LOC120559206 (LOC103355075,LOC100698283,LOC101476589)


Basic Information

Item Value
gene id LOC120559206
gene name LOC103355075,LOC100698283,LOC101476589
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 13520484 ~ 13527197 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800755.1
ATAAAACAACATCTAAAAGAAACGAATTTCTCATGGCAGTTGTTTAAacaatgtaggcaataaaagAAACCACcaccttgtttttttattcagaccCACGTTAAGGCAAGcaggaggataaaaaaaaaatacgttgTCCCTGTATGGGCAGTTTCTGCTGCTGTGTGCAGCTTTGACACTCGGGAACACAGCAGACACAATCGGGGACATGGGACCGTGAAAGTATGGCGGATGCCGAGGAGCCGGAGAAGAAAAGAAGGCGAATAGAGGACCTGACTGAGAAAATGGCTGTAGATGGTGGACACAGGGACGGTGGTTGCGACTGGGATGGCCGGTGGAATCATGTGAGGAAGTTTTTGGAGAGACCTGGCCCGTTCACCCATCCTGACTTTGAGCCAAGCACTGAGTCTCTACAGTTCTTGTTGGAGACATGCAAGATTCTGGTCATTGGTGCTGGAGGACTTGGATGTGAGCTCCTCAAAAACCTGgcCCTGTCTGGATTTCGCCTTATTCATGTGGTTGACATGGACACGATTGATGTGTCCAACCTCAACAGGCAGTTTCTTTTCCGATCCAAAGATGTTGGACGACCAAAGGCAGAAGTTGCTGCCGACTTCATCAACAGTCGTATCCCTGGATGTAAAGTGGTCCCTCACTTTAAGAAGATCCAAGACTTTGATGACTCTTTCTACAGGCAGTTCCACATCATCGTCTGTGGACTGGACTCCATCATTGCCAGACGCTGGATGAACGGGATGCTGATATCCCTCCTGAGCTATGAAGACGGCGTCCTGGACCCCAGCTCCATCATTCCTCTCATTGATGGAGGAACGGAGGGCTTAAAAGGAAACGCTCGTGTCATTCTGCCAGGCATGACTGCATGCATCGACTGCACATTGGAGCTGTACCCGCCACAGATTAATTTCCCCATGTGCACCATTGCGTCAATGCCTAGGTTACCAGAACATTGCATTGAATATGCCAGAATCTTACAGTGGCCAAAAGAAAAGCCATTTGGAGATACCAGCTTAGATGGAGACAACCCAGAGCACATCCAGTGGGTGTTTGAAAGAGCCCAAGAAAGAGCTGCAGAGTTTAACATTACAGGAGTGACATACAGACTCACTCAAGGAGTTGTGAAGAGGATCATTCCTGCTGTGGCATCAACTAATGCTGTTATTGCTGCTGCCTGTGCCACGGAGGTTTTTAAGATTGCTACAAGTGCGTATATTCCTTTAAACAATTACATGGTCTTCAATGACGTGGATGGACTGTACACCTACACTTTTGAAGCTGAACGGAAGGAAAATTGTTCAGCATGCAGCCAGGTGCCTCAGGATCTTCAGTTCTCTCCTTCTGCCAAATTACAGGAGGTTTTGGAGTACCTTACAGAGAACGCCTCACTACAAATGAAATCCCCGGCTATCACCACAACTCTGGAAGGGAAGAATAAGACGCTGTATTTGCAGTCGGTAAAGTCCATCGAGGAACGAACCAGGCCAAACCTCTGTAAAACACTGAAAGAGCTGGGCTTGTCAGACGGACAGGAACTGGCTGTGGCTGACGTCACCACGCCTCAGACGGTTCTCTTCAAGCTCAATTTCACCACCTGAACAATCCTTACAGCACTCAGCACTGGCGACAGATGGACTGCATCCCAATGCAGTAGCACAACTAATGATGTAAATAATATGAGTGAGGTCTCACTTGTGGGATTGGTTTGGTTGTCTTATGAAGATGGACTCATTTCTCATTAAGCATTGTTTTTTCTATTAGTATGTTGTTTACTTCTTGATGTATTTGTCCTGTTTTGACTTATTATATTGTAGCTATTTCCCTGTCAATCAAAGGAGAATAATGATGTGCACTGTATACTCTAATAAAGTTGTATTATCATGGTTGTA
