si:dkey-109j17.5 (LOC102081939,LOC102793824,LOC103374063,LOC101477867,LOC102209747)


Basic Information

Item Value
gene id si:dkey-109j17.5
gene name LOC102081939,LOC102793824,LOC103374063,LOC101477867,LOC102209747
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 20311426 ~ 20316022 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800215.1
CTGGTCCAATTATAATACTGTCTACATGCCTCCATGAAAAACAGCGCACTGCCTCCCCTTCACTTGCGTCCTAACGACGGATGGGAGCGCAGAAACAACGGATGTAGCTTCACGATTATATTATTGATGTTTCGAGACATCCGCAGCAGCCCGTGTAGCCAGATTGTGGCCGATTTCGGACGTGCAAGCGACGCAACTCCTGCTTGGAATTAAATGTCCTTTTGTCTGCGCAACTGGCAACATTTTATGTGTTATCGGGGATTGGGAAGTAAACACGCTGGCCTGCGCTCATGATTAGAGGCGAGGTGAGATTGATACCTCAGACTCACATTGTCCTTGATCGCAAGTTGATTTTACTTCGGAGTAGAGCAACTGTGGGCTCTAATGGCGTCAGTTTCGAAGGTGTCTATTCTGGATTACTTTAATATTGTGTTTGAAGGTGAAAATGGCAAAATCGAGTCCAACTGCAAGGCTTGTGGTACCAGGATCCAGGCGAAGCGAAGTGTCACGTCCAACTTCGTAACGCACCTCAAGCGGAAACACCAGGCTATGTATGATGACTTTGTGAAAAGGAAGGATATGAAGAGAGAGGGTTACTCCTCTGGTTCCCTGCACAGTTTCACCACTAATGGAGGGAACACCCGCTACACTCTCCCCATCAGTACTCGAgtgggaggtggaggaggaggaggaggagttgtTAGAGGAATGGGAACTCTTGAGGGAAGAGTAGGAGGAGGCTCTGGAGGAGGGGTGACCAAGTTTGACAGACATGACCCACGTCAGGTTCTGATCTCTGAGGCTATAGCTAAGATGATTGTGCGTGACCTGCAGCCAGTGTCCATAGTGGAAAATCAAGGTTTCAGAGAGCTGCTTCAGCTCCTGGAACCACGTTACACTCCTGAGCCCCAGCATTACATCCAGAGCCAGCTCCTCCCAGCCTACACCTACCAGGCCCAGCTAGCAACCCGTCAGGCCCTGGCCTCAGCACACGCCCTCAGCCTCAGCCTGGATCTCTGGAGGGGCTTAACTGGAGCCACTTCAGGgtaCCTCGGTGTCACCTGCCATTTTCTCACATCTGATTGGCAGATGCGTTCAGCTCTCCTGGCGTGCCTTCCCCTGACTGGAGGCAGCTCTGGGAATCGCGTGCTTTCAGATTTTGATGAAGTATGTCACTCTCATGGCGTGTCAGGGAGAGCATTTTGTGTGGTTGCGGACCCTTTCCTATCAACAACAACAGTAAAGCCATGTTGTCTCCCTGGTTTCCTGGTTTCACCTACTCTCACTAACGGGCAAGACGAAGAAGATGGAGAAGAGGTGGAAAATGGTAACAATGTGGAGGAAAGGATCAGGAATGGCCATGGTgacggaggagaggaaggagagtgGGAGCATGGTCTGGGTGTTTGTCGAGTGGACTGTTTCTCTCGCTCCCTTCAACAGTGTGTCAGAGAGGGGTTACGCTCCTGTCCACAGGTCACTTCCACACTGGCCAAGGCTGCCTGTTTCTACAACTACGTTACCTCTGTTGTCCCATCTGAGAAACTTAGCCAGGTGTTTGATGGTCCTGGGTTGAGCATGGGGGCACCAGGAAATACCCTTCCTGCAGCAAGAGACTGGGCTGCTCAGCTTAGGGTGCTTCGGCGGCTGCTGGACTCAGTGGAGTTCCTGGAGGAGGTGAGTGGTCCGGGGGAGCTGGCGCTGGGTGGTTCAGAGAGAGCCCTGCTGAGGGAGCTCACTGATACTTTGGAGCCCTTCACTGAGGCCTGGGACATGGTGCAAggggacagacaggcagacatacagacagacaaacatgtGTCCATCAGCCTGGCTCTGCCATGTGTTCTGGGCCTTCGTAAGCATCTCTCTGAGACGTCGACCCCCCACTGCCCCTCTCTTCTGGCAGACCTTAGCCAGGCTGTAGAGCGTCGGCTGGCCCCTGTCCTGGAGGACCCTCTCTACATCACTGCCACCACCCTGGACCCCCAGTTCAAGCTCACTTGGAGCAGCAACCCTGACTGGCATAGACAAGTTCTCATAGAGGAGTTGTCCAAATATTCATCAGCCTCCAGCCCCATAGAGCCCAACACAGACCTACATCCTCAATGCCAGACCCCTCCTGCCCCAGCTCCATCACCAGTCTCCTCGTTTTCCCGGCCCTGTAAGCTGTTCTCTTTCATCAAGCAGAGACCCACAACACAGGCCAAGAGCCTAGAGCAGGAGTTGGCCGTCTACCTACGAGAGGAACCCACAGACGAGGAGGCTTTGCATTACTGGCGGCGTAAAGCAATTGACTTTCCTCTGCTTGCCCAGGTAGCCAAGAGGGCATTTACCATACCTGCTTGTGGTACTGTAGTCGAGAGCATTTTCACTACTGCTGGGCGCTGTCTGCGGCCAGAGAGAGGCCGCGTCTTACCAAAGAACCTTGAGACGCTCATCTACCTCAAAGCAAACTACAGATTACTATGGACTTAAAGCTAGGAGTCAAGCATTTCTTTTACCTAAATAGCAAGAGAAGGCTTTGTACCTGCAGTTATGTTACTTACTTCTTGGATACTGACCTCTGTTCCCTCCTAAGGAAACTGAGCTAGCAACATAACATAGTCCTCATACTACATATCATTTGACGTGAGATGGAATGAATTACCCAGAGTTTCAGAGCCATGGCTCAGTTTCCCTTCTTAAGACAGGTTTTTTTAGACTGCAGTAGTTGTGGATTGCTGTCTCTACCATGTAGCCTGCATAAGGACAATTATAACACATGCTGTGGACCGAGGGGACTAGAAGCAGATCAATACTGAAGCATTTACTTTGACATTATTTTGCCTGGTCAGGGTCTTCAGACAATCGCAAAACCACAAAGCCCCCACTCTCTATCCTCCCAAACCCAAACATAGCTTGTTTGTGTGCACTGACATACCAATGATAACCAAATGGTCGATAATTGCGTTCTGTAGCGTCTGATTTATTCTGTTGTATACAATAACCCTAGAAGTTGTGACTAATTCATTTGATGTTGTTTTTGAAGGAGGGCATCAGCTGCTAAAAAATATGTCATCCATttattcttttttctctctctttttatgtATTCCTTATCACTGGGACATCATAATAAACAAGTTTCACTTCCTATCAGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106573009, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800215.1 True 3143 mRNA 0.50 5 20311426 20316022

