taf8 (taf8)


Basic Information

Item Value
gene id taf8
gene name taf8
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 8662476 ~ 8674082 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800914.1
ACGACGACATAAATTCACACCATGTTTACTAATGGCGGCTAAAACGACCGTCGGAAAAATTACGTTTTTTCCATTATAGAGTTAAATTAGTTTACTCCAAAGAGCAGAGTacaaataatcacatatggCGGATCCTGTGGTTGCATCTAGAGGTTCACTGAATGAAGGAGGGCGTGGGAGTAGTGGTAAAGCAGCTACCAGTCCTGCAGAGAACTACCACCTGGCCCGACGTCGcaccctgcaggttgttgtcaGTGCCCTGCTGACAGAGTGTGGCTTCGAGAGCGCCGAGAAGGCAGCGGTGGAGACACTCACTGAGATGATGCAGAGCTATATAACTGAAATAGGTCGGTGTGCTAAAGCTTATTGTGAACACACAGCCAGAAGCGTCCCAACCCTGGCAGATACAGTGGTCACACTCATTGAAATGGGTTTCAATGCCGACACCCTGCCTGTGTATGCCAAGAGATCACAGAGGATGGTCATAACTGCCCCTCCAGTGACGAACGCACCTGTGACTCCCAAAGCACTGTCGGCCGGACAGAAACGCATACATCCGGCTTACATCCCCAGCCACTTCCCAGAGTTCCCTGACCCTCACACGTACATCAAGACACCTACATTCAGGGAGCCTGTGTCAGACTACCAAGTGGTGAGAGAGAAGGCAGCAAGTCAGAAGAGAGACGTGGAGCGAGCGCTCACACGCTTCATGGCCAAGACGGGAGAAACTCAGAGCCTCTTCAAAGACGACATCACTGCCTTCCCATTGATCGCAGCACAACCAAGCAGCATCCCATATCTCAGTGCCCTCCTGCCCTCGGAGCTGGAATTGCAGACTCTGGAGGAGACGGACTCCTCGGAGCAGGACgaccagacagacagtgagaacGCAGCAGGAAACCTCATCAATGATGATCCAGGAGGTGACAAAGAGAACTCCATGCTTCCTCCCAGCAGCGTCGTTCCCTCCGCTAAGGCTAGCGAGGACAACGTGATCGACAACCCGTACCTTCGGCCGGTCAAGAAACCCAAAGTGAGGAGGAAGAAATGAAACCAATATGAgccaacagacacacacttgcCACAGTGGTTGGTGCTTCCAGCAGTGCAGCGATTCCCTccccagagaggagagaggcacGGCGGTGAAGCGTCCCGGACCAGCGCCGCTGTTGGTATTTTGTATATTGACAGACTTCTTTTGAAGAgacaacttattttttttttgttgcgttACTTTTCAGCAAGCACTAACTTTGTAAAAACATGGTGAAATCACAGTCATTTTGTGAATAAAGATAAattacttgtttgttttttactcttgA
>XM_039800915.1
ACGACGACATAAATTCACACCATGTTTACTAATGGCGGCTAAAACGACCGTCGGAAAAATTACGTTTTTTCCATTATAGAGTTAAATTAGTTTACTCCAAAGAGCAGAGTacaaataatcacatatggCGGATCCTGTGGTTGCATCTAGAGGTTCACTGAATGAAGGAGGGGTATGTTAAGAGACGGTTTTCTTCTCTCCGTCATTAGCAGGatgcaggctaacgttagctaacttcTCCGTAGGTTTGCAGTGTTTAGCTAACTGTTAGCAGTCAGTTGGAAGAGACTCGTCTGTACTGAATGTGTCTCAAGGAGTAATTTAAATAATTCCTCCTGAAGCCACAATGAGCCTGCTGTGCTTTATCACAGACGACAAGCGTGGGAGTAGTGGTAAAGCAGCTACCAGTCCTGCAGAGAACTACCACCTGGCCCGACGTCGcaccctgcaggttgttgtcaGTGCCCTGCTGACAGAGTGTGGCTTCGAGAGCGCCGAGAAGGCAGCGGTGGAGACACTCACTGAGATGATGCAGAGCTATATAACTGAAATAGGTCGGTGTGCTAAAGCTTATTGTGAACACACAGCCAGAAGCGTCCCAACCCTGGCAGATACAGTGGTCACACTCATTGAAATGGGTTTCAATGCCGACACCCTGCCTGTGTATGCCAAGAGATCACAGAGGATGGTCATAACTGCCCCTCCAGTGACGAACGCACCTGTGACTCCCAAAGCACTGTCGGCCGGACAGAAACGCATACATCCGGCTTACATCCCCAGCCACTTCCCAGAGTTCCCTGACCCTCACACGTACATCAAGACACCTACATTCAGGGAGCCTGTGTCAGACTACCAAGTGGTGAGAGAGAAGGCAGCAAGTCAGAAGAGAGACGTGGAGCGAGCGCTCACACGCTTCATGGCCAAGACGGGAGAAACTCAGAGCCTCTTCAAAGACGACATCACTGCCTTCCCATTGATCGCAGCACAACCAAGCAGCATCCCATATCTCAGTGCCCTCCTGCCCTCGGAGCTGGAATTGCAGACTCTGGAGGAGACGGACTCCTCGGAGCAGGACgaccagacagacagtgagaacGCAGCAGGAAACCTCATCAATGATGATCCAGGAGGTGACAAAGAGAACTCCATGCTTCCTCCCAGCAGCGTCGTTCCCTCCGCTAAGGCTAGCGAGGACAACGTGATCGACAACCCGTACCTTCGGCCGGTCAAGAAACCCAAAGTGAGGAGGAAGAAATGAAACCAATATGAgccaacagacacacacttgcCACAGTGGTTGGTGCTTCCAGCAGTGCAGCGATTCCCTccccagagaggagagaggcacGGCGGTGAAGCGTCCCGGACCAGCGCCGCTGTTGGTATTTTGTATATTGACAGACTTCTTTTGAAGAgacaacttattttttttttgttgcgttACTTTTCAGCAAGCACTAACTTTGTAAAAACATGGTGAAATCACAGTCATTTTGTGAATAAAGATAAattacttgtttgttttttactcttgA