>XM_039800756.1
ATAAAACAACATCTAAAAGAAACGAATTTCTCATGGCAGTTGTTTAAacaatgtaggcaataaaagAAACCACcaccttgtttttttattcagaccCACGTTAAGGCAAGcaggaggataaaaaaaaaatacgttgTCCCTGTATGGGCAGTTTCTGCTGCTGTGTGCAGCTTTGACACTCGGGAACACAGCAGACACAATCGGGGACATGGGACCGTGAAAGTATGGCGGATGCCGAGGAGCCGGAGAAGAAAAGAAGGCGAATAGAGGACCTGACTGAGAAGTTAGTGACGAATGCAAAATAAAGAATGGCTGTAGATGGTGGACACAGGGACGGTGGTTGCGACTGGGATGGCCGGTGGAATCATGTGAGGAAGTTTTTGGAGAGACCTGGCCCGTTCACCCATCCTGACTTTGAGCCAAGCACTGAGTCTCTACAGTTCTTGTTGGAGACATGCAAGATTCTGGTCATTGGTGCTGGAGGACTTGGATGTGAGCTCCTCAAAAACCTGgcCCTGTCTGGATTTCGCCTTATTCATGTGGTTGACATGGACACGATTGATGTGTCCAACCTCAACAGGCAGTTTCTTTTCCGATCCAAAGATGTTGGACGACCAAAGGCAGAAGTTGCTGCCGACTTCATCAACAGTCGTATCCCTGGATGTAAAGTGGTCCCTCACTTTAAGAAGATCCAAGACTTTGATGACTCTTTCTACAGGCAGTTCCACATCATCGTCTGTGGACTGGACTCCATCATTGCCAGACGCTGGATGAACGGGATGCTGATATCCCTCCTGAGCTATGAAGACGGCGTCCTGGACCCCAGCTCCATCATTCCTCTCATTGATGGAGGAACGGAGGGCTTAAAAGGAAACGCTCGTGTCATTCTGCCAGGCATGACTGCATGCATCGACTGCACATTGGAGCTGTACCCGCCACAGATTAATTTCCCCATGTGCACCATTGCGTCAATGCCTAGGTTACCAGAACATTGCATTGAATATGCCAGAATCTTACAGTGGCCAAAAGAAAAGCCATTTGGAGATACCAGCTTAGATGGAGACAACCCAGAGCACATCCAGTGGGTGTTTGAAAGAGCCCAAGAAAGAGCTGCAGAGTTTAACATTACAGGAGTGACATACAGACTCACTCAAGGAGTTGTGAAGAGGATCATTCCTGCTGTGGCATCAACTAATGCTGTTATTGCTGCTGCCTGTGCCACGGAGGTTTTTAAGATTGCTACAAGTGCGTATATTCCTTTAAACAATTACATGGTCTTCAATGACGTGGATGGACTGTACACCTACACTTTTGAAGCTGAACGGAAGGAAAATTGTTCAGCATGCAGCCAGGTGCCTCAGGATCTTCAGTTCTCTCCTTCTGCCAAATTACAGGAGGTTTTGGAGTACCTTACAGAGAACGCCTCACTACAAATGAAATCCCCGGCTATCACCACAACTCTGGAAGGGAAGAATAAGACGCTGTATTTGCAGTCGGTAAAGTCCATCGAGGAACGAACCAGGCCAAACCTCTGTAAAACACTGAAAGAGCTGGGCTTGTCAGACGGACAGGAACTGGCTGTGGCTGACGTCACCACGCCTCAGACGGTTCTCTTCAAGCTCAATTTCACCACCTGAACAATCCTTACAGCACTCAGCACTGGCGACAGATGGACTGCATCCCAATGCAGTAGCACAACTAATGATGTAAATAATATGAGTGAGGTCTCACTTGTGGGATTGGTTTGGTTGTCTTATGAAGATGGACTCATTTCTCATTAAGCATTGTTTTTTCTATTAGTATGTTGTTTACTTCTTGATGTATTTGTCCTGTTTTGACTTATTATATTGTAGCTATTTCCCTGTCAATCAAAGGAGAATAATGATGTGCACTGTATACTCTAATAAAGTTGTATTATCATGGTTGTA

