spats2 (spats2,LOC102777081)


Basic Information

Item Value
gene id spats2
gene name spats2,LOC102777081
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 11784803 ~ 11806444 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800949.1
ACCTGGCAACCCCGAAGGAGGAAAATATGCCCACAGCAGACTAGAGAGTACTTGCCATTAAAGACGGCTGGCGGTGGAAGTATCGGTGACCCGTTTCCAGAATCTACTGTTCAGTTTTCTTGCCAACACAAaTTTGGATCAACTTGGTAGAAAAACGAGAGGAAACCCCCAAATCTTTTCCTAAATGGTGGAGGACTGATCTCAACCTCATTCGTCCAACCCTCCTGCCAGTTGTGAGCCTTGTTGGCATCTTCTCGAACAAGAAAAACTGTGGGAAAGTGGCCACTCTTGGAGCCCTTATTTGACCACCATCTTAAACACATTTGAAGTGTTAATACTGTCTTGAGGAAGTACGCAACCAAACATTTCCTGGATACTTCTGTGTGACaacatggcaaaaaaaaacagcccaaAGGATACGTCAGGGGTGGTGTTTGACACACGCTCAAAAATGGCCATGTCCCAGGGAGGAACAGCTGATAGGATGAAAGAGAAGATCAGTGCCGTCAGGGCAGTTGTGCCCAACAAAAGTAACAACGAGATTGTGCTAGTGTTGCAGCATTTCGAAAACTGTGTTGACAAAGCCGTTCAAGCTTTCTTAGAAGGCAGTGCAGTTGAGATCCTGAAGGAGTGGAATGTCACCGGCAAAAAGAAGcccaagaagaaaaagaagcccAAGCCTCAGCCAGAGGCTTCAGCCGAGCCTGCTCCACCTGAGGCCACGTCGCCTGAGGAGGGCAAGGATGAGGTCAACGGCTTTCATGCCAACGGATCAGTAATGGACGTAGAGTCACTTGATTCTCTGAGTGAACAGCTGGACTCTGCCTCCCTGGATGCAGCCGAGCTGGACTCTGAACCTGTTACATCCGAAACCACCGGTGCAGAAGCAGAAAGTCAAGGTAGTGTTCCAAGTCCCCCCTTACAGCAAGGAGGGAGGAATCACCAGGGTCCCAGAGGCAACAAGAACCGACACAGGCCAGGCTCCAATTCACATCCACTCACTTCCTCATTTCCACCCAACACTGATGAACACGGATCATCAGGAGTCAAGAAGATGGCTCCCAACATTGACCGCTCTGTGAAGGACCTGCAGAGATGCACCGCCTCACTGACTCGCTACAGGATAGTGGTCAAGGAGGAGATGGACTCCTCAATCAAGAGGATGAAGCAGACGTTCGCTGAGCTCCAGAGCTCtttaATGGACCGAGAAGTGACTCTACTGGGAGAGATGGACAAAGTGAAAGCAGAGGCCATGGGGATTTTGGACTCCCGGcagaagagagcggaggagctcCGACGGCTGACCGACCAGTCAGCATCCATGTCTGAGGAGCAGTTGACTGAACTGCGGGCGGACATCAAGCACTTTGTGAGTGAGCGTAAATATGACGAGGACCTTGGGAAAGCTGTAAGATTTACATTTGATCTTGAACCGCTGAAGGCGAGCATCTTAGGGTTTGGATCAGtttACCATCCGCATACTGGCTACTCCCACCGGTCCCGCTGTAGCTCCACGTCCTCTTCGGTCGCCAGCCCGAGCCAGCTGGAgactcctcctcccccccagaCTCAAAGCACCCCCAATGAACACCGCCCTCCACCAAACAAACAGATTTTCCAAGGCAACAGGCGTACTTTCCAGGGACAAGGGTATCATTCGGGTGCTCAGAGGTATAACGGCGCTTCCTACCATGACCGGAACGCCGCTCGTGCTAACCACCGCTACCAGAGTGACAGTGGCTCTTCTGGTCCTTCGCAGCACTCACACAGCTCCAGAGGTCCCCACCATTTCTCCACGTCCTCCTACAACCCAGACCGACCCTCTCATAACGGGCTGCCCCAAAGGCCTCCGCGGACGCAATGCCCCTGACATTGGAAACCCCGTGCTTAATCAAACCCATCTACTAACCCTTGCACTCGTCTCCCCATAGCCTCCCCCTTGCCTTCTACACTCTTCCCCTCTACTAACTCCTTTCAATGAAGAATAGAATACAAGTTTACATATTTCTGTCAGTCGAGCTGTAGTGCCACCTCTCTACATCAAACTTGAAACGCTTTCACTGTCCTGTAATCGCTCATCCTTTTTGCATTTCTTCCATCCTGGTTAAGGTAACCGCTTCTATCTTTAGGCTCCCTTTGAGCGATCTCGTTGCTATGCTATTGCCAGTCTCTGTTATTTTCTACATTTAAGCTGTCTGCCAGAGACCGCCATGATTACCTGCAACATTTTGTGCACTATTGAAGTTGAGCTCTTAGTTCTATTTTTACGGTGGCTTATGTCAGCTCTCTGATTTGCACGTCagatctattttttttaaatatttttttctcgtCTCTCAGAACCATTTCAATGCCTTCACCGTGGAAAGCGTAGTATATGTGCTAGTGCTGCAGTTCTAGCATTTACAGAGATTTTTGTCATCATGAGAGTAGACCTGCAATCAACACTACAGACTATCATTAATCtttacaatgtaaaaaaaaaaaaaaaaatgaagcatATCAAACTGTAATCCAGAGCTTTTCGTATGGCTGCTACAAACCATAGAGAACTTGTTAACACTAGGACTTAGATGTGTTTGAGAGTAACTCTGTGAACAGAGAGGTTGCcgccttaaaggaatagttcgacatttGAGAAATGGCTCATTCCCTAACTTTCCGAGAGTTGGATACGAAGATGGATACCGCCCTCGTGTCTGTACGATAAATATGAAGCTGTCaacagcagccggttagcttagcacaaagactggaagcaggtggAAACAGCTTTGTTACCTGACCTAATGTCACAAAATCGGCCTTCCAGCACCTAAAGTTCAATAATCAACACTttctattttgtttattttgtacaaAAACTGAAGTGTAAAGACACCAAGTTGTGGTTTTATGGGGGGCGCGGGGGTTATGTGCCAGGCAGGTGGCGCAAAGCCAGCGGTTtcccttgtttccagtctttatgctaagctaagctaatcagccgctggctgtagcttcatatttaccgtacagacGTGACCgcggtatcaatcttctcatctaattcgCTGCAAGAAAACAAAGATGCACGTTACTCAAAATGTGGCGCTTTTCCTTTAAATATTGCCTAAGACAGTGATGCGTCGCGCTCCCACTGGCCAACGGTTATCGTGTGTGCTGTTGTTGGCTTGCTGTCCGTTATTTTGTAACAAAGAGAGGGCTCATTACCGTTTTGTAGAATACTGTTAAATAATGTCAAAACTCACAACAAAGGAAACTGTCTACATGCTGTTGTATATTTAGTCCTTTACAATTCTTCAAATGGATTTTCTTCCACACACAGTTTCTTCTTTGTGTTCTTGCGTTGTTATATGCAGATGGACGGCATATTAATGACATGCTTGCCTTTAGTCCCAGAGAGACTTCACATTTGCCTTTCTAGAGACATAGATGTCTGCATCATGATGGCTTCCTAAACAGATGGTACTTGTAGAGGAGATGATTTATAATTATATGTGTAAGAATAAgatcttttcttccttttttttttatattctcaaTTTATCCCATCCATGAACGTAAAACTGATCAAACCGATGAATGAATTAGAAGGTTGTATTGagctaagaattttttttttttttggtcttctATGGCTGCCAAGTAGACGCTTTAAGGCTGTTTTTGGGGTTATGTCTCATCGTACTGTCCACAGCTTCTAACAGAAAGCTGGTGCGTACCTCGGTGCTGATGATATGAAGCGGCCTGTCTTCTGGCAGTGGGCTTTAATTTAAGGGACCGGGACCCCCGGTGATGCCTCTTCTCTTCTTGTAGTTATGTACATACAGCATGTGAAGCGCCAAGGCTGTAATGTAACTGACTGGTTGTTACATAATTGCTGCATTTTCTCCATAATGTGTCGTCTTCCTTTTGAGCAgacttctccccccccccccattgttTGTTTCCTTGTGGGTTTTCATATGATGGGGagatttttcttcttatttaaGAGATTCAAAACCCCCAGTGATTATTAGTTAATATTGTGGAGAGAAGAGCGTTAACTTGTTTGGTGAATATGTACTAGAACGACACGTTTTGACTGAAATCGTCATCGCCCGTAGTTGCAGATGGTTTGATTTACTCCAGTATATGGAGATGCTGGATTTGTTCAATCATGACTCAAAGAGAGTAGATTGTGTCTGCCTCACTTTAaccactttttttgttttacattccAAACTGTAGGAATATTAGGTTATCGCCAAAGAAAtaattttgtccttttttttttttgttttttttttttgtttgctcgGCCTGTAAAGAATTCCAAAGGGGATAAATCCAACACTtcacctttttttcttcttcctatactacttttattttctgattccttactgtatatacatatatgtagcTATATAATTTTGTGCTCACATGGGGCATTTTGTATGTGATATTCATATTAGGCATAAATAATggaggttagacatttagttaaTTCATTCTTCCAGTAGACCTTGTGTCCTCCTCAAGACAACCTTTCTGAGACAACTGTTTACTCAAGTGCCTTTTCTTGTCTCCCACTGATTCATTGACATCCCCTCCACCAGAATATGGACCAAAGACATCGACCGTCCCCAAcaccccctctctttctccccactCACTGAATTGCACACTTTTTATTTACTATGAATAAACAGTTTGCaatactga