Function

symbol description
taf8 Predicted to enable protein heterodimerization activity. Predicted to be involved in transcription initiation from RNA polymerase II promoter. Predicted to act upstream of or within cell differentiation. Predicted to be located in cytoplasm and nucleus. Predicted to be part of transcription factor TFIID complex. Orthologous to human TAF8 (TATA-box binding protein associated factor 8).

NR:

description
PREDICTED: transcription initiation factor TFIID subunit 8 isoform X2

GO:

id name namespace
GO:0046982 protein heterodimerization activity molecular_function

KEGG:

id description
K14649 TAF8; transcription initiation factor TFIID subunit 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800914.1 False 1328 mRNA 0.50 8 8662476 8674082
XM_039800915.1 True 1535 mRNA 0.49 8 8662476 8674082

Neighbor

gene id symbol gene type direction distance location
gdi1 gdi1,LOC105918302,LOC100709395 coding downstream 18925 8633055 ~ 8643551 (-)
LOC120559283 NA coding downstream 84700 8572679 ~ 8577776 (-)
fitm2 fitm2 coding downstream 406510 8252178 ~ 8255966 (-)
jph2 jph2,LOC104937215 coding downstream 444595 8188068 ~ 8217881 (-)
LOC120558991 LOC108255233,LOC108247626,LOC103363443,LOC102224440,LOC102211704,LOC108251018 coding downstream 487484 8172190 ~ 8174992 (-)
g0s2 NA coding upstream 2035 8676117 ~ 8677135 (-)
camk1gb NA coding upstream 8549 8682631 ~ 8700177 (-)
mical1 LOC103361624 coding upstream 42678 8716760 ~ 8743028 (-)
src LOC103385228,LOC101479745,LOC102203088,LOC103361614 coding upstream 72885 8746967 ~ 8788376 (-)
kcng1 kcng1 coding upstream 118452 8792534 ~ 8841006 (-)
G48128 NA non-coding downstream 8157 8611698 ~ 8654319 (-)
G48010 ttpal non-coding downstream 328955 8330117 ~ 8333521 (-)
LOC120559498 NA non-coding downstream 366008 8281947 ~ 8296468 (-)
G47935 LOC107659949,LOC107714908,LOC106456382,LOC103385300 non-coding downstream 483376 8178655 ~ 8179100 (-)
G47971 NA non-coding downstream 588241 8047299 ~ 8074235 (-)
G48153 NA non-coding upstream 33458 8707540 ~ 8707965 (-)
LOC120558360 NA non-coding upstream 69253 8743335 ~ 8746512 (-)
G48255 NA non-coding upstream 402993 9077075 ~ 9088743 (-)
G48285 NA non-coding upstream 536842 9210924 ~ 9212825 (-)
G48306 NA non-coding upstream 608214 9282296 ~ 9282522 (-)
ada ada other downstream 252742 8381117 ~ 8409734 (-)
G47934 LOC103363443,LOC106920718,LOC105016959,LOC102211704,LOC108251018 other downstream 474925 7771936 ~ 8187551 (-)
G47937 gpr182,LOC103467901,LOC103130457,LOC106963994 other downstream 775626 7815151 ~ 7886850 (-)
G47814 NA other downstream 1163674 7485427 ~ 7498802 (-)
LOC120558602 NA other downstream 1626101 6955204 ~ 7036375 (-)
LOC120559289 LOC106911506,LOC106515592 other upstream 28883 8702965 ~ 8705483 (-)
LOC120558858 LOC103370645,LOC100704217,LOC102196282,LOC102305949,LOC101463755,LOC102780123 other upstream 704918 9379000 ~ 9408403 (-)
plekhg5b plekhg5 other upstream 753124 9427206 ~ 9519455 (-)
olfml3a LOC103359736,LOC104967461,LOC102308353,LOC101465779,LOC102785892 other upstream 1015647 9689729 ~ 9724134 (-)
c1qtnf12 fam132a other upstream 1053792 9727874 ~ 9753686 (-)

Expression


Co-expression Network