LOC120558974 (zbtb39,LOC102796472)


Basic Information

Item Value
gene id LOC120558974
gene name zbtb39,LOC102796472
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 7889827 ~ 7898293 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800389.1
TGCGACGGCCTGTCAGAAGGGTGATCATTTCCTAAGATTTACAGTCCGTGGACGAGCACCGCTCTGCTTTAAAACAAAGAGCAGGTCCGTCACCTACCAGCGTCTTTTAAATGGTTGGACTGTAGCGCACCAGGAGCTGCAGCAGGGATGAGGATCCGGCTGCAGGGTCCCGGCCACGCTGCCAGCCTTCTCGCCGAGCTCAACCGCTGCCGCCAGTTACGCCAGTACTGCGATGTGTTCCTGCAAGTTGGCAACCGCACCTTCGCAGCCCACCGCGCGGTGCTGGCCTGCGCCGGGACGTACTTCCGTAACCTGTTCGCCCGGGCTCCAGCCTCGTCCACCGCCGCCTTCTCTTTGGAGTTCATCTCCCCGGCCAACTTCGAGAAGGTGCTGACGTTCGTCTACACGGGGGACATCTTGACCGACCTCATAGACGTCGGGGTGCTGTACGAGCTGGCTGAGAGGCTGGGCGTCGGTGAACTGGTGAGGGCCTGTCACGCTACCTTCCCCGACCTGCAGGCTTCTGGGTCCGCAAACTGTAAAGCCGGTAGTCCTGAAGACCGCTCCCTGGACTCTAGCatggtctctgctgctgctgctgctgctgcgtccACAGCGGCTGCCGCGGGCGCAGCTTCTGCGTCGTCTGTGTGTTCCTCTGCCGCCTCCTGCTCGTCTCTGTCTTCATCTGCCGCCCCGACCCCTGCCGCCGCTCCCTCGCCCGTCTTCCAAGCCAGAACGGCCAGCGCCGGCTGCGAAGCTCACGCCGGGGCTCTGTCTCTGGAGCTGAAGGCAGAAGACATGCAGTCTCATATCGGCTACGGGCAGACGGCTGCAGCTCAACCGCTACCGGGCGGGCCGATTGACGGCGCGCTGCCTCCGGGGCCCGTGCTCCAGCTGAAGATCGAGCAGggcctggaggaggaggaggaggaggcggcagAGGGCAGCCGCGAGGGCTCAAGAGACACAGATGGACGAGTGGTTTCTGAGAGCACAGGAAGCTCTCTGCCTCAGAGCGTGGACGCCGCACCGCCCGACTCCCTGGCTCCGCTCGGAGAGCAGGCCTGCGACCCAACGGCGTCCGCGGAGGAGCCTGGAGGCGGCCTGCAGGTGGGATCGGTGGAGGGCGGCGTGGTGGACGTCCGGAGGGACGGCAGGCTGGTGTTCGGCGAGGTGGGGGAGGGAGAGAAcatggaggggaggggggccCTGAGAAGGAACGGAGCCACGGAGggagccgaggaggaggaggaggagcggtGGAGACAGCTGGCAGGGGAGGTCATCGAGCTGAGCGACGACGAGAACTTCATGGACGAGGGAGACGAGGAGGACGATGAAGACGACCTTGTGTATGTGGAGAACGGAGAGGGGGGGAACTCCAGCAGCCAGGTGACGGGGAACATGCTGTCATGTAAAGCCTGCGCGGTGCCCCTCCCGGCGGACCCCGCCGCCATCAGGAGACACGCCGAGACCCACCTGACGGAGCTGGGGAACTGCCGAGTGTGCGGGGCCACGTTCCCAGACCGCCCCGCCGCTGTCGCCCACTCCCTCTCCCACGTGGGGGTGGAGCTCTTCACCTGCGACATGTGTCACTTGCAGTTCTGCAGCCAAAACAAACTGCTGCGCCACCACCGCCAGACAGCCGCCACTTACGCCATACCGCAGGTGGCGCTGACCAACGGCAGCCAGGGACTGGAGCTGCAGTGTGCGGTGTGCACCAAGACCCTCAGCAAGGACTTCCAGACGGTCAAAGACCACCTGCTGAGCCACGTGTGTCCCCAGAGCCTGAGCTGTGGCGTGTGCCACCTCCCCCAGCTCTCCCTGTGCTCCCTGCTGTGGCACGCCCTGGCCCACCTCTCGCTGCCCGTCTTCACCTGCCCGCACTGCGCCCGCTGCTTCGTGGAGCGCTCCATGCTGGACCGACACATGATCGCCCACGCCGAGGAGGCGGCGGCCAAGGAGAGGGAACGCTCGGCGCTGAGGGCGTACAGGGTGCGGGCGGACGCAGGCGCGCCGGCCGGAGCGGAGGAGTTGCACTGCTTCCTGTGCCCGCAGACTTTCCGCTCCCCCTCGGCCTTTCAGTACCACCTCAGCCTGCACACCAGCGAGTCCCTGGCCGGGGTCGGGGGCGCCGGGGGCCAGGGCTGGCCGGGCAAACGTAAAGCCGAGTCTCTGGAGTGCCCCCTGTCCGCGTCGTCTCAACGGGAGGTCGGCAGCCTGGTTAAAATGAGCAACCTGGGCGCGGGGCTGGGAATGAGTTTCGGCATGCCGGAGAAGTTCTATCACGGGTCAGTGCACGGCCTGCCCTCTGGGGCGACGAGCAACGGGAGCTCAGGGCAGGACGGGGCAGCCGGCGCGGCGGGCGTCCGCGAGAAATGGTACCGGTGCCGCTACTGCGGCAAACGCTTCGCCCACTCGGGGGAGTTCACCTACCACCTGCGCATTCACACCGGGGAGAAACCCTACCAGTGCAAGGTGTGCCAGCGCTTCTTCAGGGGCCGCTCCACCATGATCTGCCACCTGAAGACGCACGCCGGCGCCCTCATGTACCGCTGCACCGTCTGCGGCCTCTTCTTCTCCACGCTGAAGCTGGTGTCGTCGCACATGGAGCTCCACAAGGACCACCTGCCCCCGGACTTCAACATCGAGCAGACCTTCATGTACAACGACCACTCGAAAGAGCCGCTGCCCGCTGTGGACGCCTGATGTGGTTTTCTCTCCTACGCCTCCTCTGCGTCTGGTTGTCGTGGACCACATACTGCATATACCGGTAGTCGAATAGGGCTGAAACTAACCATTCTTTTCATtagcgtttttctttttttaaattgccgTAAAATGTcgaagtgtttttaaaaaaaatacggTTGTCCACAATTGCTCTAAAGTTAAAGAGCCCCTGTTATACTTCTTTTTCAGcgtcatatttgtactcttggggtctactaaaataggtttacatgctttgatttaaaaaaaaaaaagacaacgtAGAAGTTGTCTGAGCTCTTGGGCCCCgccttcctgaaaagcccagtctgctctgattggtgctTGCGTtctcaatcagtgacatcactaactagggctgggcgatagggagaaaatcaaatatcaggaga