Function

symbol description
spats2 Predicted to be located in cytoplasm.

NR:

description
PREDICTED: spermatogenesis-associated serine-rich protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800949.1 True 4713 mRNA 0.45 13 11784803 11806444

Neighbor

gene id symbol gene type direction distance location
ormdl2 ormdl2,LOC101074775,LOC101464341 coding downstream 34194 11746307 ~ 11750609 (-)
cd63 NA coding downstream 53722 11716619 ~ 11731081 (-)
zgc:56699 NA coding downstream 84851 11696956 ~ 11699952 (-)
si:dkey-190g6.2 coq10a,LOC106917050,LOC103139137,LOC102221461 coding downstream 198833 11580293 ~ 11585970 (-)
racgap1 racgap1 coding downstream 253725 11521321 ~ 11531078 (-)
LOC120559301 LOC103366116 coding upstream 11706 11818150 ~ 11825217 (-)
LOC120558426 LOC102786184,LOC101465378,LOC100693664 coding upstream 29219 11835663 ~ 11841573 (-)
LOC120559814 NA coding upstream 38267 11844711 ~ 11848087 (-)
slc13a3 slc13a3 coding upstream 48606 11855050 ~ 11863694 (-)
LOC120558412 NA coding upstream 59263 11865707 ~ 11871461 (-)
G48911 NA non-coding downstream 169094 11607970 ~ 11615709 (-)
G48910 ankrd52 non-coding downstream 178189 11605733 ~ 11606614 (-)
G48907 ankrd52 non-coding downstream 184295 11600292 ~ 11600508 (-)
G48886 cs non-coding downstream 205815 11576539 ~ 11578988 (-)
G48903 LOC102783589,LOC107599367 non-coding downstream 211814 11564071 ~ 11572989 (-)
G49024 NA non-coding upstream 196823 12003267 ~ 12063255 (-)
G49084 NA non-coding upstream 313214 12119658 ~ 12121550 (-)
G49092 NA non-coding upstream 334491 12140935 ~ 12141414 (-)
G49112 NA non-coding upstream 340284 12146728 ~ 12147033 (-)
G49118 NA non-coding upstream 405299 12211743 ~ 12213541 (-)
LOC120558961 NA other downstream 276466 11503827 ~ 11508337 (-)
G48697 NA other downstream 1050916 10641405 ~ 10733887 (-)
G48523 NA other downstream 1758978 10024994 ~ 10025825 (-)
hipk1a LOC103359735 other downstream 1999562 9766311 ~ 9785241 (-)
c1qtnf12 fam132a other downstream 2031117 9727874 ~ 9753686 (-)
srxn1 srxn1 other upstream 79521 11885965 ~ 11891139 (-)
peds1 LOC104919928,LOC103354371 other upstream 152935 11959379 ~ 11979035 (-)
G49083 LOC103354491,LOC102226477,LOC108232148 other upstream 320442 12126886 ~ 12128425 (-)
dnmt3ba NA other upstream 340970 12147414 ~ 12169209 (-)
ppdpfa LOC104933328,LOC101073585 other upstream 414290 12220734 ~ 12223028 (-)

Expression


Co-expression Network