LOC120559297 (eif4e3,LOC101063498,LOC104943141)


Basic Information

Item Value
gene id LOC120559297
gene name eif4e3,LOC101063498,LOC104943141
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 13637063 ~ 13642433 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800921.1
GACCAATGAGTCAGCAGCTGATCGGGGCTAATTTTACCTAACGAACCTATATATAACGACAGCAGCCCTGGTGAAAACATCTGCACAAGAGACCTGCTAGTTTTTTACCAATTCGTTCGGTTTTTAGAGCTAACAATGTCAGTTCCAGTAGCTGCATTACAACTGAGCACATCATCCAGCCCGGGTCTGCTGGAGCACAACATTCACATCAGCGACATAGATTTGGAAAGGATTTCAAGTGACAATGAAAACGAAACTCTGCCTTTACATTCTTCGTGGACTTTCTGGCTTGATAGATCTCTACCAGGAGCAACAGCAGCTGAATGTGAGTCAAACCTGAAGAAAATCTACACCGTGGAGACCGTCCAGAACTTTTGGAGAGTTTACAACAACATACCCATTGTCTCCAGCTTGCCATTGAGATGTAGCTATCATCTGatgagaggagaaagaaaaccACTCTGGGAAGAAGAAAGCAATGCTAAAGGTGGTGTTTGGAAGATGAAAGTACCCAAAGAATGCACTTCTGTTGTCTGGAAGGAGTTGCTATTGGCTACTATTGGAGAACAGTTCATTGATTTTTGTGCCTcagACGATGAAGTAGTTGGGGTCAGCGTCAGTGTAAGAGACAGAGAAGATGTGTTTCAGGTCTGGAATGGAAACGCTTCTTGTGCTAACGAGTCCAACATCTTAGGAAGGATCAATGAGCTCCTTCCACAAATACCTTTTAAAGCAGTGTTTTACAAACCACATGAGGAGCACCACGCTTTTGAAGGAGGTCGAAGAAATTAGCACATATTGCACATCAGCAGTCTAGAGATATACATGTTTTTTACTTGTGAACATGTTTTGGATAATATTTGGGCACATTTTGAAGCAACTGAGTTCATAGTTGCTTAATGTATTATCTTAAAGCTAGGGTAGGCATTTGTTTTGGTGTCGTTAAATACAAAGTAATaacctttcagcatattgtaattcaagtggtctgagagaaaaccagacttctgcacctcctcttggctctgtttttCGGGTTTTAGAAAATCTTGCCCGTGATGGGAGaatttggccaatcacaggtcatttcagataAAGAGCATTCCTATTGGCTGGTTTATAAAAGTAGATGCGTGTGTACGTTCCTTCAGATGGTGAAGGCCTGATTCAATGCTGGATAATCCTGCAGAAAAAGTTGCTGTTACAGCACTGGCAGAAACTGCCAATGGTGCAAAGCAACGCAAAAAAATGGAAGACAGGCAATAAAGGCAATAAAACACGCGTCAATATCGGCGAAGCGtttcagagatggagagaaaatgtTGATAATAGTTTAGCCTTCTGCTAACAGCTGTACAACGGCATCGGGATCACAATCACAATGGAGATGATATGCCGGTGCTCGTctggtgggaggggcttaggatagagagggagagagctgCAGAAGGAGGGCTGTTTTGGTTGTTGTTGCCTTTTTCAGAAAACTGCCTACACCGGCTTTAATTACAGTACATTAAATGTAGCCCATGTATTATGATTCTCAATCAATGGAATTTCCCATCTTCTGAGCACATTCATAATAATatccaaaatacttttttttattttagtcgaaaacaaaaaaaaatgtcagtttgATTTTATCTGtggcagtgtttgtgtgtttttatacttCCACATTTTGCAATTCCCTAACCAAAACAGCCGATCATGTACATGTAAATGTCAGGTTTATTTAGATGTATTATAGCATATTGTGTGCAGTTTGCTGAGCACAGACACAGCTAGGTCTTTGAATTAAATCTCATTTTTAGATCTAAGAGGAGCCCTAGTTTCACAAAGCAAACCTTTATCTTAACAATGCATTGCAAGGCTTTTCTAGGGAGCTCTTTTCTCCGTTTTGTATGTTACAGCCAAATACTGTTGCCTAACATAAATCTTTAGAGCAGAAAATTGCACAttcgttttttcttttcttttttaggatATCAGCGGATTGTAAAAGGAAATATGTTCTTGTTACAATAAAATGACCTCAGCGCACAAATCATCATGAGTAGATGCTGAGAAATATATGCAATCATTTCTATTCTGTAGAATTTGAAGCAAATTTGCAGTGTTGTGGTTGTCATTTTGTTTAAGCATCCGTCCCAAATCaagcactttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagataactGAGACCAAATCTACCTTGGTTttgtgtaaccttttctgatttgggtttttgttatttttctacttttaataGTAACTTGAGATGTGTAGATGATAACGTTGAAATTGTGTTTCATATGACCAGTGTAAAATGGAATTTGTGAAGCCTACTCTTTGTAGATACTATTGGCCCCAGGATAAATGATAAACACAACACATGACACCAGAAGATGTAGATCTAAGTCTCACTTAGATCTCCTTGAGCGACTGCTCAGGGCCTATTTTAGTGTATTTGCACAAATCGGGGGTGTTTGGTGAAGTGATGCAACCCCTGCAGCAGGGTCAAATCTGTAAGTTATTAAGAGATGGTTTACTACTGCACCAAAACAAAGTTCAGTGTCTCTCAAATCCATAGTTTTTAGGATTTCTTTTCTGTGGTAATGTAAAAGGCTGCATTTGtattattgaaataaaatgaaaaaaaatta
