAATGAGGTCATCTACTCTCCAGATGAGAAGTTTGAAGTGGGCATAGCTAAGGTGGTGCGCCAGTCGGACAGTGATTGTGTAACAGTGATTGGAGCTGGTGTTACTCTGCATGAGGCCCTTGCTGCTGCTGATATGCTGGCCCTTGAAGGGAAGAAGATCCGTGTGATTGACCCGTTCACTATCAAGCCCCTGGATGCCTCTACCATCATGTCCAGTGCCAGAGCTACAAGGGGACAGATAATCACTGTGGAGGACCACTACAAGGAGGGTGGTCTTGGTGAAGCAGTGCTGTCAGCAGTGGGCAAGGAGCCTGGCATCGTTGTGACCCGGCTTGCAGTGACTGGTGTTCCCCGCAGCGGAAAGTCCCAAGAGCTGCTGGACATCTTCGGCATCAGCGCCAAGCACATTGCTAATGCCGTGCGTCAGACCTTTGCAAATTAAGGAGCATAATTTATCTCTCGCTTGCTGCTCTGTTCAATCTCAAACAACTTGCAGTTACCTGGCATGATCACGTGAAGACCTGTTAACTTTTTGTGCCCAAGTTCCATCTTGTGGCTTtgattaaagcaacactagagaacctTTCCAGTTTTggtcccctacaggttggaagcagaattgtctcattcaaactacagatccgctacccggtctgacaaacttgcatagtgcggttatagccggtaGAGAGCCGCAAAGTGAATGTAAAAGTGCCGTTAACCcggttacgagttgatgaaccactgaaacgattttggaacgGTTATTTTAAGTTACAAAATTCTCTTGTGTTGCTTTAAAGTACTGTGTGCGCTAACCCTGTATTGTTAATACTATCACAGATGGAGAGGGATGAGAAGGGAGTGTGTGACAGATGTAATAATGTTTATTACCACTAAGTCCCAGCAAAAAGTAATGTGTAGTAGCCTACCAGTAAGTCGGAGCAAGCAATTGAGTAACTGTTGAGGGTTCATATTGAGTAATGGTATATCGGTTTATGGTTAATGTTGTTACAGTATGTTTGATTTCTTGTTTTTCACGTGCAAAATGTCATTCCAACACCAGCAGCAGTAAGGGTTAACCAGAGCGTTGTATTTACTAGAGGGCTCCATCAGGGGGAACGTAAAACTCTTGAGCTATCTGTTGCAGTGCATGTCCCCTTCActcagctaaaagttacatagtgttgctttaacactTACTGCTGCTGGTGTTGGAATGACATTTTGCACATGAAAAATAAGAAATCACAAATGTACTGTAACAACTTTAACCATAAACTGATGCCATGAAAATGCCAAAATTACTCAATATGAACCCTCAACTGCTTGCTCTGACTTACTGGTAGGCTACTACACATTACTTTTGCCTAACTTACTGGTAATACACATTATTCCATCGGTCACAAGTAGAGTGTTGTCGACTCCTGTAGTGTTAATATTACTCTCCCGGTTTGCAGTGTCTAGTACCCTCTTCTGCAGCATTCCTTTCTTTTATCATGTTTTCCAAATTCCTTGCTAGTAGTTCAAACAAAAGCCTCACAGAATACTGTAAATGTGGTATGTTGACAGCTTACCATACCAGCTGTATGGTAAGCTGTCCTGGTTCTGATCCATTTTGAACTGTCAGGCCACAACTTTTGTTCTGCATTCCAACAATCCTTTCTTTTTCACATTCCTTACAACCATGCCTCATGTCTTCTCACTCAGCTGGCACTCATGcctccttttttgttttgaagAAGCACTATTACTGTTGTCATACATGTATGTACTATCAGTTTTGTAGTGATCAGTCCCAGCTTTGACGCTTGGCTGTGGTAGAGAACAGTTTCTTCAGATGGTGTGAAAAGTTAAACCTCTTAGTTGTGAACCGTTGAGCATTCCTGGCCACAATGGCATCACACAATGTTACTGCTTTCCAGGTCACTGGTGTCATCCTGTTCTACCTGTGTTGTGCTGAATTAAAAAGATTAACCCAA

Function

NR:

description
PREDICTED: transketolase-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K00615 E2.2.1.1, tktA, tktB; transketolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800190.1 True 3579 mRNA 0.48 14 19651238 19662853

Neighbor

gene id symbol gene type direction distance location
si:dkey-32e6.6 LOC104956310 coding downstream 1861 19637014 ~ 19649377 (-)
bgnb bgn coding downstream 19215 19615646 ~ 19632023 (-)
b4galt3 LOC103362816,LOC104933217,LOC104966142 coding downstream 36641 19604756 ~ 19614597 (-)
atp6ap1lb LOC104933206,LOC103362820,LOC100695140,LOC101467308 coding downstream 49169 19588284 ~ 19602069 (-)
cacna2d3a LOC103362818,LOC101467919 coding downstream 75664 19438628 ~ 19575574 (-)
lrrc23 lrrc23 coding upstream 519 19663372 ~ 19667912 (-)
rbm10 LOC104956217 coding upstream 5243 19668096 ~ 19679320 (-)
LOC120558915 LOC103362809,LOC100696538,LOC104956202,LOC102311006,LOC102199655 coding upstream 16638 19679491 ~ 19683947 (-)
usp21 LOC104956301,LOC100694066,LOC103362808 coding upstream 21194 19684047 ~ 19689360 (-)
arhgef3l LOC102798503,LOC102311840,LOC101488135,LOC100693794 coding upstream 26698 19689551 ~ 19697541 (-)
G51236 NA non-coding downstream 53730 19595594 ~ 19597508 (-)
G51228 lrtm1,LOC102799284 non-coding downstream 191833 19456652 ~ 19459405 (-)
G51147 NA non-coding downstream 236043 19327652 ~ 19415195 (-)
G51122 apeh,LOC103467450 non-coding downstream 423333 19227321 ~ 19227905 (-)
G51088 NA non-coding downstream 722403 18922863 ~ 18928835 (-)
G51266 NA non-coding upstream 162558 19825411 ~ 19850660 (-)
G51468 NA non-coding upstream 400255 20063108 ~ 20063536 (-)
G51467 NA non-coding upstream 403009 20065862 ~ 20073593 (-)
G51518 NA non-coding upstream 636198 20299051 ~ 20300666 (-)
LOC120558923 NA non-coding upstream 705133 20367986 ~ 20382875 (-)
kcnd3 kcnd3,LOC102776651,LOC102303593,LOC100697611,LOC101470631 other downstream 573457 18945968 ~ 19077781 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other downstream 764343 18874755 ~ 18886895 (-)
samd10b samd10,LOC107570869 other downstream 1549666 17974293 ~ 18101572 (-)
zbtb46 zbtb46,LOC102795869 other downstream 1756156 17835080 ~ 17895082 (-)
G50712 birc7 other downstream 1961478 17688115 ~ 17689760 (-)
LOC120558911 LOC103362803,LOC100693258 other upstream 136352 19799205 ~ 19815318 (-)
LOC120558386 hoxc10,LOC100690382 other upstream 1157318 20820171 ~ 20952518 (-)
fmnl3 fmnl3 other upstream 1505051 21167904 ~ 21199043 (-)
esyt1a LOC104932417,LOC104956886,LOC103356920 other upstream 1536487 21199340 ~ 21216719 (-)
si:dkey-151g10.3 wnk3 other upstream 2307199 21970052 ~ 22015043 (-)

Expression


Co-expression Network