ptpn22 (LOC106912495,LOC103467961)


Basic Information

Item Value
gene id ptpn22
gene name LOC106912495,LOC103467961
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 10542933 ~ 10566475 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800730.1
GCAATGCATTGTTGTCTTCGTCATGTCAACCAAGGCACACTGGGCAACCTCCTCTCACATGAACTGCACGTCAGCTTCACTGTTCCTTGATGTGCCAGTTGCAATAGAGAAGTGCTCTGTGCGGCAGCAACAGAAGCAGCGCCTACAGCCCTGAAGCCAAGTCTTGGCGACCCTAATCCATGACCCCTGGATATGTGGACCTCTGTGTCCTGACATTGCCTGTGAAAGGTGCCCTATCCCAGGCAGTGTACAGGCAGCCATGGAGCAGCAAGCCCGGATACTGAGGAGCCTTCTGGCCCAGCTGGAGATACAGGAGGCTGTGGACGATGAGGCAGCGCACGGAATTACTGGGGAGTTTGTGAGGTTGAAATGCCAGTCAACCAAGTACCGCACTGACAAGACCTTCCCCACCAAGACAGCAGAAAAGCAGGAGAACATCAAGAAGAACCGCTACAAAGACATTGTTCCCTTTGACCACACCAGAGTAAAGCTCACTCTCACCAAAACTAAAAATGACACGGACTACATCAATGCCAGTTTCATCAAGGGAGCGTCAGGTTCCAAGGCCTACATTGCTACTCAGGGTCCTCTGCCTCACACAGTACTGGACTTCTTGAGGATGCTTTGGGAGTACAACATCAAGGTTGTAGTGATGGCCTGTCGAGAATTTGAGATGGGAAAGAAAAAATGTGAGCGCTACTGGCCACAGAAACAAGAGCAGCCGTTTGTTTGTGAGCTTTTCACAGTTCACTGTgaTTCTGAGGAAAATAAAGGAGATTATCTTACAAGGACTTTAAGGGTGACTTATCGCAACTGTAGCCGAACTTTGAAACAGCTGCACTATTTAAACTGGCCAGATCACGGTGTACCAGACTCCATCCCTCCCATCCTGGACATGTTGCATGAGATGCGTTCCTATCAACCCCATGATGACGTCCCCTTTTGCATCCACTGCAGTGCTGGCTGTGGTAGAACCGGAGTCCTGTGTGTCATTGACTATACCTGGAACCTCCTGAAGACACAGAGGATCACTCCAGATTTCAGTATCTATGACTTAGTTCAAAACATGAGAACCCAGAGGCCCTCGCTGGTTCAAACCAAGGAACAATATGAGTTGGTGTACAGAACCATCAAGTCGCTGTTTGAGAGATATCTGCGGTCCGTGGACGCCCAGACCTGCAGGAATGAGGTGGGAGCGGTCGCGTCAGCTATCACGCCTGACAACGAAAGCGAGCTCTCTGACCTGAGCGAGGAGCTGGATTTGCTTGATGAAGAAAGGGAGGTTTTGCCTCAGTACCACACTCCCTTGCCTTCcgctttagaaaatctaataGACTTCAGAGACGAGGACACGCACGGGGACCAGGAGCAATGGTATCTACTCCGGACCCTTCCTGAGGCTCCGGCCACTGCCCAGAACCAGCAGGAAGGACCCAGGACTTCACCCAAACTGCTGCATGCCAGCCCCAGAGGCCCTCTAGTAGAGGAGACGATACAGGACCCCGATGACAAGCTGTCACGGAACACTCCGCCTTCTCCAGCTGTGGCAGCAGCTATTTGTCTGATGGTAGAGGACCCCTACTTTGACACTCCAATGAGCTCCCCTCCATCAGAGGCACCAATGGACTCTACCGAAGACGCCAAACAATGGACGGATAGCCCCATCTTTAGGACGCCCTCATTGTTTCTGAACGACCAGACTCTGGAGCTTAACTCTCCCGCCTCAGGTACTGAAGTTCATATGGATGAGGAGGTACCTCCTCCCTTACCTCAACGAACGCCTGAATCCTTTATGATGGCTGAGGATGCAGAGCGCTCGGCTCCTTACGAGAGTTTGCTGGTTATCATTCCACCCAACGCTGCTGCCGAGGCTGTCCGGGAGTTGGGAGGCAATCCCCCCTCACCTGTCCCCCCACTTCCCGAGAGAACACCAGAATCATTTGAGCTAGCACTGGATCAAGCTCCCGGGGAGCAGAAGTCAGCGGTCACGCCGGCAGTGAACCGGAACAGAATAGGGATGTCTTCAGAATGGTCCGGGGATTTAAAGCCCAGTGAGACCAAACATTGGTTGAGGAGTAAGAGTCTGAAAGCAAAAATGACCTTCACAGTACCAGAACCACATCCTGATTTTGCATCATATACAACTCCAAACCTCCCCCCTTACTGTCCGCCTTTGGACCCGCTGACCCCTCCGCTGCTTCCTCAAACTGAGGAGAGCCTGACTCCTCCACTTCCTGACAGAACCCCCGAGTCCTTCATCCTCATCACAGAACAAGTTGAGGAGAAAGGCGCCCTCTGCCCGCAGCCATTAGAAACAACCCAGGCCTTACCGAGGGTAGGCTTCTCGTCTGAGTGGGACGGCACCGTTCAGCCAAAGAAATTCCTCGACGTTGTAATGAGCCGGAGCAAGaGCGTTCGAGCTAAAAGTTCCAGAGAAGAGCCCCTTACTGCAGTTCGGCAGCTCGCTCCACTTCCTGTGGTCGTGGCTGGAGGAGGAAGTGAACTAGTGGGGCCGCACGAGGCCAACCACAGGCTCTCCCTGAACACCGACACATCAGGAAACAAATCAGACAAAAGCAACGAGAAGGGCGTGTTGCGGACGAAGAGTCTGAAGTTCTTTAGACACAAACAAAGACCTAAAACCGCCCCTCCACCGCCTCCCACTCAAGCTGAAACTCGGCCTACGTCCAACGGTGCCTCGTCATCAGTGTTCAAATTTGGATTTGGGAACCGTTTTGGAAAGCCCAAAGGGCCCAGGAGTTACCCAGAGACCTGGGTTTAATATTAAGAGGGTCACCGCtctctacataaaaaaaaaaaacggaacgGTGATCAACATAATGCATTGCATAGCTAAAGGACTCGGAGAGTTGGAAGTTTATCCACATACAGTGGACCTAAAAAGCACGGAGTGCCGCTTCTCTTTGTCTCGCACAGCGCAGCAGCACCCTCAGCAGAGCACAGGAAGTGCCTTGTTACCAGCTCTGATGCATTTTGTACAACATATCAACTAAGTTTTGATTATTGATCGGTGCACAGCCACTTGGACCAATGACTTGAATGTTTAATGGAAATCTCCGCCTCGCTGTTAAACTTGGTGGATGAGGAATATATTTAGCGTTTGCGTGCCTTTGTGGTTTtgtatgaaataataaaaaaaaaaaaaacgggtaTAACGTTGCATCCAGCACACCACTTTTTCTATTCCAAAAGACATCAAACTAAACATCACTCAGGGTACCATGcgtgtcatttggttttgtttCCTTGCTGTAACTCACACATCCATCTGTAGGCTTTAAATGATTATAAAACCATCGTCATTTAAATGATCAACATCTTAAAGTGGATGTCTCAGTGAGTGTGATGTATACTGAACATGAATGTGATGGAACTGTACAGTTAGACCGTGTTACAcacaaaattatttattaaaaaatatagaaagtc
>XM_039800731.1
GCAATGCATTGTTGTCTTCGTCATGTCAACCAAGGCACACTGGGCAACCTCCTCTCACATGAACTGCACGTCAGCTTCACTGTTCCTTGATGTGCCAGTTGCAATAGAGAAGTGCTCTGTGCGGCAGCAACAGAAGCAGCGCCTACAGCCCTGAAGCCAAGTCTTGGCGACCCTAATCCATGACCCCTGGATATGTGGACCTCTGTGTCCTGACATTGCCTGTGAAAGGTGCCCTATCCCAGGCAGTGTACAGGCAGCCATGGAGCAGCAAGCCCGGATACTGAGGAGCCTTCTGGCCCAGCTGGAGATACAGGAGGCTGTGGACGATGAGGCAGCGCACGGAATTACTGGGGAGTTTGTGAGGTTGAAATGCCAGTCAACCAAGTACCGCACTGACAAGACCTTCCCCACCAAGACAGCAGAAAAGCAGGAGAACATCAAGAAGAACCGCTACAAAGACATTGTTCCCTTTGACCACACCAGAGTAAAGCTCACTCTCACCAAAACTAAAAATGACACGGACTACATCAATGCCAGTTTCATCAAGGGAGCGTCAGGTTCCAAGGCCTACATTGCTACTCAGGGTCCTCTGCCTCACACAGTACTGGACTTCTTGAGGATGCTTTGGGAGTACAACATCAAGGTTGTAGTGATGGCCTGTCGAGAATTTGAGATGGGAAAGAAAAAATGTGAGCGCTACTGGCCACAGAAACAAGAGCAGCCGTTTGTTTGTGAGCTTTTCACAGTTCACTGTgaTTCTGAGGAAAATAAAGGAGATTATCTTACAAGGACTTTAAGGGTGACTTATCGCAACTGTAGCCGAACTTTGAAACAGCTGCACTATTTAAACTGGCCAGATCACGGTGTACCAGACTCCATCCCTCCCATCCTGGACATGTTGCATGAGATGCGTTCCTATCAACCCCATGATGACGTCCCCTTTTGCATCCACTGCAGTGCTGGCTGTGGTAGAACCGGAGTCCTGTGTGTCATTGACTATACCTGGAACCTCCTGAAGACACAGAGGATCACTCCAGATTTCAGTATCTATGACTTAGTTCAAAACATGAGAACCCAGAGGCCCTCGCTGGTTCAAACCAAGGAACAATATGAGTTGGTGTACAGAACCATCAAGTCGCTGTTTGAGAGATATCTGCGGTCCGTGGACGCCCAGACCTGCAGGAATGAGGTGGGAGCGGTCGCGTCAGCTATCACGCCTGACAACGAAAGCGAGCTCTCTGACCTGAGCGAGGAGCTGGATTTGCTTGATGAAGAAAGGGAGGTTTTGCCTCAGTACCACACTCCCTTGCCTTCcgctttagaaaatctaataGACTTCAGAGACGAGGACACGCACGGGGACCAGGAGCAATGGTATCTACTCCGGACCCTTCCTGAGGCTCCGGCCACTGCCCAGAACCAGCAGGAAGGACCCAGGACTTCACCCAAACTGCTGCATGCCAGCCCCAGAGGCCCTCTAGTAGAGGAGACGATACAGGACCCCGATGACAAGCTGTCACGGAACACTCCGCCTTCTCCAGCTGTGGCAGCAGCTATTTGTCTGATGGTAGAGGACCCCTACTTTGACACTCCAATGAGCTCCCCTCCATCAGAGGCACCAATGGACTCTACCGAAGACGCCAAACAATGGACGGATAGCCCCATCTTTAGGACGCCCTCATTGTTTCTGAACGACCAGACTCTGGAGCTTAACTCTCCCGCCTCAGGTACTGAAGTTCATATGGATGAGGAGGTACCTCCTCCCTTACCTCAACGAACGCCTGAATCCTTTATGATGGCTGAGGATGCAGAGCGCTCGGCTCCTTACGAGAGTTTGCTGGTTATCATTCCACCCAACGCTGCTGCCGAGGCTGTCCGGGAGTTGGGAGGCAATCCCCCCTCACCTGTCCCCCCACTTCCCGAGAGAACACCAGAATCATTTGAGCTAGCACTGGATCAAGCTCCCGGGGAGCAGAAGTCAGCGGTCACGCCGGCAGTGAACCGGAACAGAATAGGGATGTCTTCAGAATGGTCCGGGGATTTAAAGCCCAGTGAGACCAAACATTGGTTGAGGAGTAAGAGTCTGAAAGCAAAAATGACCTTCACAGTACCAGAACCACATCCTGATTTTGCATCATATACAACTCCAAACCTCCCCCCTTACTGTCCGCCTTTGGACCCGCTGACCCCTCCGCTGCTTCCTCAAACTGAGGAGAGCCTGACTCCTCCACTTCCTGACAGAACCCCCGAGTCCTTCATCCTCATCACAGAACAAGTTGAGGAGAAAGGCGCCCTCTGCCCGCAGCCATTAGAAACAACCCAGGCCTTACCGAGGGTAGGCTTCTCGTCTGAGTGGGACGGCACCGTTCAGCCAAAGAAATTCCTCGACGTTGTAATGAGCCGGAGCAAGaGCGTTCGAGCTAAAAGTTCCAGAGAAGAACTAGTGGGGCCGCACGAGGCCAACCACAGGCTCTCCCTGAACACCGACACATCAGGAAACAAATCAGACAAAAGCAACGAGAAGGGCGTGTTGCGGACGAAGAGTCTGAAGTTCTTTAGACACAAACAAAGACCTAAAACCGCCCCTCCACCGCCTCCCACTCAAGCTGAAACTCGGCCTACGTCCAACGGTGCCTCGTCATCAGTGTTCAAATTTGGATTTGGGAACCGTTTTGGAAAGCCCAAAGGGCCCAGGAGTTACCCAGAGACCTGGGTTTAATATTAAGAGGGTCACCGCtctctacataaaaaaaaaaaacggaacgGTGATCAACATAATGCATTGCATAGCTAAAGGACTCGGAGAGTTGGAAGTTTATCCACATACAGTGGACCTAAAAAGCACGGAGTGCCGCTTCTCTTTGTCTCGCACAGCGCAGCAGCACCCTCAGCAGAGCACAGGAAGTGCCTTGTTACCAGCTCTGATGCATTTTGTACAACATATCAACTAAGTTTTGATTATTGATCGGTGCACAGCCACTTGGACCAATGACTTGAATGTTTAATGGAAATCTCCGCCTCGCTGTTAAACTTGGTGGATGAGGAATATATTTAGCGTTTGCGTGCCTTTGTGGTTTtgtatgaaataataaaaaaaaaaaaaacgggtaTAACGTTGCATCCAGCACACCACTTTTTCTATTCCAAAAGACATCAAACTAAACATCACTCAGGGTACCATGcgtgtcatttggttttgtttCCTTGCTGTAACTCACACATCCATCTGTAGGCTTTAAATGATTATAAAACCATCGTCATTTAAATGATCAACATCTTAAAGTGGATGTCTCAGTGAGTGTGATGTATACTGAACATGAATGTGATGGAACTGTACAGTTAGACCGTGTTACAcacaaaattatttattaaaaaatatagaaagtc