>XM_039800922.1
CTTTCTGGCTTGATAGATCTCTACCAGGAGCAACAGCAGCTGAATGTGAGTCAAACCTGAAGAAAATCTACACCGTGGAGACCGTCCAGTAGAACTTTTGGAGAGTTTACAACAACATACCCATTGTCTCCAGCTTGCCATTGAGATGTAGCTATCATCTGatgagaggagaaagaaaaccACTCTGGGAAGAAGAAAGCAATGCTAAAGGTGGTGTTTGGAAGATGAAAGTACCCAAAGAATGCACTTCTGTTGTCTGGAAGGAGTTGCTATTGGCTACTATTGGAGAACAGTTCATTGATTTTTGTGCCTcagACGATGAAGTAGTTGGGGTCAGCGTCAGTGTAAGAGACAGAGAAGATGTGTTTCAGGTCTGGAATGGAAACGCTTCTTGTGCTAACGAGTCCAACATCTTAGGAAGGATCAATGAGCTCCTTCCACAAATACCTTTTAAAGCAGTGTTTTACAAACCACATGAGGAGCACCACGCTTTTGAAGGAGGTCGAAGAAATTAGCACATATTGCACATCAGCAGTCTAGAGATATACATGTTTTTTACTTGTGAACATGTTTTGGATAATATTTGGGCACATTTTGAAGCAACTGAGTTCATAGTTGCTTAATGTATTATCTTAAAGCTAGGGTAGGCATTTGTTTTGGTGTCGTTAAATACAAAGTAATaacctttcagcatattgtaattcaagtggtctgagagaaaaccagacttctgcacctcctcttggctctgtttttCGGGTTTTAGAAAATCTTGCCCGTGATGGGAGaatttggccaatcacaggtcatttcagataAAGAGCATTCCTATTGGCTGGTTTATAAAAGTAGATGCGTGTGTACGTTCCTTCAGATGGTGAAGGCCTGATTCAATGCTGGATAATCCTGCAGAAAAAGTTGCTGTTACAGCACTGGCAGAAACTGCCAATGGTGCAAAGCAACGCAAAAAAATGGAAGACAGGCAATAAAGGCAATAAAACACGCGTCAATATCGGCGAAGCGtttcagagatggagagaaaatgtTGATAATAGTTTAGCCTTCTGCTAACAGCTGTACAACGGCATCGGGATCACAATCACAATGGAGATGATATGCCGGTGCTCGTctggtgggaggggcttaggatagagagggagagagctgCAGAAGGAGGGCTGTTTTGGTTGTTGTTGCCTTTTTCAGAAAACTGCCTACACCGGCTTTAATTACAGTACATTAAATGTAGCCCATGTATTATGATTCTCAATCAATGGAATTTCCCATCTTCTGAGCACATTCATAATAATatccaaaatacttttttttattttagtcgaaaacaaaaaaaaatgtcagtttgATTTTATCTGtggcagtgtttgtgtgtttttatacttCCACATTTTGCAATTCCCTAACCAAAACAGCCGATCATGTACATGTAAATGTCAGGTTTATTTAGATGTATTATAGCATATTGTGTGCAGTTTGCTGAGCACAGACACAGCTAGGTCTTTGAATTAAATCTCATTTTTAGATCTAAGAGGAGCCCTAGTTTCACAAAGCAAACCTTTATCTTAACAATGCATTGCAAGGCTTTTCTAGGGAGCTCTTTTCTCCGTTTTGTATGTTACAGCCAAATACTGTTGCCTAACATAAATCTTTAGAGCAGAAAATTGCACAttcgttttttcttttcttttttaggatATCAGCGGATTGTAAAAGGAAATATGTTCTTGTTACAATAAAATGACCTCAGCGCACAAATCATCATGAGTAGATGCTGAGAAATATATGCAATCATTTCTATTCTGTAGAATTTGAAGCAAATTTGCAGTGTTGTGGTTGTCATTTTGTTTAAGCATCCGTCCCAAATCaagcactttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagataactGAGACCAAATCTACCTTGGTTttgtgtaaccttttctgatttgggtttttgttatttttctacttttaataGTAACTTGAGATGTGTAGATGATAACGTTGAAATTGTGTTTCATATGACCAGTGTAAAATGGAATTTGTGAAGCCTACTCTTTGTAGATACTATTGGCCCCAGGATAAATGATAAACACAACACATGACACCAGAAGATGTAGATCTAAGTCTCACTTAGATCTCCTTGAGCGACTGCTCAGGGCCTATTTTAGTGTATTTGCACAAATCGGGGGTGTTTGGTGAAGTGATGCAACCCCTGCAGCAGGGTCAAATCTGTAAGTTATTAAGAGATGGTTTACTACTGCACCAAAACAAAGTTCAGTGTCTCTCAAATCCATAGTTTTTAGGATTTCTTTTCTGTGGTAATGTAAAAGGCTGCATTTGtattattgaaataaaatgaaaaaaaatta