Function

symbol description
zbtb39 Predicted to enable metal ion binding activity.

NR:

description
PREDICTED: zinc finger and BTB domain-containing protein 39

GO: NA

KEGG:

id description
K10511 ZBTB39; zinc finger and BTB domain-containing protein 39

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800389.1 True 3128 mRNA 0.63 4 7889827 7898293

Neighbor

gene id symbol gene type direction distance location
spryd3 LOC100708393,LOC102193977,LOC103366148,LOC102305037,LOC101464627,LOC102799700 coding downstream 45428 7777787 ~ 7844399 (-)
LOC120558669 LOC103363413,LOC108230764 coding downstream 182567 7674462 ~ 7707260 (-)
fam120c fam120c coding downstream 257282 7612487 ~ 7632545 (-)
hsd17b10 hsd17b10 coding downstream 290053 7590901 ~ 7599774 (-)
LOC120558801 NA coding downstream 441978 7439183 ~ 7447849 (-)
agap2 agap2,LOC102796960,LOC100691413,LOC102307379 coding upstream 2480 7900773 ~ 7943081 (-)
nckap5l nckap5l coding upstream 146668 8044961 ~ 8100721 (-)
kansl2 kansl2,LOC102799133 coding upstream 202646 8100939 ~ 8112235 (-)
LOC120559931 NA coding upstream 207768 8106061 ~ 8106195 (-)
ccnt1 ccnt1 coding upstream 215832 8114125 ~ 8120699 (-)
G47837 NA non-coding downstream 266348 7607891 ~ 7623479 (-)
G47846 NA non-coding downstream 284524 7603967 ~ 7605303 (-)
LOC120558662 NA non-coding downstream 381402 7507296 ~ 7508425 (-)
G47817 NA non-coding downstream 388907 7500657 ~ 7500920 (-)
G47759 LOC104951079 non-coding downstream 447634 7441921 ~ 7442193 (-)
G47949 NA non-coding upstream 34656 7932949 ~ 7955256 (-)
G47956 NA non-coding upstream 93576 7991869 ~ 7994732 (-)
G47971 NA non-coding upstream 149006 8047299 ~ 8074235 (-)
G47972 NA non-coding upstream 149529 8047822 ~ 8050421 (-)
G47935 LOC107659949,LOC107714908,LOC106456382,LOC103385300 non-coding upstream 280362 8178655 ~ 8179100 (-)
G47937 gpr182,LOC103467901,LOC103130457,LOC106963994 other downstream 2977 7815151 ~ 7886850 (-)
G47814 NA other downstream 391025 7485427 ~ 7498802 (-)
LOC120558602 NA other downstream 853452 6955204 ~ 7036375 (-)
G47638 NA other downstream 1084121 6804141 ~ 6805706 (-)
G47624 NA other downstream 1168098 6696445 ~ 6721729 (-)
ada ada other upstream 482824 8381117 ~ 8409734 (-)
LOC120559289 LOC106911506,LOC106515592 other upstream 804672 8702965 ~ 8705483 (-)
LOC120558858 LOC103370645,LOC100704217,LOC102196282,LOC102305949,LOC101463755,LOC102780123 other upstream 1480707 9379000 ~ 9408403 (-)
plekhg5b plekhg5 other upstream 1528913 9427206 ~ 9519455 (-)
olfml3a LOC103359736,LOC104967461,LOC102308353,LOC101465779,LOC102785892 other upstream 1791436 9689729 ~ 9724134 (-)

Expression


Co-expression Network