LOC120559283


Basic Information

Item Value
gene id LOC120559283
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 8572679 ~ 8577776 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800902.1
TATACATTTACCTCACCAGCAGCTCAGCAGGACTGTTCATTGATAACATCCAACACTGGATTCTCTTGGTTTGAGGGAGAAGTCACAGAGTCTGAGGCTGCAGAGTGATGGGGTCATATCCAGCCCTTGTGTTCGTGCTGCTGTTTTCAGCTACTCTGTCCTCCAGCTGTGATGGTGGAAAAGTTCTGGTTTACCCTATAGATGGGAGCCACTGGCTTAACATGAAAATCCTGGTGGAAGCGCTTCATTCTCAGGGCCATCAAATCACTGTAGTACGTTCCTCCACCAGCTGGTACGTTTCCGAATTCTCACCCCATTACACCTCCATCACCATCACCCAGGAGCAGTCCCAAAACTTAGAGAGCCAAGACTTCATGACCTCTTTTTTGAAGAGGTCAATAGAGATCCGTCGGAATAAAGGCTCACTATGGGCGTTTCTGGACTTCTATAGCAACCTTTTCAACATGATGGGGGAGAACCAGATTGTTGTGGCAAAAATGGTCGTCAGCATCTTTGAGAATAAGACACTAATTAAGGAGCTGAAGGAAAGTAGATATGATCTTTTTCTGACTGACCCTGCATTTCCAGGCGGAGTGCTGTTGGCACACTATCTCCAGCTTCCCTTGGTTTTCAATGTGCgctggctttacaatggagaGGCCCACTTCGCCATTGCTCCTTCTCCTCTGTCCTACGTCCCTGAATTGTTCACTGACCACTCTGACAAGATGGACTTTTTCCAAAGAATCCATAATATTATCCATCATAGCATGCTGGTTTACATGTACCACTATGTCTCAAATCCGCCTTACCAGGATGTGTGTGATCATTACTTTGGACCCGATGTCAGCGTCATGTCTCTAATCCAGGGAGCTGATCTTTGGCTAATGCGAGTTGACTTTGCATTTGAGTTCCCTCGTCCCACAATGCCCAATGTCGTCTACATTGGAGGGTTCCAGGGTAAGCCCTCCAAGCCTCTTCCATCAGATTTAGAGGATTTTGTGCAGAGTTCCGGTGAACATGGGGTGGTCGTCATGACCCTGGGTACCCTGCTGAGCGACCTCGGCCCTGAAATATCGGAAATTATCGCCTCATCATTTGCCAATCTCCCTCAGAAGGTCGTGTGGAGACACATCGGGAAAAGACCCATCACTCTGGGAAACAACACCATGCTGGTTGAATGGCTGCCTCAAAATGACTTACTAGGTCACCCTAAAACCAAGGTTTTTGTCACGCATGGGGGTACTAATGGAATTTACGAGGCCATCTACCACGGTGTCCCAGTTCTGGGCATTCCTCTCATCTTTGACCAGTATGACAACATGGTGCGTCTGAAGTCACGGGGAGTAGCTGAGATTGCTGAAGTGACAACCTTGGATGTTGAGTCTCTGACAAGTACTCTGAAGAATATTATAGACCCAGAAAAGCCATACAAACAGAATATGCTCAAACTGTCACGGCTTCATCATGACAAACCAATGAAACCCCTAGACAGTGCCATTTTCTGGATCGAGTTCGTCATGAGGCACAAGGGAGCAGCACATCTGCGCACTGAGTCATATAAGTTGCCATGGCACACCTATCACTGTCTCGATGTGATGGCAGTCTTTGCAGGACTTGGTTTGCTGATCATCGCATTAGTTTGGGTTTTCTGTAGATGTATCATTGGATGTTTGATAAGGACCAAGAAGTCCATATCAAAGTCCAAGAATGAATAGATAACCTCACAATGAAGCAACCTGGAGACTGTTGAAACGAGTGAGGTCAGAATTAAataggatttattgccaagtaacacatacaaggaatttgccttgtgGTTGGTGCAtgcataaacatattaaaaggaaataaagaataaatgtaAAAGACAGAATAACCTAATCTCTCTGCTGAACTGTCtttttgcaacaacaaaaaaatgtgatttttttgcaTATTTTACATACTGATGT

