jph2 (jph2,LOC104937215)


Basic Information

Item Value
gene id jph2
gene name jph2,LOC104937215
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 8188068 ~ 8217881 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800409.1
ACAGCAGCGACTGTCAGGAGATAGCTGGGTGGCAGGGACAGGGGGGAAAGGGGCTTTTCTCTGTGGCCACCTGGAAAAAGCCATGTAAGATCAGTGGCTTGTCAAGACAGATATCTAcagaaaacaattccatttAAATAACCCAGTCATCCACGTTTGTAACACAGCATCATCCACCCTGGAGGGAAATCTGTACATTAGACTGAGTGAAGTCGACGACTCCGAGAAGAAGCAactggagtaaaaaaaaagagggcaaAATATAAAGTTTTCTGCAAAGTGTCAAGTGCGCCCCGGAGCTTCATGGACACGCGCAGAAACCCCCAAAGTAACTCCAAAAGAAGAAGCCCCCACAAGTTGAGCACCAAGGATATCTCCAATCAGCTTTGATGTCAGGTGAAGGTGAAGTCAGACTGACGGAGGTTTTATCTTTAGCCAGGTAACGGACTCAACTTAACTTTCTCATCGGGGCGTTATATTGGGCTGAGGGGGAGGCATGAGCGGCGGGCGCTTTGAGTTCGACGACGGCGGAGCTTACTGCGGAGGCTGGGAGGGAGGCAAAGCCCACGGCCATGGCATCTGCACCGGACCCAAAGGCCAGGGCGAGTTCTCCGGCTCCTGGAACTACGGCTTCGAGGTGGTGGGAGTGTACACCTGGCCCAGCGGGAACACCTACGAGGGCTACTGGTCGCAGGGGAAGCGTCACGGCCTGGGAGTAGAATCCAAAGGACACTGGATTTACAAAGGGGAATGGACTCATGGCTTCAAGGGGAGATATGGCATCCGGATCAGTGTTGGCAGTGGAGCCAAGTATGAAGGAACATGGAATAACGGGCTTCAGGATGGATATGGAACGGAGACATACGCTGATGGAGGTACCTTCCAGGGTCAGTTCACAGGTGGGATGCGGCACGGCTATGGGGTCCGGCAGAGCGTCCCTTACGGCATGGCAGCAGTCGTCCGCTCCCCTCTTCGTACCTCCCTGACCTCCCTTCGCAGCGAGCACAGCAACGGCACCGTCTTGCAGCAAGACGTCCCCATGATCACCACCACCAACGCCTCAGGTGAGGAGACACCCGTCGCCACCCCTACCCAGTTGGGACCGTCCCGCGGAGGCTTCGCCCTCACTCTACAGGTGGACCCAGAGGCTGTGAAACCCAAAAAGAAAGGCCTGTTTAACAGGAGCTCCCTGCTGGGTAAGCTAAAGAAGTCCGACTCCAGTACCTCGCTGTCCAGCCAGAAGAGCAAGATCAGCTTCCTGAGGACGGAGTCGGCTCTCAGCTCCAACGCCAGCGACACCAACTCCACCATCAGCATCGGGGACGAGAGCCTGGCCGGAGCCGAGGATTTCCCCCCGGTGGAGGCCGACATTGACGCCACCACCACAGAGGTCTACATGGGCGAGTGGAAGAACGACAAGCGCTCAGGATATGGAATAAGCGAGAGGTCCAGCGGGCTGAAGTACGAGGGTGAGTGGCTGAACAACCAGAGACACGGCTACGGCTGCACCACCTTCGccgagggagggaaggaggagggcAAGTACATGAACAACTTGTTGGTGAAGGCCATGAAGAAGAGGGTGATCCAGCTGAAGGGAACCAAGATCAAGCAGAAGGTGGAGCGGGCGGTGGAGGGCGCTCAGAGGGCTGCAGCCATCGGCAAGCAGAAGGCAGAGATCGCTGCTTCCAGGACGACCCATGCAAAGGCCAAGTCCGATGGGGCTGATCAGGCTGCACAGGCCTCCAACAGTGAGTCCAGCATCGCCAGACTGGTGGCCAAAGAGCTCTCCCCTTCCTTCTACCAGCCAGGTCCTGAGTATCTGAAGAAGAGAGTGTTACTGGAGGTCGGGGAGGGAAGTGAGCACATAGAGACCGTCATGCATGAGCCGCTGCTAGCCGAGGAGGAGCCCCTGCCCACGCCGCCCGAAAGCCCGCTCATGAATGAACTGGACAGCCTCATGCCCGGCTCGTCCCCAGCCCGCACCCCCTCCCCCAGCCCAGGCATCATCAGCAAGGAAGAGCCCAAACTCCTCAGTCCGGGAAGCTGGAACGAAGACAGAAGCATTAAAGGCGGGGGCAGTAAGGGTAGCAGTAAATCCAACAGCAGGCCCAACAGTCGCCCCACTACCCCGTCAACCTCCGCTCCTGCTCCTGCCTCGGCTGCACCCGAAGGCGCGGGGGCCCCCGGCAGTCGTGGCCCCTCTCGCACCCCCAGCCGTCAGAGCATCAAGATAGAGCAGGGCTCGGACCTGGAGATCAAGCCCCTGCAGAAGTTTGACTCAGAGGTGAAAGCTCCGGATGTCACGCCTGCGCCCGCTGCCCCTGATGTCACGCCAGCGTCCACTGCCCCTGTAAGGAATAGCCTCATCTCgccagatgaagaagaagaagaagaagccccGCGCCCCATCTCCAAAGTGTCTTCCAAAGCGGTCACCCCCGAGCCTAAAATCAACGAGGTCAAAACTGAAAGGGCTCCATCAGTCCGCCAACGAGCGCCGTCCGTCTCCGAGAACAAAGTGGAGTCCAGGGAGGTGAGCAGGCCGTCCAGCAAAGCGGAGGCAAAGCCGTTGCCAAAGCGGCAACCCAGCCCAGCTCCGTCCCCGAAACCAAGTCTTGAACCTAAAACGGTACCAAAGCAAGTGGAAGACAAAGCCATTGTTGCCAAACCAGCCCCGAAGGTGGAGCCCAAAGCAGAAGCCAGACTGAAGGCCATGGTGTCGAGCCCAAGTCCCGAGGTGACTGCCGAGTCTTTGGAGCTGGAGGGCCCAAACACCATCATGATCTGCATGGTCATCCTGCTCAACATCGGGCTGGCCATTCTCTTCGTACACATTTTGTCATGAGACATTGTCCACCACCTcagGTCACCGGCGGTGTTGGAGAGAGACAGcctacctcctcctcctcctccttagtTAGGACCAGAGATCAAAGATGACCGCCGAGGAGCCAAAGACGCCTCATACAGACCCCCAGCAGCTCCTCGACAGGTTTTGGCTGGTGGGACTGCGTGAGGCTCTGTGAAGCTCCTCTCTTTCCAGAGGTTTGACAAACTGAAGGACACGAAACCTGATTCGGTACATCTGAATACGACGCCGTTTGTATGTTAAATTCGGGGGCTGGATGGTAGAGCACGTTCTCGGCGCCTACGCTGGGGACGCGGCGCTCGAGAAGTCTCAATTCATCTTTGTCACAAGTGTCGATTAGACAATCTCAGTAGGCAGTTACACTTTGTCAACAAGATATATGTTTGCATAACGAAGGAATGCCGATAACATACGCAGACGGAATATTCTCTCCACTATGCCTTCAACTTGATTGACGAGACACAAATTCAACCGCAGCGTAAGCGCTAAGAGATTTAGGCGTTATAACTGTTCCGgtcattattttaataatctgcGATGTCCAGCGTGTGGTTAAAAAACCTGAATCCTTTATAGTAGGAGTCTGAAATCAAGTAAATACTGTTGAAATGCTGCAAACTGTAAGCCAACGCTAAGTAAATAGCCACTTTATCGTTTTCATCTTGTTCAGTCTCCAAAGAATCTAGAGAGTTACATTTTTGGCTAATAGCGTTTGAGACTGTGGTGTACTACACTGTGAAACTTCCTATTTTCACTGGGATTTAATAATGCATTTATTGTCATTCTGCTGCTTTGGTTTGTGGAGCTGCAAAACAAAATAGAGAAGGAAAATAGGAAGCTTACGAGTGTCACTGTGCTATGTCCCTGGGGCGGTTCTCATAACGGATGCGGTTTAGCACCCAGGTGGTTTTAAAACGAGAGGTGTGTATGTTTTGCGATAGAATGAGCAggcaggggggaaaaaaagcttattTAAAACGATCACTGTATGTTGTAGTCAAGGTTTCTCAATCTACGTATTTGTATTAATGCAACCGTAGCAGCAGGAGGCGGGCTGGGTGGTTTTGCCTGTGAGCTATCCATGTATGTTTCAGTGTAGAAAACTGTCCACTCTTGTTGCACACCGCGTTATATTCAGGGCCTGTTGTGCTTTTGAGCCACATACTTCAAATTTTTTTGTACGCATGAGGGCActttgtgtgttatgtgtctgTATTTTTGTACCGTTCTGAAGTGCACATCTTTTCAGCATTCACCGTATTCTGTTGTAGGATTTTTGTCAGCGGCAAACATACAACCCTAAAAAAGAAATGTCCCCCCCCCAAAAGGAGTCAGATTACCTCGTTATTTTGTGACACAGGGAAACCGATATAAAATGGTTCTTAACTCCAGGTCTTATTTTGAGGACAGCACTCTCCAGATGTGCAGTTTAATATTTCTCTTGTTCTATTTAGCCAGTTAATATGTGGATTTTAAAAAGGACAAAGGAAAAGGTTCTGCCTTTGCAAATGAACACCATACTGGTTGTGCATGGTTTtcatgcaaagaaaaaaaaataaaaaactacaaagttagTTTTAGTAAATCTCTTATTTGGTAATACATTTGAACCCAGTAAGTTTATCTAAATGCATTAACAGACATTTGTCAGATGAACTCAATGTGAGTGCAATAAAACTATTCATATACTGTAATGTAGAAGCAATTCTGTTTTGACTGTTTGAGCAtttaatgaaattaaataaCATTGCTGAATTTCAAAAGGGAAGAAATGCATTTGTTTGTAGCCAAACCTATTCAAAACTGCAAAGCTGAAAATAAAACTTACAATTGTGATTGTGTA