Function

NR:

description
PREDICTED: NEDD8-activating enzyme E1 catalytic subunit-like isoform X1

GO: NA

KEGG:

id description
K10686 UBA3, UBE1C; NEDD8-activating enzyme E1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800755.1 False 1904 mRNA 0.46 18 13520484 13527197
XM_039800756.1 True 1928 mRNA 0.46 18 13520484 13527197

Neighbor

gene id symbol gene type direction distance location
LOC120559852 LOC104955226,LOC102789706,LOC101477062 coding downstream 925 13510651 ~ 13519559 (-)
LOC120559332 NA coding downstream 72720 13445243 ~ 13447764 (-)
LOC120559331 LOC104955230,LOC106567269,LOC101065054 coding downstream 76538 13437589 ~ 13443946 (-)
nfascb NA coding downstream 84978 13414941 ~ 13435506 (-)
LOC120558460 NA coding downstream 114300 13396016 ~ 13406184 (-)
lmod3 lmod3 coding upstream 4682 13531879 ~ 13534915 (-)
LOC120559773 frmd4b,LOC101475124,LOC102291948,LOC102193657,LOC102787077 coding upstream 8204 13535401 ~ 13559677 (-)
mdfic2 NA coding upstream 82120 13609317 ~ 13616046 (-)
LOC120559678 LOC102200381 coding upstream 89679 13616876 ~ 13633635 (-)
LOC120559297 eif4e3,LOC101063498,LOC104943141 coding upstream 109866 13637063 ~ 13642433 (-)
G49514 NA non-coding downstream 87389 13432519 ~ 13433095 (-)
LOC120558464 NA non-coding downstream 141621 13376627 ~ 13378863 (-)
LOC120558462 NA non-coding downstream 152111 13366263 ~ 13368373 (-)
LOC120558463 NA non-coding downstream 162679 13355117 ~ 13357805 (-)
G49447 LOC104955234 non-coding downstream 236234 13281987 ~ 13284250 (-)
G49624 oard1,LOC106909399 non-coding upstream 128334 13655531 ~ 13657376 (-)
G49673 NA non-coding upstream 653143 14180340 ~ 14184391 (-)
G49675 NA non-coding upstream 678392 14205589 ~ 14205824 (-)
G49676 NA non-coding upstream 681375 14208572 ~ 14208852 (-)
G49677 NA non-coding upstream 685013 14212210 ~ 14212497 (-)
LOC120558461 NA other downstream 107306 13406785 ~ 13413178 (-)
LOC120558437 NA other downstream 207755 13308360 ~ 13312729 (-)
LOC120558587 NA other downstream 266876 13250986 ~ 13253608 (-)
camta1a LOC103354943,LOC102299287,LOC102779653,LOC102211199,LOC106922242,LOC104961361,LOC107390471,LOC108232047,LOC103144055 other downstream 299146 12924458 ~ 13221338 (-)
prickle3 prickle3,LOC102790576 other downstream 1080575 12415603 ~ 12439909 (-)
zgc:66479 NA other upstream 220206 13747403 ~ 13753866 (-)
smim29 LOC104942556,LOC104932788,LOC105416285,LOC106572343,LOC105022745 other upstream 512538 14039735 ~ 14125823 (-)
LOC120558710 NA other upstream 613183 14140380 ~ 14145222 (-)
LOC120558545 LOC104942567,LOC103358644 other upstream 889139 14416336 ~ 14432994 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other upstream 1004927 14532124 ~ 14534605 (-)

Expression


Co-expression Network