Function

symbol description
eif4e3 Predicted to enable RNA 7-methylguanosine cap binding activity and translation initiation factor activity. Predicted to act upstream of or within regulation of translation and translational initiation. Predicted to be part of eukaryotic translation initiation factor 4F complex and mRNA cap binding activity complex. Orthologous to human EIF4E3 (eukaryotic translation initiation factor 4E family member 3).

NR:

description
PREDICTED: eukaryotic translation initiation factor 4E type 3 isoform X1

GO:

id name namespace
GO:0006413 translational initiation biological_process
GO:0005737 cytoplasm cellular_component
GO:0003743 translation initiation factor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800921.1 True 2781 mRNA 0.40 7 13637063 13642433
XM_039800922.1 False 2504 mRNA 0.39 7 13637063 13642153

Neighbor

gene id symbol gene type direction distance location
LOC120559678 LOC102200381 coding downstream 3428 13616876 ~ 13633635 (-)
mdfic2 NA coding downstream 21017 13609317 ~ 13616046 (-)
LOC120559773 frmd4b,LOC101475124,LOC102291948,LOC102193657,LOC102787077 coding downstream 77386 13535401 ~ 13559677 (-)
lmod3 lmod3 coding downstream 102148 13531879 ~ 13534915 (-)
LOC120559206 LOC103355075,LOC100698283,LOC101476589 coding downstream 109866 13520484 ~ 13527197 (-)
LOC120558698 LOC103355245,LOC104927444,LOC105928575,LOC103467653,LOC107391259,LOC106918288,LOC101471341 coding upstream 82655 13725088 ~ 13739877 (-)
LOC120558999 NA coding upstream 100756 13743189 ~ 13746688 (-)
LOC120558701 LOC106516757,LOC108231961 coding upstream 112496 13754929 ~ 13779091 (-)
LOC120558702 LOC103355290,LOC102793276,LOC102312415,LOC101471251,LOC100701884 coding upstream 208013 13850446 ~ 14082805 (-)
LOC120558709 spdef,LOC103372894 coding upstream 542876 14185309 ~ 14193336 (-)
G49514 NA non-coding downstream 203968 13432519 ~ 13433095 (-)
LOC120558464 NA non-coding downstream 258200 13376627 ~ 13378863 (-)
LOC120558462 NA non-coding downstream 268690 13366263 ~ 13368373 (-)
LOC120558463 NA non-coding downstream 279258 13355117 ~ 13357805 (-)
G49447 LOC104955234 non-coding downstream 352813 13281987 ~ 13284250 (-)
G49624 oard1,LOC106909399 non-coding upstream 13098 13655531 ~ 13657376 (-)
G49673 NA non-coding upstream 537907 14180340 ~ 14184391 (-)
G49675 NA non-coding upstream 563156 14205589 ~ 14205824 (-)
G49676 NA non-coding upstream 566139 14208572 ~ 14208852 (-)
G49677 NA non-coding upstream 569777 14212210 ~ 14212497 (-)
LOC120558461 NA other downstream 223885 13406785 ~ 13413178 (-)
LOC120558437 NA other downstream 324334 13308360 ~ 13312729 (-)
LOC120558587 NA other downstream 383455 13250986 ~ 13253608 (-)
camta1a LOC103354943,LOC102299287,LOC102779653,LOC102211199,LOC106922242,LOC104961361,LOC107390471,LOC108232047,LOC103144055 other downstream 415725 12924458 ~ 13221338 (-)
prickle3 prickle3,LOC102790576 other downstream 1197154 12415603 ~ 12439909 (-)
zgc:66479 NA other upstream 104970 13747403 ~ 13753866 (-)
smim29 LOC104942556,LOC104932788,LOC105416285,LOC106572343,LOC105022745 other upstream 397302 14039735 ~ 14125823 (-)
LOC120558710 NA other upstream 497947 14140380 ~ 14145222 (-)
LOC120558545 LOC104942567,LOC103358644 other upstream 773903 14416336 ~ 14432994 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other upstream 889691 14532124 ~ 14534605 (-)

Expression


Co-expression Network