Function

GO:

id name namespace
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800902.1 True 1955 mRNA 0.45 2 8572679 8577776

Neighbor

gene id symbol gene type direction distance location
fitm2 fitm2 coding downstream 316713 8252178 ~ 8255966 (-)
jph2 jph2,LOC104937215 coding downstream 354798 8188068 ~ 8217881 (-)
LOC120558991 LOC108255233,LOC108247626,LOC103363443,LOC102224440,LOC102211704,LOC108251018 coding downstream 397687 8172190 ~ 8174992 (-)
LOC120558989 tuba1c,LOC106676044,LOC102211704,LOC103363443,LOC103148207,LOC107557552,LOC108255233 coding downstream 402953 8164469 ~ 8169726 (-)
LOC120558984 sarnp,LOC102800079 coding downstream 441942 8123547 ~ 8130737 (-)
gdi1 gdi1,LOC105918302,LOC100709395 coding upstream 55279 8633055 ~ 8643551 (-)
taf8 taf8 coding upstream 84700 8662476 ~ 8674082 (-)
g0s2 NA coding upstream 98341 8676117 ~ 8677135 (-)
camk1gb NA coding upstream 104855 8682631 ~ 8700177 (-)
mical1 LOC103361624 coding upstream 138984 8716760 ~ 8743028 (-)
G48010 ttpal non-coding downstream 239158 8330117 ~ 8333521 (-)
LOC120559498 NA non-coding downstream 276211 8281947 ~ 8296468 (-)
G47935 LOC107659949,LOC107714908,LOC106456382,LOC103385300 non-coding downstream 393579 8178655 ~ 8179100 (-)
G47971 NA non-coding downstream 498444 8047299 ~ 8074235 (-)
G47972 NA non-coding downstream 522258 8047822 ~ 8050421 (-)
G48128 NA non-coding upstream 33922 8611698 ~ 8654319 (-)
G48153 NA non-coding upstream 129764 8707540 ~ 8707965 (-)
LOC120558360 NA non-coding upstream 165559 8743335 ~ 8746512 (-)
G48255 NA non-coding upstream 499299 9077075 ~ 9088743 (-)
G48285 NA non-coding upstream 633148 9210924 ~ 9212825 (-)
ada ada other downstream 162945 8381117 ~ 8409734 (-)
G47934 LOC103363443,LOC106920718,LOC105016959,LOC102211704,LOC108251018 other downstream 385128 7771936 ~ 8187551 (-)
G47937 gpr182,LOC103467901,LOC103130457,LOC106963994 other downstream 685829 7815151 ~ 7886850 (-)
G47814 NA other downstream 1073877 7485427 ~ 7498802 (-)
LOC120558602 NA other downstream 1536304 6955204 ~ 7036375 (-)
LOC120559289 LOC106911506,LOC106515592 other upstream 125189 8702965 ~ 8705483 (-)
LOC120558858 LOC103370645,LOC100704217,LOC102196282,LOC102305949,LOC101463755,LOC102780123 other upstream 801224 9379000 ~ 9408403 (-)
plekhg5b plekhg5 other upstream 849430 9427206 ~ 9519455 (-)
olfml3a LOC103359736,LOC104967461,LOC102308353,LOC101465779,LOC102785892 other upstream 1111953 9689729 ~ 9724134 (-)
c1qtnf12 fam132a other upstream 1150098 9727874 ~ 9753686 (-)

Expression


Co-expression Network