LOC120558903


Basic Information

Item Value
gene id LOC120558903
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 19984434 ~ 19988995 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800241.1
GCTATGCAGCTGCTTTGTGCCTGTGTACTGCGGTATGCTGCCTCCATCCTTCAAAGGAGTATATTATGTGGACGGGGGTTTCAGCAGCATGCAGCCACTGCCTGTACCCTGCATGCAAACCTTGACGGTGTCTCCATTCTCTGGAGAGACAGACATCTGTCCCGCCGACAAGCCTTGCATGTGGGACATGGTGGTGAGCGGCACCACCTTGAAGGGCAACATGGCTAACAGCTTCAGGATCATTAATGCTCTCTACCCCATGAATTTAGAGACTCTGGAACAAGCCTACCACAGTGGCTACAAGGATGCTGTTCATTTCCTTCTGTGCCGTGATCTTGCCCCATATTTGATGATACACAAAGTATCTCAAGGGCCACATAACTTTCACCAAACTAAAACGTGGATGAATCTGGAGGCCGCCatagaggaagagaaggagatgAAGGTGGAAAAGGAGGCCATTACACTGAAATCTTTCATAACCAAGAGACGCATGCAGACTGGAAGTTCTACGGAGCATGAATTGACCGGAAATCAACCAAGTAAAGAACCTCCTCTCCATTTTGACATGATAAAAAATGTTCTGCTGAGCAACATGGTGACCTATCTGAGCATGTTTGGACTTCCTGCGAAAATCTTATCCTACCTGCTGGTAACTCTTATCCTGTTGTTTCACGCACTACTCCAGAGTAGGCACAGACTGGAGTTGTTGTTCAGACAGGCGTCTGAGTTGGTGTTCTGGGTTTGGCATTGCCAGAAACATTTTGCATTCTTCTTTTTCAACATATGTGTCTGTACcctaaagaaaaacacattagaccGGGTTATCCCCATCATCCTGCTGTTGCAGTGGCTGATTATGGCACCAGATGAGGCTCCACAAGGACAGAGGCACGATACACCGTCTTCTGCCCATTGAGAAGATGTTGGGCATGGGAAATTACAGTATGTAAAGAGAGCCACTGACTGCTCACCAAGCAGAAATTTAAACACTATATGTATAGCTTGTATTTTGTAAAGTTAAGCCTTTTTGACTGCATATTTCCATTGAAGAGAGCAATGAAAAGTCTTGAAACTTTTGTTTGGGGGGGCTTTCTTTTATCTAAGCTGGTTAATTAGTTCTattcttttgtactttttaaactGTATGAATTACTGTAATCAGTAGAGTGCAGACCTCCACTAAGGCTTAGTAGTAATTTTACAGTCAACATTGTACTTGATTTGTTGTTGAATAGTTGCAGTAAATGACGCTAACATCAAattaaaaagcaacaacacaCTTAGCATAACAGAAAAGTTAATTTTATTCACTCATTAAAAGTTTATTCAATAGTgacaaatacagtataaatagaGAATTTCCATGAGCCAAGTGTTCATTGAGCATAACAAATGTTTACTGGGAAGATTTTCTAGGGAAAAAAGTCATGCATGTGTCAATATTGTGTGGCCACTGGCCACAGTAACGTCATCAGGAGATATGCTTGTTTGGAAATTGAAAGCTTGGCACTATCAAAGTGTCTTGCTCTGAAGATCAGTCATTGCATTACATCCTTGGTGGGGGTATAACTGCTAGCTGCATCATGCTTTACAACTATAttattgtaatattgtatgtctAATGAACAGAAATATCAACATTGCTTAATCTCTAAAATATGAATCAAGTGTATAACAGCCTACAGTGAAAACTCACGCACAGCTGATTTGTAGGAAAGATTCATTCATGCTAATTAGTTATCTGAAGTTTGAGTGGAACAtccgaggaaaaaaaaacacttgcagTTTGAGTCAAGTTGAAAGTTTAGCTCCAGGGTGCTTATCTAGAGTGTTCCTAATTTCAATTTCTCATGAGAGGTGGCAAATAGTCCTGTGATGTGCTGTTTGAACACTGCACTCTTTCTCTCCTCGCCCCCTGAGTGAAGACTACCTACTGTTCAGCGGCCTCTGGCATTGGCATCATTCTCGTAATTCAAAAACATGACGCCAATGTTAGGTGTCACTATGTGCTATGACACTTGATGTTGTACTTGCAGAAACACAGACTTCCTTCATCTCCGTTGTAAGTGCTTTTGGAATCATGTGGACTGCAAATTAATAAATTGGACTCCTCTTGTTTGTCttacaatgtattttttttgtgtataaacTATGTGTTGCTGTTAGCTGTTACTATGCTTGCTGCTATAGTTTCAATTTGAGAAACCTCTAAAAATCAATCAAGGCCATCACTAGGCTTAAAATGTTTTAGCAACAGCAGCTATACATTTAGATAACATTTTCTTTCAGGCCTGCAACAACTCATTCTGGCCAAAAAACGTAAGGGTTGATTCTGATATTGGTTTGATGGACAGTCAAACATGTCATGGTTGgggtcggctggctgtgagttttctgttttgtttactaTTCTCTTGTTTGTTTCTCGGTTGGttttctcctctcctgtgttttcctgttttgcctgcctctctctctctctctctgtgtctactCTGCTCTCCCCCTCCCACTGCTGCTGCCAGCTGATAACCTGGTTACCATCCCGTCATCACCGCCTCCAGCTGCACACACCTGCCTCCCATCTACAATTAAGACCAGTATTTCTACCCCGGCTCAACAGACCATCTCCGCTTGATCGTTGCTTCTGTCACGCTGGTGAAACGCAAAGCTACAAATCTCTGAGACCCTCGTTGTTATCTGACCGCTCACTTACctgttgtgtctctctcttcccaGTCACCATCTCCATCCTCTACCGTCATCTCCAGTCAGCTGGCTCCACCACACAGACCCCCTCCCTCGGCACCCTGCTCCAGCCTCTCCTCGCTCCCTCTGCTCTCCAGCCCcagcctctctccctccctcggCTCCTCAGCTACGGCTTCCCCGCGCTCCCTTGAGTCCCCAGCCCCAGTGCCTCTCCCGCAGCTCCCCGGTCACAGCTCCCCTGAATATCTCCACCCTCCAGTCCCTCTAGCCTTCCCTCAGCTGTTTCCCCATTCCCGGCGTCTGCCTCCCCACTTCCCCTTTCTTTTCCCCTCATAAATAAACCTTTTGTCGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800241.1 True 3069 mRNA 0.44 7 19984434 19988995