Function

NR:

description
tyrosine-protein phosphatase non-receptor type 22-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800730.1 True 3450 mRNA 0.50 27 10542933 10566475
XM_039800731.1 False 3387 mRNA 0.50 26 10542933 10566475

Neighbor

gene id symbol gene type direction distance location
si:ch73-206d17.1 NA coding downstream 217722 10316819 ~ 10325211 (-)
LOC120558781 LOC105013598,LOC108237630,LOC101472165,LOC107390417,LOC101079871 coding downstream 406552 10131691 ~ 10136381 (-)
LOC120558779 LOC101471596,LOC102789400,LOC103365659 coding downstream 433833 10094913 ~ 10109100 (-)
mul1b mul1 coding downstream 557800 9978253 ~ 9985133 (-)
zgc:193690 LOC104936306,LOC102788238,LOC100707688,LOC102213016,LOC101470444,LOC102313919 coding downstream 609741 9925177 ~ 9933192 (-)
si:dkey-261h17.1 LOC100710642 coding upstream 301383 10867858 ~ 10906926 (-)
plxna2 LOC101478991,LOC100710907,LOC102296543 coding upstream 343343 10909818 ~ 11129310 (-)
LOC120558517 slc26a9 coding upstream 771132 11337607 ~ 11348247 (-)
slc48a1a slc48a1,LOC101074998 coding upstream 781811 11348286 ~ 11360195 (-)
itga5 LOC103365860,LOC103385260 coding upstream 815707 11382182 ~ 11421461 (-)
G48623 NA non-coding downstream 138136 10404137 ~ 10404797 (-)
G48617 LOC103365731,LOC108237576,LOC102292634,LOC100710458,LOC104928629,LOC101473555 non-coding downstream 167471 10303451 ~ 10375462 (-)
G48569 NA non-coding downstream 243054 10299544 ~ 10299879 (-)
G48522 NA non-coding downstream 518940 10023128 ~ 10023993 (-)
LOC120558372 NA non-coding downstream 524579 10014403 ~ 10018354 (-)
G48638 NA non-coding upstream 12601 10579076 ~ 10579364 (-)
G48705 NA non-coding upstream 102485 10668960 ~ 10787890 (-)
G48715 NA non-coding upstream 122982 10689457 ~ 10698533 (-)
G48716 NA non-coding upstream 125036 10691511 ~ 10780166 (-)
LOC120558409 NA non-coding upstream 143287 10709762 ~ 10710383 (-)
G48523 NA other downstream 517108 10024994 ~ 10025825 (-)
hipk1a LOC103359735 other downstream 757692 9766311 ~ 9785241 (-)
c1qtnf12 fam132a other downstream 789247 9727874 ~ 9753686 (-)
olfml3a LOC103359736,LOC104967461,LOC102308353,LOC101465779,LOC102785892 other downstream 818799 9689729 ~ 9724134 (-)
plekhg5b plekhg5 other downstream 1023478 9427206 ~ 9519455 (-)
G48697 NA other upstream 74930 10641405 ~ 10733887 (-)
LOC120558961 NA other upstream 937352 11503827 ~ 11508337 (-)
srxn1 srxn1 other upstream 1319490 11885965 ~ 11891139 (-)
peds1 LOC104919928,LOC103354371 other upstream 1392904 11959379 ~ 11979035 (-)
G49083 LOC103354491,LOC102226477,LOC108232148 other upstream 1560411 12126886 ~ 12128425 (-)

Expression


Co-expression Network