phlda3 (phlda3,LOC101480121)


Basic Information

Item Value
gene id phlda3
gene name phlda3,LOC101480121
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 20155393 ~ 20157359 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800276.1
TGCTGTAAAATCAGACGAGGATTTCATAAACAGGCCGGATCTCCTCCTGCAGTCATCAGGAGGCGGGGAAGGGCCACAAGGGAGCCGGGCATGTTCAAACATATCCAGGGAGACCAGCTTACTGTACCAACCTCAACGGAGTACGGTCATTGCGCATGCATTAGATTTATACGAAGACTATAGAGAGTTGTTGTATTGGCTATTATTAATGTCATAGCTCAAATTGATACGTTTTCCTGAGGGACGCTTGGCTCCGACACAGTAACAAATAAGATGTAGGCCTATTTAATGGATTAATTTCGAGGCGTAGGCTATCACTGCTGAAGATGACTGTCTGAGTTTCGGTTCAATGTGGCCATGTCTTTCCCGGCTAAAGTGATCCGAGACGGGCTGCTGGAGAAGCGCAGCAGCGGGCTCCTCCAGCTGTGGAAGAAGAAGCGCTGCGTGCTCACAGAGGAAGGGCTGCGCCTGCACAACTGCAAAGGCGGCGGCTCCGAAGCGAAGGAGCTCCGCTTTGAGCGCATGGCCACGGTGGACTGCGTGGAGTACAAGCGAGGGCTGGTGTACTTCACCGTGGTCATGGTTACGGGAAAGGAGATTGACTTTAGGTGTCCGCAGGACGGCACGGCGTGGAACGCGGAGATTGCTCTGTCGTTGGTGCGCCATAAGAACCTGCAGGCCGTGCAAACAGGACGGAACAGACACCTGTCCACAGCACACCTGGGCAGCACTGGGGAGGATGAGGAGCTCTGATCTGGTTAAGCCTTTCAACTTCTTGGGAGTGAGCCAATCAGGGTGGAGAAGGGTAGAGGACACCACATCCATCAGCTTGATTCTGTGGTGCACAGCATGATGGGATGTACAGAGCAGCCATCAGTGAAAATGGATTAAAGGGGAGAGAAGAAGTGTCACAAACACTCATCTTGTCTTTCTACATGAGCTTATTCACGCTAGTCACACAAAGCCAAGGAATCTTATACACTGTAGGTCATCGTGGAGACTGCTGCTTAAATGTCCCATGGCAtgcaaatttcactttatgaggttttttaacattaatatgcgttccctcagcctgcctatggtcccccagtggctagaaatggcgagaggtgtaaaccgagtcctgggtatc

Function

symbol description
phlda3 Predicted to enable phosphatidylinositol phosphate binding activity and phosphatidylinositol-3,4-bisphosphate binding activity. Predicted to be involved in intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator; negative regulation of protein kinase B signaling; and positive regulation of apoptotic process. Predicted to act upstream of or within apoptotic process. Predicted to be located in plasma membrane. Is expressed in blastomere; dorsal aorta; fin bud; and head. Orthologous to human PHLDA3 (pleckstrin homology like domain family A member 3).

NR:

description
PREDICTED: pleckstrin homology-like domain family A member 3

GO: NA

KEGG:

id description
K23793 PHLDA; pleckstrin homology-like domain family A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800276.1 True 1135 mRNA 0.51 2 20155393 20157359

Neighbor

gene id symbol gene type direction distance location
tnni1a tnni1,LOC108235179,LOC101156408,LOC103384557 coding downstream 6159 20143922 ~ 20149234 (-)
lad1 NA coding downstream 13312 20134937 ~ 20142081 (-)
tnnt2a tnnt2 coding downstream 20761 20120845 ~ 20134632 (-)
LOC120558880 lgr6 coding downstream 113955 20004202 ~ 20041438 (-)
etv7 LOC102788405 coding downstream 159053 19990916 ~ 19996340 (-)
csrp1a csrp1,LOC102794587 coding upstream 1295 20158654 ~ 20168891 (-)
apobec2b LOC103374057,LOC106098463,LOC101478792 coding upstream 149081 20306440 ~ 20309466 (-)
si:dkey-109j17.5 LOC102081939,LOC102793824,LOC103374063,LOC101477867,LOC102209747 coding upstream 154067 20311426 ~ 20316022 (-)
ccdc115 NA coding upstream 159833 20317192 ~ 20321532 (-)
trnae-uuc_54 NA coding upstream 163408 20320767 ~ 20320838 (-)
G51467 NA non-coding downstream 81800 20065862 ~ 20073593 (-)
G51468 NA non-coding downstream 91857 20063108 ~ 20063536 (-)
G51266 NA non-coding downstream 304733 19825411 ~ 19850660 (-)
G51236 NA non-coding downstream 557885 19595594 ~ 19597508 (-)
G51228 lrtm1,LOC102799284 non-coding downstream 695988 19456652 ~ 19459405 (-)
G51518 NA non-coding upstream 141692 20299051 ~ 20300666 (-)
LOC120558923 NA non-coding upstream 210627 20367986 ~ 20382875 (-)
G51544 NA non-coding upstream 284137 20441496 ~ 20441807 (-)
LOC120558476 NA non-coding upstream 504994 20662353 ~ 20663577 (-)
G51574 NA non-coding upstream 565291 20722650 ~ 20722998 (-)
LOC120558911 LOC103362803,LOC100693258 other downstream 340075 19799205 ~ 19815318 (-)
kcnd3 kcnd3,LOC102776651,LOC102303593,LOC100697611,LOC101470631 other downstream 1077612 18945968 ~ 19077781 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other downstream 1268498 18874755 ~ 18886895 (-)
samd10b samd10,LOC107570869 other downstream 2053821 17974293 ~ 18101572 (-)
zbtb46 zbtb46,LOC102795869 other downstream 2260311 17835080 ~ 17895082 (-)
LOC120558386 hoxc10,LOC100690382 other upstream 662812 20820171 ~ 20952518 (-)
fmnl3 fmnl3 other upstream 1010545 21167904 ~ 21199043 (-)
esyt1a LOC104932417,LOC104956886,LOC103356920 other upstream 1041981 21199340 ~ 21216719 (-)
si:dkey-151g10.3 wnk3 other upstream 1812693 21970052 ~ 22015043 (-)
LOC120559880 LOC104932903,LOC103358260,LOC104967532,LOC107390844 other upstream 2065790 22223149 ~ 22229421 (-)

Expression


Co-expression Network