Neighbor

gene id symbol gene type direction distance location
ngfa ngf,LOC107390964,LOC103362802,LOC104931860 coding downstream 160781 19822643 ~ 19823653 (-)
camkvl LOC104956158 coding downstream 230995 19716768 ~ 19753439 (-)
uba1 uba1 coding downstream 268123 19698028 ~ 19716311 (-)
etv7 LOC102788405 coding upstream 1921 19990916 ~ 19996340 (-)
LOC120558880 lgr6 coding upstream 15207 20004202 ~ 20041438 (-)
tnnt2a tnnt2 coding upstream 131850 20120845 ~ 20134632 (-)
lad1 NA coding upstream 145942 20134937 ~ 20142081 (-)
tnni1a tnni1,LOC108235179,LOC101156408,LOC103384557 coding upstream 154927 20143922 ~ 20149234 (-)
G51266 NA non-coding downstream 133774 19825411 ~ 19850660 (-)
G51236 NA non-coding downstream 386926 19595594 ~ 19597508 (-)
G51228 lrtm1,LOC102799284 non-coding downstream 525029 19456652 ~ 19459405 (-)
G51147 NA non-coding downstream 569239 19327652 ~ 19415195 (-)
G51122 apeh,LOC103467450 non-coding downstream 756529 19227321 ~ 19227905 (-)
G51468 NA non-coding upstream 74113 20063108 ~ 20063536 (-)
G51467 NA non-coding upstream 76867 20065862 ~ 20073593 (-)
G51518 NA non-coding upstream 310056 20299051 ~ 20300666 (-)
LOC120558923 NA non-coding upstream 378991 20367986 ~ 20382875 (-)
G51544 NA non-coding upstream 452501 20441496 ~ 20441807 (-)
LOC120558911 LOC103362803,LOC100693258 other downstream 169116 19799205 ~ 19815318 (-)
kcnd3 kcnd3,LOC102776651,LOC102303593,LOC100697611,LOC101470631 other downstream 906653 18945968 ~ 19077781 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other downstream 1097539 18874755 ~ 18886895 (-)
samd10b samd10,LOC107570869 other downstream 1882862 17974293 ~ 18101572 (-)
zbtb46 zbtb46,LOC102795869 other downstream 2089352 17835080 ~ 17895082 (-)
LOC120558386 hoxc10,LOC100690382 other upstream 831176 20820171 ~ 20952518 (-)
fmnl3 fmnl3 other upstream 1178909 21167904 ~ 21199043 (-)
esyt1a LOC104932417,LOC104956886,LOC103356920 other upstream 1210345 21199340 ~ 21216719 (-)
si:dkey-151g10.3 wnk3 other upstream 1981057 21970052 ~ 22015043 (-)
LOC120559880 LOC104932903,LOC103358260,LOC104967532,LOC107390844 other upstream 2234154 22223149 ~ 22229421 (-)

Expression


Co-expression Network