LOC120559002


Basic Information

Item Value
gene id LOC120559002
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 17000401 ~ 17001309 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800425.1
ATGCCTTTATATACACAAATCTTTTCCTCAGCCAATATCATCACCTTTATGATCATCTGGAGGAGGAAATGCAAGCTCTCCAGGTCAAGCACCTTCTACCTGATGGCCATTTCTGTGGCTGACAATCTTGTTTTGATCTTCATTGTGGTTCTTGAGCTTTCTGTTAAGTACCACCAGCAGGAGCCATTTTGGAGTTACGAGCCATGGTGCAGGCTGAGGGACATTTTTAACTACGGAGCATACAACGCCTCGACGTGGCTGGTGGTTGTGTTTACAGTGGAACGTTTTGTTGCTATCCACACGTGgaaaatgaaaactaaaatcTGCACTTTGAGATGTGCAGCATGGACTACAACGGCCGTTTTCTTTTTCAGTCATATTTTTGCCATTCCTTACTACTGGTCTAATGCCGCAGTCTATGCAAACAACCAGACCAGATGTATTTACAAACCAGAGGCCCCAACTCAGTTCATTCACGCCCTGGTTTGGCTTCAAACCCTGCAAACCTACATATTACccttcatcatcatcctcacACTTAACGGGTTGACCCTGCGCCTAATCTCTCTCAGCAATCGGGTTCATATCACAGCTGATTTAACTTCCAGGGTCAATAAAGTCATGCCCCTGCTGCGCTCCAGGACGAGAAAATCTGTAGTGCTTCTGGTGACTGTGTCCATGAGTTTCGTGCTGTTGTCTGTCACCCGTGCTATAACTCAGATCATCCTGCGCACAACTCACATGTACAGTTTGGATCGTAATGATTATAACCTCCAGATAAACATAGCAGCAGACACTGGCACCATGCTGAGCCTGAGCAATGCGGCTGCTAACATGTACCTGTATGTATGCACCCAGTCCAAGTTTCGCCAGGAGTTCTTTGCCTGTGCCAGACAGGTGTCCTTCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800425.1 True 909 mRNA 0.46 1 17000401 17001309

Neighbor

gene id symbol gene type direction distance location
LOC120559259 LOC104927913,LOC103374533,LOC104956322,LOC106571864 coding downstream 28108 16961498 ~ 16972293 (-)
fmodb fmod coding downstream 40720 16954885 ~ 16959681 (-)
LOC120559618 magi1,LOC104927908,LOC103368435,LOC102193390,LOC102291253 coding downstream 84019 16823774 ~ 16916382 (-)
LOC120559825 LOC103362962 coding downstream 210438 16746379 ~ 16789963 (-)
LOC120559488 LOC104953760,LOC102798642,LOC101474932 coding downstream 269748 16725977 ~ 16730653 (-)
pabpc1l LOC104935356,LOC100697848,LOC102784553,LOC102215180,LOC101469158,LOC102298035 coding upstream 78930 17080239 ~ 17098500 (-)
LOC120558578 LOC103467546,LOC102230394,LOC106947997,LOC105927130,LOC103145058,LOC101167287,LOC104935375 coding upstream 97316 17098625 ~ 17104961 (-)
kctd6b kctd6,LOC101466953,LOC104935404,LOC100692855,LOC107097548,LOC103354431 coding upstream 114841 17116150 ~ 17119562 (-)
abhd6b abhd6,LOC103354432 coding upstream 118357 17119666 ~ 17124287 (-)
slmapb LOC103354436,LOC104935421 coding upstream 128973 17130282 ~ 17141944 (-)
G50443 NA non-coding downstream 55429 16944771 ~ 16944972 (-)
G50389 qars non-coding downstream 285653 16714061 ~ 16714748 (-)
G50382 NA non-coding downstream 320725 16666050 ~ 16679676 (-)
G50378 NA non-coding downstream 337356 16660998 ~ 16663045 (-)
G50371 NA non-coding downstream 419419 16580076 ~ 16580982 (-)
G50476 NA non-coding upstream 62509 17063818 ~ 17064746 (-)
G50477 NA non-coding upstream 63688 17064997 ~ 17065274 (-)
G50483 rbm39 non-coding upstream 69813 17071122 ~ 17074733 (-)
G50484 rbm39,LOC103373755 non-coding upstream 73566 17074875 ~ 17079295 (-)
G50548 NA non-coding upstream 146897 17148206 ~ 17150051 (-)
G50217 fgd3,LOC104966710 other downstream 716545 16281044 ~ 16283856 (-)
G49845 naca,LOC107737655,LOC106571941 other downstream 2146584 14845338 ~ 14853817 (-)
map3k12 LOC104930685,LOC103358642 other downstream 2448843 14539788 ~ 14551558 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other downstream 2465796 14532124 ~ 14534605 (-)
LOC120558545 LOC104942567,LOC103358644 other downstream 2567407 14416336 ~ 14432994 (-)
LOC120559328 smim4 other upstream 105525 17106834 ~ 17115047 (-)
G50712 birc7 other upstream 686806 17688115 ~ 17689760 (-)
zbtb46 zbtb46,LOC102795869 other upstream 833771 17835080 ~ 17895082 (-)
samd10b samd10,LOC107570869 other upstream 972984 17974293 ~ 18101572 (-)
LOC120558627 LOC103370864,LOC104963599,LOC101472162 other upstream 1873446 18874755 ~ 18886895 (-)

Expression


Co-expression Network