Neighbor

gene id symbol gene type direction distance location
apobec2b LOC103374057,LOC106098463,LOC101478792 coding downstream 1960 20306440 ~ 20309466 (-)
csrp1a csrp1,LOC102794587 coding downstream 142535 20158654 ~ 20168891 (-)
phlda3 phlda3,LOC101480121 coding downstream 154067 20155393 ~ 20157359 (-)
tnni1a tnni1,LOC108235179,LOC101156408,LOC103384557 coding downstream 162192 20143922 ~ 20149234 (-)
lad1 NA coding downstream 169345 20134937 ~ 20142081 (-)
ccdc115 NA coding upstream 1170 20317192 ~ 20321532 (-)
trnae-uuc_54 NA coding upstream 4745 20320767 ~ 20320838 (-)
fkbpl NA coding upstream 9429 20325451 ~ 20328339 (-)
LOC120558914 LOC103360972,LOC103385138,LOC106524412,LOC101071942,LOC107092037 coding upstream 93515 20409537 ~ 20431731 (-)
copz1 copz1 coding upstream 414084 20730106 ~ 20740959 (-)
G51518 NA non-coding downstream 10760 20299051 ~ 20300666 (-)
G51467 NA non-coding downstream 237833 20065862 ~ 20073593 (-)
G51468 NA non-coding downstream 247890 20063108 ~ 20063536 (-)
G51266 NA non-coding downstream 460766 19825411 ~ 19850660 (-)
G51236 NA non-coding downstream 713918 19595594 ~ 19597508 (-)
LOC120558923 NA non-coding upstream 51964 20367986 ~ 20382875 (-)
G51544 NA non-coding upstream 125474 20441496 ~ 20441807 (-)
LOC120558476 NA non-coding upstream 346331 20662353 ~ 20663577 (-)
G51574 NA non-coding upstream 406628 20722650 ~ 20722998 (-)
G51577 NA non-coding upstream 409605 20725627 ~ 20725901 (-)
LOC120558911 LOC103362803,LOC100693258 other downstream 496108 19799205 ~ 19815318 (-)
kcnd3 kcnd3,LOC102776651,LOC102303593,LOC100697611,LOC101470631 other downstream 1233645 18945968 ~ 19077781 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other downstream 1424531 18874755 ~ 18886895 (-)
samd10b samd10,LOC107570869 other downstream 2209854 17974293 ~ 18101572 (-)
zbtb46 zbtb46,LOC102795869 other downstream 2416344 17835080 ~ 17895082 (-)
LOC120558386 hoxc10,LOC100690382 other upstream 504149 20820171 ~ 20952518 (-)
fmnl3 fmnl3 other upstream 851882 21167904 ~ 21199043 (-)
esyt1a LOC104932417,LOC104956886,LOC103356920 other upstream 883318 21199340 ~ 21216719 (-)
si:dkey-151g10.3 wnk3 other upstream 1654030 21970052 ~ 22015043 (-)
LOC120559880 LOC104932903,LOC103358260,LOC104967532,LOC107390844 other upstream 1907127 22223149 ~ 22229421 (-)

Expression


Co-expression Network