Function

symbol description
jph2 Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be part of junctional membrane complex. Predicted to be active in endoplasmic reticulum membrane; plasma membrane; and sarcoplasmic reticulum. Is expressed in adaxial cell; cardiovascular system; musculature system; and somite. Human ortholog(s) of this gene implicated in hypertrophic cardiomyopathy 17. Orthologous to human JPH2 (junctophilin 2).

NR:

description
PREDICTED: junctophilin-2

GO: NA

KEGG:

id description
K19530 JPH; junctophilin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800409.1 True 4715 mRNA 0.51 6 8188068 8217881

Neighbor

gene id symbol gene type direction distance location
LOC120558991 LOC108255233,LOC108247626,LOC103363443,LOC102224440,LOC102211704,LOC108251018 coding downstream 13076 8172190 ~ 8174992 (-)
LOC120558989 tuba1c,LOC106676044,LOC102211704,LOC103363443,LOC103148207,LOC107557552,LOC108255233 coding downstream 18342 8164469 ~ 8169726 (-)
LOC120558984 sarnp,LOC102800079 coding downstream 57331 8123547 ~ 8130737 (-)
ccnt1 ccnt1 coding downstream 67369 8114125 ~ 8120699 (-)
kansl2 kansl2,LOC102799133 coding downstream 75833 8100939 ~ 8112235 (-)
fitm2 fitm2 coding upstream 34297 8252178 ~ 8255966 (-)
LOC120559283 NA coding upstream 354798 8572679 ~ 8577776 (-)
gdi1 gdi1,LOC105918302,LOC100709395 coding upstream 415174 8633055 ~ 8643551 (-)
taf8 taf8 coding upstream 444595 8662476 ~ 8674082 (-)
g0s2 NA coding upstream 458236 8676117 ~ 8677135 (-)
G47935 LOC107659949,LOC107714908,LOC106456382,LOC103385300 non-coding downstream 8968 8178655 ~ 8179100 (-)
G47971 NA non-coding downstream 113833 8047299 ~ 8074235 (-)
G47972 NA non-coding downstream 137647 8047822 ~ 8050421 (-)
G47956 NA non-coding downstream 193336 7991869 ~ 7994732 (-)
G47949 NA non-coding downstream 232812 7932949 ~ 7955256 (-)
LOC120559498 NA non-coding upstream 64066 8281947 ~ 8296468 (-)
G48010 ttpal non-coding upstream 112236 8330117 ~ 8333521 (-)
G48128 NA non-coding upstream 393817 8611698 ~ 8654319 (-)
G48153 NA non-coding upstream 489659 8707540 ~ 8707965 (-)
LOC120558360 NA non-coding upstream 525454 8743335 ~ 8746512 (-)
G47934 LOC103363443,LOC106920718,LOC105016959,LOC102211704,LOC108251018 other downstream 517 7771936 ~ 8187551 (-)
G47937 gpr182,LOC103467901,LOC103130457,LOC106963994 other downstream 301218 7815151 ~ 7886850 (-)
G47814 NA other downstream 689266 7485427 ~ 7498802 (-)
LOC120558602 NA other downstream 1151693 6955204 ~ 7036375 (-)
G47638 NA other downstream 1382362 6804141 ~ 6805706 (-)
ada ada other upstream 163236 8381117 ~ 8409734 (-)
LOC120559289 LOC106911506,LOC106515592 other upstream 485084 8702965 ~ 8705483 (-)
LOC120558858 LOC103370645,LOC100704217,LOC102196282,LOC102305949,LOC101463755,LOC102780123 other upstream 1161119 9379000 ~ 9408403 (-)
plekhg5b plekhg5 other upstream 1209325 9427206 ~ 9519455 (-)
olfml3a LOC103359736,LOC104967461,LOC102308353,LOC101465779,LOC102785892 other upstream 1471848 9689729 ~ 9724134 (-)

Expression


Co-expression Network